Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ATHB12         <---------------AGL15         ------>ZmHOX2a(1)<------MYB83                                                        ------>ZmHOX2a(1)    --------->HSFB2a(1)   <------MYB46(1)                   --------->ZAT6            <---------ICU4    <---------HSFC1(2)   --------->MYB59          --------->ANAC58                    --------->YAB1    --------->HSFC1(2) --------->CCA1(2)          --------->ANAC58                   --------->ICU4 ------>MYB52(1)    ----------->ARR10           ---------->DOF2                      <---------ATHB51   taccgaagttcctacaatcagtgagatttggtaaggcttatacaaccagagaaagcaaattagcactaatttgatgaagtaagagccataatggtcctca  18563500           <---------RAP2.6(3)                               --------->KAN4(1)           --------->At5g28300                               <---------KAN4(1)          --------->RAP2.6(2)                               <---------KAN4(2)    ----------->RAV1(2)                                 --------->ANAC58    --------->ZAT2                                      --------->ANAC58   --------->MYB52(1)                                   --------->ANAC46   -------->P                                         --------->ICU4   ------>MYB46(1)                                 <------NtERF2   ------>MYB83                                   ------>NtERF2  --------->MYB55(1)                             <---------ETT(2) <---------MYB46(2)  --------->ARR14(2)          --------->ETT(2)         <---------ANAC46 <---------MYB111(1) --------->GLK1(2)        <-----------RAV1(1)      <---------MYB52(1) <---------MYB59     <---------ARR14(2) <---------WOX13(1)<------ZmHOX2a(1)  ---------->DOF2 <-------   aaacctacctggccgtaattgagaatcggagaacaagggctaattgaaatgtcgccataaggaacaatcttcccttgtgtaaagctctctccttgtctgc  18563600                                           <---------ARR11(3)                                           --------->ARR11(3)                                    --------->ARR14(2)                                    <---------ARR14(2)                                    --------->GLK1(2)              <---------AHL20(2)    <-----------ARR10                            <-----------GT1    <         <-------TEIL              <---------ARR14(1) ----------->HVH21   <---------At4g35610       < ----------AGL1           <-----------HVH21<-----------ARR10     <---------CCA1(2)   --------->ATHB12   atttggctacatacatataatctattggagtcagagcgaatccaagctcttcccatttgacattcgcatatttttcatctgtttcactgatttgatttca  18563700                                                                                     <---------ICU4                                                                                  --------->YAB1                                                                                 <---------YAB1                                                                              --------->GLK1(2)                                                                      <------ZmHOX2a(2)                                                                     <-----------HVH21           ---------->DOF2                             --------->ANAC46      --------->ARR14(2)         --------->AtMYB61                             --------->ANAC58  --------->LBD16       ----------->RAV1(1)               --------->AHL20(2)          <---------ARR14(2)      --------->ANAC46                   <---------AHL20(2)     ------->GAMYB<---------ARR14(2) ---------ANAC58                      ------->TEIL     --------->ANAC58<-----------RAV1(2) ---------ANAC58            ----------->GT1      --------->MYB46(3)  --------->ARR14(2)           ---   atgcatgcccaccaaaagaaaacagaaaatgagtaaaatgaatttaaatgaacaaacacgagataaccccagatcaggggattctaataactataaatct  18563800         <-----------GT1    ---------->DOF2   <-----------GT1 ------>ZmHOX2a(1)     --------->YAB1   <----------DOF2 <----------DOF2      <---------YAB1 <---------ARR11(3)           --------->ALFIN1 ------->ID1        --------->YAB1   --------->ARR11(3)<---------SPL7        <------ZmHOX2a(1)      -   gtccttttttttttcttctcatttatcataaaaagatgagacctttttataccttgtagtacgaagaggtgatgaagaaggagccatctatggagaaata  18563900                                                ------->MYC2                                                <-------MYC2                                                ------->MYC3                                                <-------MYC3                                                ------->PIF5                                                <-------PIF5                                               <---------ANAC55(2)                                               --------->ANAC55(2)                                               =============================bZIP_DOF                                               ================================================MYC_MYB                                               --------->O2                                               <---------O2                                               <---------ANAC46                                               <---------bZIP60(2)                                           <-----------HVH21                                           <-----------------PIF3(1)                                     --------->ZAT14                                     <---------ZAT14                                     --------->REM1(2)                                    --------->ALFIN1                      --------->At4g35610 *TSS --------->TGA1a                   <---------At4g35610   <---------ZAT6                   --------->At4g35610 <---------ANAC46                ---------->DOF2   <---------ANAC46                  <---------YAB1     ------->GAMYB             <---------ANAC46     <---------ANAC58        <------ZmHOX2a(1)           <---------MYB52(2)            <-----------------------TaNAC69(2) <---------TGA1a     <-----------TBP    --------->MYB46(3)           --------->ZAT14        <---------ANAC58     <-----------RAV1(2)     <---------WOX13(1)   <           <---------ZAT14        <---------ANAC55(1)  <---------LBD16    <---------ZAT6  <---------MYB52(2) --------->DOF2 =========================================bZIP_DOF<----------DOF2----------->HVH21<---   gagaaagcagtagtgaagtgaagcagaagaagagaggcgtgtagtggtcacgtggtttcaggagcgtctttttatagtgtgactgacaacaaacaaaccc  18564000                                                                 --------->ARR14(2)                                                           ----------->GT1                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                       <---------AHL20(1)         ===================                                                       --------->AHL20(1)       ---------->ID1    ---                                              <---------KAN4(1)  --------->GLK1(2)--------------->AGL15                          ---------->DOF2     --------->KAN4(1)  <---------ARR14(2)          <-------                      <----------DOF2        ---------->TaMYB80  --------->ARR11(3)       --------->ANAC46               <----------DOF2               <---------KAN4(2)  <---------GLK1(2) <----------DOF2<--- ---------YAB1 <---------DAG2         --------->ATHB12--------->AHL20(2)       <-----------GT1  <---- -------DOF2<---------ALFIN1   --------->GLK1(2)    --------->YAB1            <<<<<<<<<<GT-3b<-------   ttttgattccttctccacttttttcttttaaagaatttgttgatgggaatatactaataaattgtagaatcttcaactatttttctttttatacgaaggt  18564100                                            --------------->AGL15                                            <----------DOF2                                           --------->MYB52(2)                                         <---------MYB52(1)                                        <---------RAP2.6(3)                                --------->DAG2                            <---------At4g35610                  --------->AHL20(2) ===========================================================MADS_MADS    <---------ICU4 ------>ATHB12              --------->At4g35610                  <---------AHL20(2) --TOE2(3)           <---------AHL20(2)<---------MYB46(3)      <----------DOF2              --------- ----TEIL            <---------YAB1--------->ALFIN1     --------->DAG2--------->ATHB12  <---------ZAT14 ----P          <----------DOF2---------->DOF2        ---------->DOF2<---------AHL20(2) --------->ZAT14 --TOE2(2)---------->DOF2  <---------TOE2(3)=========================================================   tgatgggatggctaaagactttttttattaagctaaagtggccgttctttgttgagaaaaggtgtctttaattcattagtaccaatacattgcaccgaga  18564200                                    --------->YAB1                                   <-------TEIL                        --------->ZAT18                        <---------ZAT14                        <---------ZAT18                      --------->ATHB12                <-------                --------------->AGL15                       <---------YAB1      <-----------GT1         ----------->GT1--------->ZAT14                     <---------AHL20(2) --------->ZAT14  <---- >DEAR3(1)      <---------------AGL15                   --------->ANAC55(2)  --------------->AtSPL8 < ===============================MADS_MADS             --------->AHL20(2)  <-------TEIL <---------AHL20(2)   ctccgaatggagagtaaaccatatagtgcaatgcagtttcatagtaccgaaaacatttacatattattgataccgatacattgtactattttttttttct  18564300                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                          <---------CCA1(2)                                                                                         <---------ARR11(3)                                                                                         --------->AHL20(1)                                                    <---------AHL20(2)                   <---------AHL20(1)                                                    --------->AHL20(2)              <---------AHL20(2)                                                 --------->YAB1                     --------->AHL20(2)       <------ZmHOX2a(1)     --------->LBD16     ----------->GT1                    --------->AHL20(1)    --------->YAB1        --------->MYB52(1)    ----------->GT1                     <---------AHL20(1)    <---------ICU4  <----------DOF2             <---------YAB1                   --------->YAB1 --------->YAB1    --------->TOE2(3)       --------------->AGL15              --------->YAB1 ----GT1           --------->TOE1(3)      ----------------->AGL1             <---------AHL20(2) ------DOF2  --------->YAB1 ------->GAMYB ----------------->AG              --------->AHL20(2) ---------YAB1  <---------GLK1(2)    <---------AHL20(2)               <---------AHL20(2) --------->ARR11(3)   ttataatcaggataatcagaacctttacaaccggactatttttttccaaaatgataaatttttagtttttatttcatttttaataataaaatatatctat  18564400  Previous    Next  AGI:  At1g50110.1    Description:  branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6). Identical to Branched-chain-amino-acid aminotransferase 6 (BCAT6) [Arabidopsis Thaliana] (GB:Q9LPM9;GB:Q42148;GB:Q8L961); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT1G50090.1); similar to Os03g0231600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049461.1); similar to branched-chain amino acid aminotransferase [Hordeum vulgare subsp. vulgare] (GB:CAE00460.2); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II Range:  from: 18561685    to: 18563942    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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