Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <----------DOF2                                                                                     ------>ZmHOX2a(1)                                                                                    --------->TOE2(3)                                                                                 ------->TEIL     ---------->DOF2                                                          --------->ANAC58 --------->ANAC58                                    ----------->GT1          --------->ANAC46 --------->ANAC58                                  ---------->DOF2            --------->ANAC58 ------->At4g35610                         <---------ICU4                  --------->DEAR3(1)   ----- ->RAV1(2)           <---------YAB1       <---------ATHB12            --------->MYB52(1)    <--------   cagaagcaaaagctataaacttgattatggtgaagaagtgcttaatcaattcacaaagttactaaaacaatctaacgcagacgcatcctttaaaacaaca  18731600                                     <----------DOF2                                <---------ATHB12                               --------->ANAC58                               --------->ANAC58                              --------->WOX13(1)          --------->ANAC58 --------->ANAC58          --------->ANAC58 --------->ANAC58       --------->ZAT18   ---------->DOF2  ---------->DOF2      --------->ANAC58       <------ZmHOX2a(1) ----->DOF2            --------->ANAC46  <---------HSFB2a(2)                      ------->TEIL     -- --ID1 <---------ZAT18 --------->ANAC58  --------->HSFB2a(2)        --------->ANAC46            -----   aagagaaagggcacgcatggattccaagaaagcaatcaactttctcgaggaacaaaaaaacccataatccaagggacgagaacgaattttgcagataaga  18731700                           --------->DAG2                          ---------->DOF2                      <---------YAB1                <---------RVE1(1)                                           <---------AHL20(2)               --------->ARR11(3)                                           --------->AHL20(2)               <---------ARR11(3)                           <---------TOE2(3)       --------->DAG2 <---------TOE2(3)             --------->ANAC58      <----------DOF2      ---------->DOF2 <---------TOE1(3)             --------->ANAC58     --------->TOE1(3)         -- ------->MYB52(1)  <---------YAB1                <----------ID1          --------->TOE2(3)   -------- ---->YAB1   <---------TOE2(3)                 ---------->DOF2      <---------MYB52(1)    ---------->DOF2   ataagggataaagttgagatttttatggtaaagggttctcgttataagaaaaagacgaaattgaggctctgttaacctttaatttaggggaagaaaggtc  18731800                                                    <-----------GT1                                               <---------TOE2(3)                     <----------DOF2        <----------CDC5                  <---------ANAC58                     <---------DAG2        <---------At4g35610               <---------ANAC58 -------->DOF2<------------------------ANAC81  <---------TOE1(3)    <---------MYB52(1)      ------->GAMYB --->GT1   <----------DOF2 <<<<<<<<<TBF1   --------->At4g35610     <----------DOF2  <----------DOF2   aaaaagaagaaaacttttctctgcttttcttcttcttgaaatttgcgctgaggtttaccacttggattcctttagtttttcttgagctttgcaacggaga  18731900                                                           <------------CBF                                                         *TSS                                                        <----------DOF2                                                       <---------ANAC58                                                       <---------ANAC58                                                  -------->ATHB1                                                  --------->YAB1                                                  <---------ICU4                                                  --------->ATHB12                                                  --------->ATHB51                                                  <--------ATHB1                          <---------REM1(1)      <---------ATHB51                        <------ZmHOX2a(1)        <---------YAB1                 >>>>>>>>>TBF1                   --------->ICU4              >>>>>>>>>TBF1                <------ZmHOX2a(1)          <------ZmHOX2a(1)    ---------->DOF2------------>ATHB5                       <----------DOF2   ------------------------>ANAC81   ---------->DOF2   <---------ANAC46    <---------ZAT6        ----   aggaagagaagaggaagaagaagaaaggatgtagaaagtgaaagaggaacaattattgcgttattgtttaatattcagtgtgaaatagacttttctaagt  18732000                     ------>NtERF2        <---------LBD16     <------ZmHOX2a(2)    <---------ARR14(2)    --------->ARR11(3)    <---------ARR11(3)                                                               ---------->DOF2    --------->ARR14(2)        <----------DOF2                                     <----------DOF2  --------->ANAC58  --------->ANAC58                                         --------->RAP2.6(3)  --------->ANAC58  --------->ANAC46           <---------YAB1               --------->MYB52(1) ----->MYB59        --------->ANAC58         <---------AHL20(2)          --------->AtMYB61    -------   aggcacgatctacggattacagacgcctctctcttttactcaagtttttatttttgtttgtattcagtttctataccacaacggctctaaaggttctaaa  18732100                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <---------AGP1               <---------ARR14(2)               --------->ARR14(3)               <---------ARR14(3)               --------->ARR11(3)               <---------ARR11(3)                                                                <---               --------->ARR14(2)                                                                <---              --------->RVE1(1)                                                                 -----      --------->TOE2(3)                     <----------DOF2                                     <----      <---------------AGL15                 <---------DAG2                                  <------MYB83      <----------DOF2                    <-----------GT1                                    <------MYB46(1)      --------------->AGL15         <------------------------ANAC81         <---------PCF5<---------WOX13(1)     <-----------------AGL3    <----------DOF2                       <------ZmHOX2a(1)  --------->ATHB12 --->DOF2  ---------->DOF2  ------->TEIL<-----------GT1           <------ZmHOX2a(1)    <---------YAB1   gaaacttactttaaaaagatcttaatcttgcatcttttttttttaacttttttgtttttggcactagaggaggaagatggaccacaattctgattggttt  18732200                                    ----------->GT1      <---------ANAC58              <------MYB83      <---------ANAC58              <------MYB46(1)  <------MYB83                   <---------ANAC58  <------MYB46(1)                <---------ANAC46                               --------->YAB1 <---------AtMYB61        <------MYB83                                         <---------YAB1 --------->MYB59          <------MYB46(1)                                    --------->YAB1 ---MYB83                <---------AtMYB61                                  <---------YAB1 ---MYB46(1)             --------->MYB59       ----------->GT1            --------->YAB1 ---->MYB59     ---------->DOF2  <---------AtLEC2                        <---------YAB1 -----AtMYB61--------->YAB1      <---------ANAC58     <-----------GT1 ------->TEIL             <-----   ggtttggttcttgtatcagaaagttgtttggtcttgcttggttataaactggtttaaaaccccattcacatgaatatgataatcatacttcgatgtcatt  18732300                                         --------->ZAT14                                         <---------ZAT14                                      <---------ANAC46    --------->ANAC46                                    --------->ZAT14     --------->ZAT6         --------->TOE2(2)               <-----------GT1      <---------ZAT14<------ZmHOX2a(1)           --------->TOE1(2)    <---------ZAT14          --------->YAB1        --------->YAB1             --------->YAB1      <-- ----YAB1   <----------DOF2 <---------YAB1 <---------ANAC46    --------->GLK1(2)        ---------->DOF2   gttgtcttcactagctttaacattcccattaccataagttcagtgaagtagaaggataacacgagaagctaagagaagaaacataagattgaaagtgata  18732400                                                       <---------O2                                                       --------->O2                 ------->TEIL                          --------->TGA1a              <---------ANAC46                         =============================MYC_MYB            <------MYB83                         ------->MYC3          <---------WOX13(1)      <---------ARR11(1)   <---------TGA1a        --------->ATHB12          --------->GLK1(2)  ----------->RAV1(1)       <---------YAB1          --------->ANAC58  <-------MYC3              <--------P    --------->ARR14(2)         --------->ANAC46  ------->MYC4             <---------ANAC58    <---------ARR14(2)         --------->ANAC58  ------->MYC2             <---------ANAC58        ---    --------->GLK1(2)------->TEIL ------->TEIL   <-------MYC2            <---------MYB46(3)     ----- --------ID1<------MYB46(1) --------->TOE1(2) --------->REM1(1)--------->At4g35610              <----   acaacaaatctgattggtgtatgtatcaaacacacgaatctatatgctacatgtgccacatgagtagcttcaaattggttgctcatggtcaaaaatatga  18732500  Previous    Next  AGI:  At1g50570.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55530.2); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55530.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55530.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN75215.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 18729903    to: 18731957    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g50575.1    Description:  lysine decarboxylase family protein. similar to putative lysine decarbxylase [Nicotiana tabacum] (GB:CAO91858.1); contains InterPro domain Conserved hypothetical protein CHP00730 (InterPro:IPR005269) Range:  from: 18732387    to: 18734077    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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