Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <xxxxxxxxx                                                                                       --------->SPL7                                                                                       --------->SPL1(2)                                                                                      --------->SPL1(1)                                                                                      <---------SPL1(1)                                                                                     <---------SPL7 -                                                                                     <---------SPL1(2)                                                                   <-------TEIL     <---------ANAC55(2)                                                            --------->ATHB12       --------------->AtSPL3                                                           <------ZmHOX2a(2)       <---------------AtSPL3                                                           <---------YAB1         <------------------SPL14                                                          --------->ARR11(3)     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   ------>ZmHOX2a(2)      <---------ARR11(3)    <---------ARR14(2)  -                               --------->MYB46(3)  --------->ARR14(2)           --------->ARR14(2)  -        ------->TEIL<-------TEIL  <------ZmHOX2a(2)<---------ARR14(2)          <---------GLK1(1)-----   cattgaaatgaatcgagtgaggttcgctcttgaacgatcgtattgctaatgcctatccaagatcattgattcatttctaacatatcccgtacggtctccc  18661900              ---------->DOF2             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           ------>ZmHOX2a(1)          --------->TOE2(3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        ------>MYB83        ------>MYB46(1)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     --------->HSFB2a(1)     <---------HSFC1(2)                                                               <---------AHL20(2)     <---------HSFB2a(1)                                                             <---------AHL20(1)     --------->HSFC1(2)                                                              <---------AHL20(2)  --------->MYB46(3)                                                                 --------->AHL20(2) xxxxxxxsmallRNA(i)                                                               --------->AHL20(2) -------->ANAC58                                                                 --------->AHL20(2) -------->ANAC58                                                             --------->AHL20(2) -------->ANAC46                                      --------->ANAC46    <----------DOF2     <------ZmHOX2a(1) ------>RAV1(1)        <---------ICU4           <----------DOF2   <-----------GT1<---------AHL20(2)   acaaacaaccttcctcaaaagttcaacatcacatagatttcgaaatgtgtctttagacacaatttgtttaacaagacttttaaataattttttttaggag  18662000               --------->ARR11(3)               <---------ARR11(3)                                               --------->AHL20(2)            --------->DAG2                                                  ----------->GT1           ---------->DOF2                                             ---------->DOF2        --------->YAB1                                              --------->AHL20(2)       <---------YAB1                                               <---------AHL20(2)     --------->YAB1                                             --------->AHL20(2)     <---------ICU4                                             <---------AHL20(2)    --------->ICU4                                              --------->AHL20(1) <---------AHL20(2)              ----------->RAV1(1)           --------->AHL20(2)           xxxxxxxxx --------->AHL20(2)             --------->MYB46(3)             <---------AHL20(2)         ---------->DOF2   tttttaattatcaaaaaggtcttactcaaattcaacaacacatatatcgaaatgtgtttttttaaaaaaattaaaaagaagaaaaaatactataaagaag  18662100                                                                       ---------->DOF2                                                                    --------->ANAC58                 <---------AHL20(1)                                 --------->ANAC58                 --------->AHL20(1)                        <---------AHL20(2)                 --------->AHL20(2)                        --------->AHL20(2)                 <---------AHL20(2)  <-----------HVH21    <---------AHL20(2)                --------->AHL20(2)  --------->YAB1        <---------AHL20(1)         <---------LBD16    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------------->AGL15  --------->ANAC55(2)  <---------TOE2(3)                  --------->AHL20(2)              --------->YAB1 xxxxxxxxxxxxxx>smallRNA(si3)  <---------YAB1             --------->AHL20(1)  ----------->GT1       <   gtttaagtatttgtggaattttatttaggtgttatcaattgtcacattcaagtagacaaataaaattaccaagaaaagaattgcaaaaacattgaaaatg  18662200                 --------->ARR11(3)              <---------TOE2(3)                                                        <---------AHL20(2)             ---------->DOF2                                   <-----------RAV1(1)     --------->AHL20(2)            --------->AHL20(2)                   <------------CBF                    --------->YAB1      --------->ANAC46                         --------->AHL20(1)             --------->ATHB12   --------->ZAT14                             --------->AHL20(2)             -------->HAHB4      ---   <---------ZAT18                             <---------AHL20(2)             ----------->GT1   -----   <---------ZAT14--------->CCA1(2)           <---------AHL20(2)             --------->ICU4    ------   <---------ARR14(2)                         --------->AHL20(2)             <---------YAB1--------->RVE1(1)   --------->ARR14(2)                     --------->ICU4      --------->ARR11(3) --------->AHL20(2) ---------ANAC46 <---------ARR11(3)   >>>>>>>>>GATA-1<---------TOE2(3)   --------->AHL20(2)--------->CCA1(1)   tgtagtatactccattaaagatttgtgtaatgaagtaatagataaaaattaaattgatgtttaatatgttgccaaaaaaatgattaaaaataaatatcca  18662300                                                                                                    -                                                                                                    -                                                                                                    -                                                           <---------MYB52(1)                       <                                                          <-------GAMYB                             -                             <---------ARR14(2)          --------->MYB52(2)                         <                             --------->ARR14(2)          <---------MYB46(3)                         -                            ------>MYB83                <-------TEIL                                <                            ------>MYB46(1)          <---------MYB46(3)                          <---          <---------LBD16 <---------MYB59            <------MYB83                               <---- ------>MYB46(3)         ----------------->AGL1      <------MYB46(1)                        <-------- ---->MYB52(1) --------->ALFIN1     <-------TEIL    --------->MYB59          xxxxxxxxxxxxxxxx>smallRNA(i) --->TOE1(2)   *TSS <------ZmHOX2a(1)            --------->ATHB12      <----------DOF2   <----------DOF2   acgaatagagtttggggatggaggaagaccaaatcgggttcgggtcgagattgtttggttcgttgtgtttcccctttctctctctctccctctttccccc  18662400              --------->MYB52(1)             --------->ZAT18             <---------SPL7             ----------->HVH21           <---------At4g35610         ---------->CDC5      --------->TOE1(3)     --------->ZAT6     ----------------->AGL1 -------->ANAC55(2) -------->ANAC46 -------->ANAC55(1) ---------ANAC55(2)                           <----------DOF2 -------->ANAC58                          <----------DOF2 ---------ANAC58                     ------>ZmHOX2a(2)                         <---------YAB1 -------->ANAC58                    <------ZmHOX2a(2)              ------>ZmHOX2a(2) ---------ANAC58<---------DEAR3(1) --------->ARR11(3)             <------ZmHOX2a(2) ------MYB52(1)--------->SPL7      <---------ARR11(3)            --------->ARR11(3) -----DAG2 --------->At4g35610     <---------AGP1                <---------ARR11(3) ---------AGL1------>NtERF2        --------->AGP1               --------->GLK1(1)                  --   ttacgtaaccctaagcggacggagcaatgctctgctagatctatctttctttcaattcttcaccagagatcgtcgagactcaccattgaaatcgaagaaa  18662500                                                        <------NtERF2                                                       <------NtERF2                                                       ------>NtERF2                                                      --------->RAP2.3(3)                                                      --------->RAP2.6(2)                                                      --------->DEAR3(1)                                                      --------->RAP2.3(2)                                                      --------->ANAC58                       <-------                       ---------->DOF2                --------->ANAC58             <---------TOE2(2)                  --------->DEAR3(1)                 --------->RAP2.3(1)           <---------TOE1(3)                  <---------ALFIN1              ---------->DOF2                    <---------TOE1(2)                 --------->MYB46(3)            <---------AHL20(2)                  <---------TOE2(3)              --------->ZAT14               --------->YAB1                   --------->GLK1(1)            --------->bZIP60(2)          ===================================HOX2a_HOX2a     ---------            --------->ANAC46             <------ZmHOX2a(1)           <------ZmHOX2a(2)  ---------->DOF2 ------->At4g35610--------->AtMYB61     ----------->GT1<---------RAP2.6(3)   <---------GLK1(1)    ---   cagcaccaatttccacttcaccaccgaaagagagagacagagaggataataaaaggccgccatggatttagatcaatggatttccaaggttaaagacggc  18662600                                                  <<<<<<<<<TBF1                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC58                                         <-------TEIL                                         ------->TEIL                                         --------->SPL7                                             -                                       <---------SPL7                                        <-------                                       --------->TOE1(2)                                     --------                                      --------->ANAC55(2)                                --------->HSFB2a(2)                                      <---------ANAC58                                   --------->LBD16                                      <---------ANAC55(2)                               <---------LBD16                                     --------------->AtSPL3                    <----------DOF2   <---                                     --------------->AtSPL8                   <---------ANAC58------- <---------ARR11(3)                  <---------------AtSPL3               <---------ANAC46   <------- --RAP2.6(2)                       <---------ARR14(2)                     <---------ANAC58 --------->LBD16 >RAP2.6(3) <------ZmHOX2a(1)      --------->ARR14(2)         <----------DOF2 <---------ANAC58<------ -------->RAV1(1)    --------->REM1(1)<---------ANAC58 <----------DOF2    <---------ANAC58--------->LBD16   caacatctctctgaggacgagcttcaacttctctgcgaatacgtacgccttcttcttctttcttctttcttctcttgcttgctttctcttccccgaatat  18662700                                                                <---------DAG2                                                        <-----------RAV1(1)   ------->TEIL                                       <----------DOF2 -------->AtLEC2                                 <---------ANAC58         <---------ARR14(2) --KAN4(2)                                     --------->ARR11(3)         ------->TEIL ->ARR14(2)                      <----------DOF2 <---------ANAC58--------->ZAT14 ----TEIL                      <---------------AGL15 <---------ANAC58     --------->ARR14(2) -->KAN4(1)                    --------------->AGL15 <---------ANAC58<----------DOF2 --ARR14(2)                    ====================================================================== ---KAN4(1)        <-----------ARR10      <----------DOF2       <----------DOF2   tcatgcatctacaaaaacccaattcttcgcttactcttttgagactttagagcttgctttgtggcactttactttgaatctggtctctctcccttactgt  18662800  Previous    Next  AGI:  At1g50370.1    Description:  serine/threonine protein phosphatase, putative. Identical to Phytochrome-associated serine/threonine protein phosphatase 1 (FYPP1) [Arabidopsis Thaliana] (GB:Q9SX52;GB:Q0WWV2); similar to ATFYPP3 (SERINE/THREONINE PROTEIN PHOSPHATASE), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G19980.1); similar to Ser/Thr protein phosphatase homologous to PPX [Malus x domestica] (GB:CAA87385.1); similar to Phytochrome-associated serine/threonine protein phosphatase (PsFyPP) (GB:Q8LSN3); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and Range:  from: 18662315    to: 18665642    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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