Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC46                           <----------DOF2   --------->ANAC58                  ----------->GT1            --------->ANAC58                 --------->DAG2             <---------ZAT18                                   <------ --------DOF2  ---------->DOF2    <----------DOF2                        <------MYB83         <------ -----ATHB12<---------TOE2(3)   <---------At4g35610<---------YAB1        <------MYB46(1)    <--------   ctttctcgtttattaagaaaaggtgactcctttctgctttcacttgcacgcttctcattgttgagccattctatttggtcttgtactccaagttgagcgt  18582000                         <---------ZAT18                      <---------ANAC58                      <---------ANAC58                    ------>MYB46(1)                    ------>MYB83                   --------->MYB55(1)                   --------->ORA47(1)                  ----------->HVH21                  --------->MYB46(3)   --------->YAB1 <---------MYB55(2)                                                <---------ICU4 --------->GLK1(2)--------->DEAR3(1)                                                --------->ATHB51 ---ANAC58        --------->DEAR4(1)                                      ------>ZmHOX2a(1) ---ANAC58       --------->DEAR3(2)            ---------->ID1  --------->MYB52(1)--------->YAB1 -ANAC46       <---------ALFIN1   <----------DOF2<----------DOF2   --------->At4g35610       <-------   gagaatcaaaatgctcaacaccgaccgtgctcttctcttttcccatcttgtctttattcagagggaaacggctgtcctcactagcattatttccatcacc  18582100             --------->ANAC58             --------->ANAC58                                                                     <--             --------->ANAC46                     --------->HSFB2a(2)        <---------MYB46(3)------          --------->DEAR3(1)               <---------AHL20(2)             --------->YAB1     --------         --------->DEAR3(2)            --------->AHL20(2)           --------->YAB1           <------- --ALFIN1--------->MYB46(3)     --------->YAB1    <---------HSFB2a(2)    --------->ICU4    <---------ATHB12   ttcagaactaaaccgacgcaattggctattccaagaataacttaaataatctctagaggcaatagcaccatgagaatgatggtttcttctcaaatgatct  18582200                <---------ARR11(3)           --------->ANAC55(2)                <---------ARR14(2)           --------->ANAC58                --------->ARR11(3)           <---------ANAC55(2)          <---------AtMYB61                  --------->ANAC58          <-----------RAV1(1)          --------->ALFIN1   <---------ZAT14     <---------TOE2(3) <-----------HVH21   <---------ZAT18    --------->YAB1   <---------AtMYB61   --------->ZAT14------>ZmHOX2a(2)  --------->ALFIN1 -------MYB52(1)<---------AGP1 --------->ARR14(2) >ZmHOX2a(2)    --------->ARR14(2)   <---------ANAC46      --------->MYB52(1) ->ARR11(3)   <---------MYB46(3)    <---------MYB52(1)   <---------MYB59 <---------ANAC58      <----- --ARR11(3)<---------ANAC46    <---------ARR14(2) --------->ATHB12       <---------ANAC58    <-------   gttagtatacttgtggtggatctataagattgggaaccggtgtggtcacgaatcactggcctaactaagcatttgtcttgctgcaatacaaaaccccatc  18582300                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                           ------>ZmHOX2a(1)          *TSS   ---------->DOF2    -----                                          --------->TOE2(3)        --------->ZAT14   <----------DOF2                                     <---------ANAC58         <------ZmHOX2a(2)   --------->GLK1(2)                  ------>ZmHOX2a(1)  <---------ANAC58        --------->ARR11(3)  --------->ARR11(3) ----CCA1(2)     --------------------->WRI1==========================HOX2a_HOX2a <---------GLK1(2) --ALFIN1<---------YAB1  >>>>>>>>>EIN3<----------DOF2        <---------ARR11(3)  <---------ARR11(3)--   tctggttccttcttattgtccttgtatacattgcaagtttctttcctcagttccaacgtccaagatcactgcaaaccaaaaaagattctttaattaaaaa  18582400                       --------->ANAC58                                        --------->ZAT14                       --------->ANAC58                                     <---------ZAT6         ---------->DOF2                                              --------->ARR11(3)   ----------->GT1     --------->ANAC55(1)                      --------->HSFB2a(2)  --------->HSFB2a(2)  --------->ANAC46                         --------->HSFC1(1)  <---------HSFB2a(2) <---------LBD16                           <---------HSFB2a(2) ------->CBF ---------->DOF2                                <---------GLK1(2)  <---------ZAT14 ------->GLK1(2)    <---------REM1(2)        ------------>CBF   <---------HSFC1(1)   caatctagaaaaaaagaaagaatacacggcataagacaaataccaaaaccaatgcctagatggattctagaagctctagagtaaactcaagaagaaacaa  18582500                                  ----------->HVH21                                 <-----------HVH21                             --------->GLK1(2)                              --------->At4g35610                   --------------->AGL15                      <---------HSFC1(1)                            <---------------AGL15                      --------->HSFB2a(2)                          ----------------->AGL1                  <---------GLK1(2)                                ==================================        <<<<<<<ZML2   <---------HSFB2a(2)     <------ZmHOX2a(1)    ----------------->AGL3   ---------     --------->HSFB2a(2)      --------->ZAT2 --------->ANAC46      ----------------->AGL2 <---------YAB1     <---------HSFB2a(2) <<<<<<<ZML2       <-----------RAV1(2)--------->DAG2  <---------GLK1(1)  --------->GLK1(2)   --------->HSFC1(1)   <---------LBD16   ---------->DOF2  --------->GLK1(1)------   caacaatctagaacaacatggattctagaactagctgtcacagtttcaggaaaccatttcccaaaaagtcccaatttcagaaatctgtgtttatcaatga  18582600                                                 --------->ANAC58                                                 --------->ANAC58                         ------->TEIL      ------>MYB46(1)                <-------TEIL               ------>MYB83             <---------At4g35610          <---------------AGL15                                 -----             --------->ZAT2              <---------MYB59                                        -----             <---------ZAT2              <---------MYB111(1)                                  -------             --------->At4g35610        --------->ANAC46                                      <------         --------->TOE2(3)              --------->ANAC55(2)  ---------->DOF2                  <------       ------->TEIL   <---------YAB1    <---------ANAC55(2)<---------TOE2(3)                 -------- =========================================================MADS_MADS                          <------- >WOX13(1)  --------->MYB52(2)          --------->ANAC55(1)<---------YAB1                 --------->DOF5.7(2) --->YAB1--------->TOE1(3)      --------->AtLEC2 ----------->GT1 <---------GLK1(2)        <---------MYB52(1)   caaaaaatgaaccttagctgcataatgaatctccatgaaaacacctaattcaagtaaaattaagaaagaatttctaggtattctcgtgattcgttaccta  18582700      --------->MYB52(1)   <---------At4g35610   --------->At4g35610  <---------TOE1(3)   --------->YAB1 ->MYB83   --------->ARR11(1) ->MYB46(1)--------->ARR14(2) -->TOE2(3)<---------GLK1(2) ---MYB46(2) <-------TEIL ---MYB59  <---------ARR14(2)                                                                -------- ->ANAC55(2)--------->CCA1(2)                                       >>>>>>>>>TBF1            -------- --ANAC55(2)--------->ARR14(1)                                  <------ZmHOX2a(1)     --------->ANAC46   atttaagctaacagatacggacaatattagttttgctcattccatgttaatatgttcagacttggaggaagaagaagatgagagaaactcgcgactcgcg  18582800                                                              <----------DOF2                                                             <---------DAG2                               <------MYB83               <-----------GT1                               <------MYB46(1)       <---------ANAC58                              <---------TOE2(2)      <---------ANAC46                              <---------TOE1(2)      <---------ANAC58                         -------                           <---------ANAC58          <---------RAP2.6(2)                      <------                           <---------ANAC58         ---------->ID1                  <----------DOF2 ->ANAC58                  <---------ANAC46     <----------DOF2                  <-----------GT1    - ->ANAC58             <---------GLK1(2) --------->ZAT6 <------NtERF2           xxxxxxxxxxxxxxxx>smallRNA(i)   actcgcgagagagagagagagaccgattgtcgtaggtttcgaactctaggctttggcgtcttaccttttagcccatcttgttttcactttcaaatgggcc  18582900  Previous    Next  AGI:  At1g50140.1    Description:  ATPase. similar to ATPase [Arabidopsis thaliana] (TAIR:AT3G19740.1); similar to hypothetical protein OsI_021458 [Oryza sativa (indica cultivar-group)] (GB:EAZ00226.1); similar to hypothetical protein OsJ_019820 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36337.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42023.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 18573403    to: 18582370    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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