Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->MYB46(3)                     ------>ZmHOX2a(1)                  ------>MYB83               --------->HSFB2a(1)              --------->YAB1               --------->MYB46(3)        --------->At4g35610 ---------ARR11(3)------>MYB46(1)  <---------ZAT18 ----->DOF2    <---------HSFB2a(1) --------->ZAT18 --ID1         <---------HSFC1(2) <---------ANAC58 >ANAC58       --------->HSFC1(2) <---------ANAC58 ---------->DOF2     <---------ICU4         <------ >ANAC58--------->MYB52(1) ------->TEIL  ----------->RAV1(2) ------->TEIL   <---------ANAC55(2) -----   aaggtctgagtaacagaaccatcctgatgaaccattgtgtaccatctgcatcataaagaaatgaaacttgtgagcattacttaaaactcactaaatatga  18688900                                   --------->HSFB2a(2)                                   <---------HSFB2a(2)                                  <---------LBD16                                --------->ARR14(2)                         <---------DAG2                                --------->GLK1(2)               -------->ATHB1                                --------->ARR11(3)              --------->ATHB12     ---------->DOF2      <----------DOF2           <---------ARR14(2)              <---------ICU4      <---------AHL20(2)  ---------->ID1               --------->RVE1(1)              --------->GLK1(2)     --------->AHL20(2) ---YAB1                   ------>ZmHOX2a(1)             ---------->DOF2   <----------DOF2 ---->ARR11(3) -------->P --------->TOE2(3)<<<<<<<<<<<<<<<<<LFY<---------YAB1    --------->WOX13(1)   ttttgtagctttaaatctacccttgtttcctaaaaatctggaaactcacattggccagagaaagaatcattgaatcgctttttcaattaaagactcttat  18689000                               --------->RAP2.6(3)                             --------->GLK1(1)                             <---------GLK1(1)                             --------->CCA1(2)                               <---------ANAC58                            --------->ARR11(3)                            --------->ZAT18                            <---------ARR11(3)                           --------->ALFIN1                         <---------TOE2(3)                            --------->DAG2   ------>ZmHOX2a(2)                        ---------->DOF2                              ---------->DOF2  <---------At4g35610                   <------ZmHOX2a(1)   <---------ZAT18       =================================HOX2a_HOX2a               ---------->DOF2--------->MYB52(1)             <------ZmHOX2a(1)        --------->At4g35610    ------>ZmHOX2a(1)  <---------AHL20(2)------->TEIL      <---------TOE2(3) <---------ANAC58     ---   caagtcctacttaatgggaaaggatttaaagatatcggctatgcacttctcgctatgaattaaggagccagaaaagtgtgcgagtctgatctgagaacta  18689100                                                                                                -----                                                                                               <-----                                                                                             ------->GAMYB                                                                                            ---------                                                                                          --------->MYB52(1)                                                                                        <---------MYB52(2)                                                                                       --------->ANAC58               --------->YAB1                       --------->ETT(2)                   --------->ANAC58          <---------ANAC58                          --------->ZAT18                --------->ANAC55(2)          <---------ANAC58                    ---------->DOF2                      <---------ANAC58      <---------ANAC58                   ----------->TGA1                          <---------ANAC58      <---------ANAC58      --------->At4g35610    --------->ALFIN1                <---------ANAC55(2) ---------->DOF2            <---------At4g35610 --------->DAG2                     <---------ANAC46 ------>YAB1 --------->GLK1(2)      <------ZmHOX2a(1)      --------->DAG2         <-------TEIL-------   gaataaagacttgcgaatcagaaattgatgagcttacaggagaatgacgaaaggtggacagaaggcgagaagcgataacatcgatgcgtaagtaacgatc  18689200                 <------------------------ANAC81               ------>NtERF2               --------->LBD16                                           --------->WRKY38(1)      --------->ZAT14                                                    --------->WRKY45  <---------------AtSPL3                                    --------->GLK1(2)  <---------------AtSPL8                      ------>NtERF2<---------ARR14(2)  <---------KAN4(2)      <<<<<<<<<TBF1 --------->O2        --------->ARR14(2)          <---------GLK1(2) ->ZmHOX2a(2) --------->ANAC46         =====================bZIP_DOF   --------->REM1(2)    <-------- -ZmHOX2a(2) <---------LBD16<---------At4g35610  ---------->DOF2   ------>ZmHOX2a(2) ------->GAMYB  - >MYB46(3) --------->ARR14(2)          --------->TGA1a     <---------GLK1(2)      --------->MYB52(1)< -->MYB52(1)<---------ATERF1(1)<---------At4g35610       ----------->ARR10      <---------ATHB12  ---   ggagaatgtacagtctccgccattttcttcttctgcttctctcgtctcggccaaagcctcagattctgatctgtgttgactaatcaacagagtctgcgaa  18689300                                                              ------->MYC4                                                              ------->MYC3                                                              <-------MYC4                                                              ------->PIF4                                                              <-------PIF4                                                              <-------MYC3                                                              <-------MYC2                                                              ------->PIF5                                                              <-------PIF5                                                             <---------TGA1a                                                             <---------ANAC58                                                             <---------bZIP60(2)                                                             <---------O2                                                             --------->O2                                                             <---------ANAC58                                                             --------->TGA1a                                                             <---------ANAC46                                                             --------->ANAC55(2)                                                             <---------ANAC55(2)                                                            ------------>OsbHLH66                                                          ----------->HVH21                                                         <-----------HVH21                                                         <-----------------PIF3(1)                                                        ----------->HVH21                                                       ------->MYC4                                                       ------->MYC3                                                       <-------MYC3                                                       ------->MYC2                                                       <-------PIF5                                                       <-------MYC2                                                       <-------MYC4                                                       ------->PIF5                                                      --------->O2                                                      <---------TGA1a                                                      --------->ANAC55(2) <---------TOE1(3)                                    <---------O2 <---------TOE2(3)                                    >>>>>>>>>>HY5 -------------WRI1                                    --------->TGA1a    ------->MYC3 -------->MYB52(1)                                   <---------TOE1(2)   <-------MYC3 ---------DOF5.7(2) *TSS  --------->AGP1   --------->At4g35610------->MYC2      <-----------GT1<----- ------>DOF5.7(2)------->TEIL   <---------ZAT6      <---------ALFIN1  <---------ALFIN1  ------------>CBF   gttaacgatgaagacgatgaacttcacaggtctactgtgaaactcagataaatcccacgtgtcacgtgctctccacatgttttttctaattccaatttta  18689400                                                                               <-----------TGA1                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <-----------ARR10                                                                         --------->ARR11(3)                                       <---------ATHB12                  <---------ARR11(3)                                      --------->ARR14(2)                 --------->ARR14(2)                                      <---------ARR14(2)                 <---------ARR14(3)                             <---------WOX13(1)                          <---------ARR14(2)                            <------------CBF                             --------->ARR14(3)                           --------->ATHB12                              --------->AGP1                 --------->DEAR3(1)------------>CBF                     --------->RVE1(1)       <----------DOF2    <---------YAB1     *TSS                    ---------->DOF2 ------GT1    --------->ANAC46    ------>ZmHOX2a(2)             ------->GAMYB  <-----------HVH21   cccttgagacttttcttcgccatcgtttttgattgatcccaatcttcttagcttcttctctctcaaccctcaaaagatcttcgtcatctctgtattcaac  18689500                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                            <---------GLK1(2)                     --------->ANAC58                                          <---------YAB1                      --------->ANAC46 <-----                  --------->MYB52(1)<---------ZAT14                           --------->ANAC58 <-----         ------->TEIL               --------->ZAT14         <-----------GT1   --------->ANAC58 <-----      <---------YAB1         <---------GLK1(2)       --------->YAB1<---------ARR11(3)     <---------ANAC58   acatagtgatgaatcgagactaacaaaatcaaattctcttcactctgattcgcagtcatagtttaccaatttcttctaactcgcaagcaatggcttgcct  18689600                                                                                 --------->ARR11(3)                                                                                 <---------AGP1                                                                                 --------->AGP1                                                                                 <---------ARR11(3)                   <---------MYB46(3)                                            <---------ARR14(2)               <---------GLK1(2)                                                 --------->ARR14(2)             --------->LBD16                                                    <---------CCA1(2)            --------->HSFB2a(2)                                           <---------ARR14(2)      --------->KAN4(2)                                               <------NtERF2     <---------HSFB2a(1)    <---------ANAC58                         ------>NtERF2                <--     --------->HSFB2a(1)    <---------ANAC46                         --------->LBD16         <------- ----ANAC58 <---------HSFB2a(2)                                    <---------LBD16<------ZmHOX2a(2) ----ANAC46 --------------->AGL15                                 --------->MYB52(1)        <-------- ----ANAC58<---------LBD16  <---------ANAC58       <---------TOE2(3)--------->LBD16------>ZmHOX2a(2)-   tggaagaaaattctccagaattggttgaattcgtgtaagtatcgattttttctaatgtttttggtaactcccggcgaaacctagatctagttttctgatg  18689700                                                                                            <--------                                                                                          --------->YAB1                                                                                         --------->ICU4                                                                                         <---------YAB1                                                                                       --------->YAB1                                                                                      --------->ICU4                                        --------->LBD16                               <---------YAB1          <----------DOF2              --------->HSFC1(1)                          <---------YAB1 -------ANAC46 <---------ANAC46        --------->HSFB2a(2)            <---------ICU4--------->YAB1 --At4g35610   <---------ANAC58        <---------HSFB2a(2)       <-------TEIL    --------->YAB1 ---RAV1(1)    <---------ANAC58        <---------HSFC1(1)     --------->CCA1(2) <---------ZAT6      X -------->ALFIN1               <-----------GT1       <---------YAB1  --------->ICU4--------->ICU4 ---   ctgtgttgaattcttttgcgtttctcagttttttttcatttccagaaattttagtatgtttaagagatgcaattagtgcctagtgatgatgatgatgata  18689800  Previous    Next  AGI:  At1g50430.1    Description:  DWF5 (DWARF 5); sterol delta7 reductase. Identical to 7-dehydrocholesterol reductase (DWF5) [Arabidopsis Thaliana] (GB:Q9LDU6;GB:Q38930); similar to FK (FACKEL), delta14-sterol reductase [Arabidopsis thaliana] (TAIR:AT3G52940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41698.1); similar to sterol delta-7 reductase [Tropaeolum majus] (GB:AAR29980.1); similar to sterol delta-7 reductase DWF5 [Gossypium hirsutum] (GB:ABA01480.1); contains InterPro domain ERG4/ERG24 ergosterol biosynthesis protein; (InterPro:IPR001171) Range:  from: 18685600    to: 18689320    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g50440.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G22120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41702.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 18689445    to: 18691575    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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