Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->ANAC55(2)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                            <---------YAB1                                                    --------->TOE1(3)     <---------ICU4                                                    --------->TOE2(3)     --------->YAB1                                                   ----------->RAV1(2)   <---------YAB1      <-------                                              <----------DOF2   <---------HSFB2a(2)          <-------    ---------->DOF2                           <---------DAG2    --------->HSFB2a(2)   <----------DOF2 -------ANAC58       ----------->GT1        ------->TEIL------->TEIL     --------->ICU4   <----------DOF2 -------ANAC58    <----------DOF2         <---------ZAT18      <---------LBD16 <-----------GT1   tcttgtgaaagtgaatgtcactttggtaattttagtggttttgatgcactttaacctgaacctcttctggatgttattattatacgtgctttctttcttg  18665600                                             --------->At4g35610                    --------->ANAC58         <---------At4g35610             <---------ARR14(2)                    --------->ANAC46         <---------ZAT2                  --------->ARR14(2)                    --------->ANAC58    --------->At4g35610                <------MYB46(1)                --------->HSFB2a(2)   --------->YAB1                       <------MYB83 --ANAC58       <---------HSFB2a(2) <-----------GT1                       --------->MYB59 --ANAC58<----------DOF2           <-----------GT1                    --------->ATHB12              -   ttttgtttcatctttgttctgtaagcaagaccaatttttatcatctcagcttatttgcagtttagcacggtttgattaggttctgggttaatctcaggct  18665700                                                                                            <------MYB46(1)                                                                                            <------MYB83                                                                  --------->At5g28300  --------->AHL20(2)                         --------->ZAT18                        --------->ZAT6         <---------AHL20(2)                         <---------ZAT18              --------->YAB1                   --------->ATHB12     <-------TEIL        --------->ZAT14           --------->WOX13(1)                  <---------ICU4 <---------AHL20(2)      <---------ZAT14           --------->YAB1----------->GT1       --------->ATHB51 -------->AHL20(2) --------->YAB1                 --------->AHL20(2)                  --------->ICU4   tataaaattcatcaagctcaaaaatagtccactacaagaacatagaagaccattaatcaacattcaacagtaatttgtttctaatctaattatttggttt  18665800                                    <---------ICU4                                    --------->AHL20(2)                                    <--------ATHB1                                        <----------                                    <---------AHL20(2)                                 <---------ANAC58                                    <---------AHL20(1)                                 <---------bZIP60(2)                                    --------->YAB1                                --------->CCA1(2)                                   --------->ICU4                                <---------ARR14(2)                         ---------->DOF2             --------->YAB1            --------->LBD16                       --------->ANAC58         --------->LBD16              <---------LBD16  ------>ZmHOX2a(1)          ------>ZmHOX2a(1)  ----------->GT1   --------->ANAC46       <-----------GT1  <---------ANAC58     --------->YAB1    --------->ANAC46       <---------LBD16    <---------DEAR3(2) ----------->HVH21    <---------ATHB12   --------->ANAC58     <-----------GT1      ----------->GT1 --------->ARR14(2) <   tgttcaataatcctagcaaaaattcacgaaagagttaataattttgtaaccggaatcatagataggccggtttatccaaaccggatatgacctgtcctct  18665900                                                                      <---------CCA1(2)                                                                     <---------ARR11(1)                                                   --------->YAB1    ------->TEIL                                                  <---------YAB1     <---------ARR14(2)                                                --------->YAB1      <---------CCA1(2)                                        --------->ANAC58  <---------ANAC58                                        ----------->GT1--------->DAG2--------->ARR14(2)                                        --------->ANAC46  <---------ANAC58           <----------DOF2             <---------ANAC58           --------->ANAC58  <---------ANAC46      --------->ANAC58             <---------ANAC58           --------->ANAC55(1)  --------->WRKY38(1)--------->ANAC58            <------NtERF2               --------->bZIP60(2)  --------->ZAT18 <------NtERF2--------->ANAC46    --------->MYB52(1)                  <---------ANAC55(2) --------->ALFIN1 *TSS    <---------DAG2 -HVH21  <-----------HVH21  <---------MYB52(2) <---------YAB1<---------ZAT18 <---------ZAT18 -----------GT1        --------->ANAC46 --------->ANAC55(2) <------NtERF2  --------->ANAC46   attaacaaactggtcgcgagtctctaggcaactaaaacggacacgtaatatgataataaggcgtggactcgtatctctcggcactcactttctcgcgact  18666000                                                             ------>NtERF2                                                            --------->DEAR3(1)                                                           <------NtERF2                                                           --------->RAP2.3(1)                                                           --------->DEAR4(2)                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                                          <---------RAP2.3(1)                                                          ------>NtERF2                                                          --------->ABI4(1)                                                         --------->ANAC46                                                         --------->RAP2.3(2)                                                         --------->RAP2.3(3)                                                         --------->ATERF1(2)                                                         --------->DEAR3(1)                                                         <---------DEAR3(1)                                                         <---------ATERF1(2)                                                        --------->ATERF1(1)                                                        --------->DEAR4(2)                                                        --------->RAP2.3(1)                        <-                                                        --------->ERF1                             --                                                       <---------ATERF1(1)                         --                                                      <---------DEAR3(1)  <---------At4g35610------>ZmHOX2a(1)                                                      --------->ANAC46  --------->ANAC46  <----------                          ------>ZmHOX2a(1)          ------>ZmHOX2a(1) <---------LBD16    ---------->ID1            <---------ALFIN1                ------>ZmHOX2a(1)--------->At4g35610      <----------DOF2   cgtagtcgtcttctccacttcgatactcctctctcttgcctcgttcctcttgttcctcgccgccgctctattctacggctgtcttcttctttttcctctt  18666100                <-----------HVH21               <---------ANAC46                             ==============HOX2a_HOX2a               <---------ANAC58                             ------>ZmHOX2a(2)               <---------ANAC58                            ===============HOX2a_HOX2a              <-------TEIL                                 <------ZmHOX2a(2)           --------->At4g35610                            <---------ARR14(2)           --------->ZAT2  ----------->HVH21              --------->ARR11(3)           <---------At4g35610                            <---------ARR11(3)           <---------ZAT2<-------GAMYB                    <---------ARR14(3)          --------->ARR14(2)  --------->bZIP60(1)         --------->ARR14(3)          <---------ARR14(2)  <---------bZIP60(1)         --------->ARR14(2)        --------->LBD16 <---------MYB46(3)         <---------ARR14(2)                             --- ----------->HVH21     <---------RAP2.6(2)         --------->ARR14(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------At4g35610    --------->ZAT14             <------NtERF2    ------>ZmHOX2a(1)      ----------- ------->At4g35610    <---------ZAT14           <---------ANAC46 ----------->RAV1(2)     ------->MYC3 ---->ZmHOX2a(1)<-----------TGA1               <---------LBD16 <---------ALFIN1          <-------MYC3 -GT1 <---------LBD16 <---------ZAT18      <---------O2  <---------GLK1(1)       --------->ALFIN1 <--   cctctgaaaccggagctgcgtcagtgcggttgacatcaccgagagacatggcggaatcgagatcccctcctgtagcgaagaaggtggagcatgtgatgga  18666200              <---------TOE2(3)              <---------TOE1(3)           <---------MYB52(1)         <---------ANAC46         <---------O2         --------->O2         --------->TGA1a         <---------ANAC58         <---------bZIP60(1)         --------->bZIP60(1)                 --------->GLK1(2)         <---------TGA1a                    <---------ARR14(2)         ===============MYC_MYB             --------->ARR14(2)      ----------->TGA1                      <---------GLK1(2)      ----------->HVH21                ----------->TGA1    <------MYB46(1)                   --------->LBD16        ------>NtERF2    <------MYB83                     <---------ANAC58       --------->ANAC46    <---------ANAC58                 <---------ANAC46 <---------ALFIN1    <---------ANAC58                 --------->ANAC55(2)    <---------ETT(1)                   <-----   <---------DEAR3(1)                <---------ANAC55(2)    --------->LBD16                    <-----   <---------MYB46(3)      <---------YAB1 <---------YAB1------>MYB83<----------DOF2        <--------- ------>ARR11(3)  ----------->HVH21  <---------ANAC58 --------->AtMYB61             ----------->GT1 >HVH21  <---------ANAC58<---------ICU4----------->HVH21------>MYB46(1)        <---------ANAC46------ -------ARR11(3)<-------GAMYB       <------NtERF2     --------->MYB46(3) <---------CCA1(2) <---------ICU4   gatgttcggtgacgttagggttgacaattactactggctccgtgacgattctcgcaccaatcccgacatgctttcttatcttcgtgaagaaaatcactac  18666300                                               <---------bZIP60(2)                  <---------ANAC58                                               <---------ANAC46                     <---------ANAC58                                            ----------->TGA1                    <----------DOF2      <-----------HVH21                     ----------->HVH21                  <---------ANAC58 ----ZAT14                             <-----------HVH21                       <---------ANAC58 ----REM1(2)   <---------At4g35610<---------ANAC58                          <-----------GT1 --GT1<-----------TGA1 <----------DOF2----------->HVH21              <---------TOE2(3)       -------- --->ZAT14     --------->At4g35610<---------ANAC58  <---------YAB1   <---------TOE1(3)       <-------   actgatttcgtcatgtctggtgagtcttttcaagttgcctctgtcagtgacgttgtgatacttaggggattagggtttttagctttccttgttttcaatt  18666400                                    --------->AHL20(2)                                <---------YAB1                              ----------->GT1                        ------>MYB46(1)        ---------           <---------ANAC46 <---------ANAC58                         --------->ANAC58       <--------           <---------ANAC58 <---------ANAC58                         ------>MYB83        <---------MYB52(1)           <---------ANAC58<---------ZAT2            --------->YAB1  --------->ANAC46--------->At4g35610    <---------YAB1        --------->ANAC58          --------->AHL20(2)             <-----------RAV1(2) ------->AGL15            --------->ANAC58    ----------->GT1        --------->ANAC58<---------At4g35610 --------AGL15        <---------YAB1<---------AHL20(2)      <---------LBD16      --------->GLK1(2)   tggagtattagtgacttgttgattatgcaagcttgtgataaattagactggaaaataaaaattcagggaccaagcaatttgagaatcagctgtttgctga  18666500  Previous    Next  AGI:  At1g50370.1    Description:  serine/threonine protein phosphatase, putative. Identical to Phytochrome-associated serine/threonine protein phosphatase 1 (FYPP1) [Arabidopsis Thaliana] (GB:Q9SX52;GB:Q0WWV2); similar to ATFYPP3 (SERINE/THREONINE PROTEIN PHOSPHATASE), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G19980.1); similar to Ser/Thr protein phosphatase homologous to PPX [Malus x domestica] (GB:CAA87385.1); similar to Phytochrome-associated serine/threonine protein phosphatase (PsFyPP) (GB:Q8LSN3); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and Range:  from: 18662315    to: 18665642    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g50380.1    Description:  prolyl oligopeptidase family protein. similar to prolyl oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT1G69020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65970.1); similar to oligopeptidase B [Triticum aestivum] (GB:BAE97779.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65969.1); contains InterPro domain Peptidase S9A, prolyl oligopeptidase; (InterPro:IPR002470); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Peptidase S9A, oligopeptidase, N-terminal beta-propeller; (InterPro:IPR004106) Range:  from: 18665977    to: 18670146    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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