Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                --------->YAB1                                                                               <---------YAB1                                                                             -------->ATHB1                                                                             <---------ICU4                                                                            --------->ICU4                                                                            <---------AHL20(2)                                                                            <---------YAB1                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                   --------->ANAC58 ------>ANAC58                                            <----------DOF2--------->AHL20(2) ------>ANAC58                                       ---------->DOF2     <---------AHL20(2) --GT1                                              --------->YAB1 --------->ANAC58   aagtaaacatataaacaagtagacatataaaaacatatatttcaaaattttcaataaaagcttttagtcacacaaaaaattattaaaattttaaaaatag  18511200                                                                                   --------->ANAC46                                            <------ZmHOX2a(1)                      --------->ANAC58                                           ----------->GT1                         --------->ANAC58                                      --------->YAB1                         --------->AHL20(1) <----                <-------TEIL   <----------DOF2                            --------->AHL20(2)    -----   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------TOE2(3)             --------->AHL20(2)   --------   actcacgcgtagtttgggttcataacctagtttcttttaaaaataaggatatatactaaaaattcaaaaaaaaaaaaaatatactaagccatccattata  18511300                                         <----------DOF2                           --------->AHL20(1)                           <---------AHL20(1)                    --------->AHL20(2)   <---------DAG2       <-----------GT1   --------->AHL20(1)        <---------ANAC58                         <--------   --------->ARR11(3)    <---------AHL20(1)        <---------ANAC58                       --------->ARR11(3)   <---------ARR11(3)   --------->AHL20(2)   <---------AHL20(2)                           <---------ARR11(3) -----AHL20(1)      <---------AHL20(2)<-----------GT1     <---------YAB1             --------->AHL20(2) ---->AHL20(1) ----------->GT1    <---------ARR11(3)   <---------YAB1  ----------->GT1---------->DOF2 ->AHL20(2)  ---------->DOF2      --------->ARR11(3)   ----------------->AGL3   --------->AHL20(2)   tattagattttacagaaaagaaataaatatatattagattttactttttatttgggtatcatttttggataaaacgaaaatataaaataaaagacctaaa  18511400                                                              <---------ARR14(2)                    <                       --------->ARR11(3)             --------->ATHB51                           ----                       <---------ARR11(3)             --------->ATHB12  <----------DOF2          <---                   ---------->DOF2        ----------->RAV1(1) --------->ARR14(2)                <----         --------->GLK1(1)               --------->MYB46(3)<---------ANAC46                   <------ -MYB59  <---------GLK1(1)       ---------->DOF2      <---------ICU4    <---------DAG2        <------   aattcaaattgaaatccagattaaagacctcttaagaaagacaacaacagattgcataattgcgaatagggttcctttatcgaaattttgaaatttaagg  18511500                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                 --------->AHL20(2)        --------->DAG2                          --------->AHL20(2)       ---------->DOF2                      ----------->TBP                <-----------RAV1(2)   <---------YAB1                           <---------AHL20(2)            <-------TEIL --------->YAB1                          <---------AHL20(1)            <------MYB83            <----- ---------YAB1                           --------->AHL20(1)            <------MYB46(1)      <------NtERF2 ----->ARR11(3)                          <---------ARR11(3)            <---------DEAR3(2)   ------>NtERF2 ------ARR11(3)                         <-----------TBP   <---------AHL20(2)        ------->TEIL --ZmHOX2a(1)                  ---------->DOF2  <---------AHL20(2)    --------->MYB59     <---------ANAC58 ---TOE2(3)                ----------->GT1----------->TBP --------->AHL20(2)<---------TOE1(3)  <----- ---TOE1(3)                <---------ANAC46 --------->AHL20(2)      <---------MYB52(1)    <---------ANAC58   atattataaaaaagttgaaatggaatgaggcgttaaatcgcaatatataaataaataaatataaatttcggttcggttcaggtatgaatcgggcgggctt  18511600                                 ------>MYB46(1)                                 ------>MYB83                                 --------->MYB52(1)                               --------->AtMYB61                               <---------MYB59                            ------>NtERF2                           ----------->HVH21                           --------->DEAR3(1)                          ------>NtERF2                          <------NtERF2                          --------->RAP2.3(1)                          --------->ORA47(2)                         --------->LBD16                         <---------RAP2.3(1)                        <---------RRTF1(2)                        <---------DEAR3(1)                  <---------AHL20(2)                 --------->AHL20(1)                 <---------AHL20(1)                       <---------ZAT2                 --------->AHL20(2)                       <---------HSFC1(2)     --------->ANAC58   <---------RAP2.6(2)               --------->HSFC1(2)     --------->ANAC46   <---------RAP2.3(2)               <---------HSFB2a(1)     --------->ANAC58   <---------ANAC46                  --------->ZAT2  <---------MYB52(1)    <---------RRTF1(3)               --------->ANAC58  --------->ARR14(2)   <---------LBD16                   --------->ANAC58  <---------ARR14(2)<------------CBF      ------>ZmHOX2a(1) -----DOF2       <---------AHL20(2)    *TSS          --------->ANAC58         --------->ATHB12  <---- ----DAG2 --------->AtLEC2--------->ATERF1(1)        --------->ANAC58 ------------------------>ANAC81   ttccgatacgccttgcaaataaaattgcggcgaccaaactgttcctcttcttctccagcaagcttcgaagagaaggaagaagattggagaagaatggata  18511700                   <---------ATHB12                                                      --------->KAN4(2)                  ------>MYB46(1)           ------>ZmHOX2a(1)                           <---------ICU4                --------->AtMYB61       --------->ARR14(2)                              --------->KAN4(1)               --------->MYB46(3)       <---------ARR14(2)                  <---------MYB52(1)        <---------YAB1       <---------ANAC58                              <---------MYB52(1)      <---------ICU4         <---------ANAC46                       ---------->DOF2     <---------KAN4(1)      --------->YAB1         <---------ANAC58 --------->REM1(1)   --------->ANAC46  --------->LBD16     <---------ATHB12    <-----------HVH21 --------->TOE1(2)  --------->MYB52(1)   --------->HSFB2a(2) <---------ANAC58 ------>MYB83          --------->GLK1(2)     ---------->DOF2 --------->MYB52(2) <---------ANAC58----------->RAV1(1)   --------->GLK1(1)    <---------MYB52(2)<---------MYB46(3) -----ICU4  --------->MYB46(3)         <---------GLK1(1) <---------ZAT14  <---------DEAR3(2)  -------   atggcgaatcatcatccaccaacaattcgtcgcgtccatgggaatcctacaataccgtcttcactaacgcgaaagccggtttgttcccgattattcccca  18511800                                    <---------ANAC58                                    <---------ANAC58                                    <---------ANAC46                                 <----------DOF2                             --------->ARR14(2)                    <---------ANAC58                             <---------GLK1(2)                     <---------ANAC58                             <---------ARR14(2)                    <---------ANAC46                    <---------ARR14(2)                           --------->ARR11(3)      <-----------GT1    <---------LBD16             --------->LBD16                        <-------- <---------ZAT6     --------->ARR14(2)              --------->HSFB2a(2)                     --------- -->LBD16   <----------DOF2 <------ZmHOX2a(1)       <---------HSFB2a(2)                 --------->WRKY38(1)   atagtgtttttcttctttagcaaattttcaggattctttcgtgaattgtttcttccagagttcaaaatttcttgaaaattgatcaattcgttgatcatgg  18511900                                                               --------->YAB1                                                        --------->LBD16                                                       <---------ANAC46                                                       <---------ANAC55(2)         <----------DOF2                                                       --------->ANAC55(2)      ------->TEIL     --------->WRKY12                            --------->AHL20(2)     <---------AHL20(2)     ----------->HVH21                           <---------AHL20(2)  --------->TOE1(3)             <-     --------->WRKY38(1)                        --------->AHL20(2) <---------ARR11(3)             <-- <---------YAB1                               --------->ARR11(3)   --------->GLK1(2)           <----- -ICU4                                        <---------ARR11(3)   --------->ARR11(3)        -------- >ATHB12      <----------DOF2    <-----------RAV1(1)  <---------LBD16--------->TOE2(3)   --------->ATHB12   gttatagttgactggtctttgaacatatttcttatgtgttgttttgaagatttaattgcggaatatcaaaatcttaaatttgcatctttagttattgatt  18512000                                                                           ---------->DOF2                                                               --------->At4g35610 --------YAB1                            ------->TEIL          <---------At4g35610 -------TOE2(3)                     <---------ANAC46           <-------GAMYB ----WOX13(1)                <---------HSFC1(2) <---------MYB52(1)   ---------->DOF2 ->ATHB12                    --------->HSFC1(2) ------>ZmHOX2a(1)----------->HVH21     <-------GAMYB-   gatgtttgagttaaatttctaaactcgtcgatgtttctgtgtgtatgttccttaggtatggagggagttgacaaagagaaagtccagagggttgtctatg  18512100  Previous    Next  AGI:  At1g49980.1    Description:  similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.2); similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to hypothetical protein OsJ_011272 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27789.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63978.1); similar to hypothetical protein OsI_012241 [Oryza sativa (indica cultivar-group)] (GB:EAY91008.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126) Range:  from: 18511639    to: 18516840    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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