Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                          --------->MYB46(3) --------                                                                         --------->ANAC58    <-------                                                                         --------->ANAC58    --------       <-------TEIL                                                   --------->At4g35610    <------- >ANAC58                          --------->At4g35610               <------ZmHOX2a(1) <---------At5g28300 >ANAC58                       ---------->DOF2                <---------At4g35610    <-----------GT1 >ANAC46          <-----------GT1 <---------At4g35610     --------->ARR14(2)       <----------DOF2 ->TaNAC69(2)<----------DOF2<----------DOF2               <---------ARR14(2)    --------->LBD16   <--   tttaccaggtccatgctttataactccagactttaaagctgactcttcttcttgagtccatttctgcttaggagcacccatcccgatttacggtctgctg  18500400                                                  --------->YAB1                                                 <---------ATHB12   --------->ANAC58                             ------>MYB46(1)   --------->ANAC58       --------->ANAC55(2)   ------>MYB83 ---------->DOF2          <---------ANAC55(2)  --------->WOX13(1) --ZAT2            ----------->RAV1(1)  --------->ANAC58                                            < ->At4g35610    <---------HSFB2a(2)     --------->ANAC55(2)                       <----------DOF2   - --ZAT14     <---------MYB52(1)         <---------ANAC55(2)            <---------AHL20(2)         --- ->ZAT2      --------->ARR14(2)         --------->ANAC58               --------->AHL20(2)     <------ --At4g35610 <---------ARR14(2)         --------->ANAC46  <---------TOE2(3)       <---------DAG2  <-- ---------HVH21 --------->HSFB2a(2) <-----------HVH21    ---------->DOF2   ----------->GT1  <-------GAMYB   tgtcaaagcaagtccgttctgcaacaatacatatcaaatgtcacgaaaccaatcagaactaaagtttctacataaaaatgtaaactttttcttcagttgt  18500500                                                             --------->TOE2(3)                                                             --------->TOE1(3)                                                          --------->GLK1(1)                                                          <---------GLK1(1)           <---------ICU4                                <---------ARR14(2)        --------->YAB1                               <---------LBD16 ---------ZAT18                      --------->TOE1(3)   --------->ARR14(2) -------->ZAT18                      --------->TOE2(3)  <------ZmHOX2a(1)              --------->LBD16 ------>At4g35610            --------->YAB1          --------->LBD16                 --------->ANAC46 ---REM1(1)--------->YAB1    ----------->GT1        <---------ANAC46       <---------YAB1 -------At4g35610    ----------->RAV1(1)            <---------TOE1(1)  <---------GLK1(2) ----------->RAV1(1)   agctcacaattcatcatcaaataccacagaatagtaaaaccctaattccctgttccgaggaaaccctaacatagattatcaaactataccgcagcaatag  18500600                                                                                  --------->YAB1                                    --------->ZAT14                               --------->HSFB2a(2)                                    <---------ZAT14                            <----------DOF2                      --------->MYB46(3)                                    <---------MYB52(1)           --------->ANAC46       --------->ANAC46                     --------->ARR14(2)           --------->ANAC58 ------>MYB83  ---------->DOF2              --------->GLK1(2)           --------->ANAC58 ------>MYB46(1)                            <---------ARR14(2)   ttcagaaactaagacgcaatagcaaacaccaacttcacatcactgaaagatgccgaaactcaaaccctagaaaaatccgttctttcagaatgaagcctaa  18500700                                                                                     --------->ANAC58                                                                                  --------->KAN4(2)                                                                                <---------ATHB12                         ---------->DOF2                           <------ZmHOX2a(1) --------->ANAC46                      <---------HSFB2a(2)                          ====================HOX2a_HOX2a               --------->ANAC46                        --------->YAB1      --------->GLK1(2)    <----            --------->ARR14(2)                     ====================================HOX2a_HOX2a            <---------ARR14(2)                     <------ZmHOX2a(1)   >>>>>>>>>TBF1 --------->ANAC58          <---------KAN4(2)          --------->At4g35610     <---------ZAT14    <------ZmHOX2a(2)   tctcatgctgagaatatacacaatcgagaaagaagaaacagatgaattcaccaggaatcagagtttagaggaagaagaatcgatcattcgcaataccaat  18500800                                                                                             <-------                                                                                             --------                                                     <---------ZAT6                   ------->TEIL                                                    <---------TOE1(3)               ------->GAMYB                     --------->GLK1(1)  *TSS        <---------TOE2(3)            --------->MYB52(1)              <---------ARR14(2)       <---------At4g35610              --------->ARR14(2)  ---------              --------->ARR14(2)       --------->At4g35610              <---------ARR14(2)  <--------    <---------AHL20(2)   --------->HSFB2a(2)  --------->DAG2    --------->ARR14(2) <---------MYB52(2) -----DAG2<---------LBD16<---------HSFB2a(2) ---------->DOF2    <---------ARR14(2)>>>>>>>>>MYB98    <   ttttgtttaatctctggattcagatttcgagacgcttgggaagcagaaaaagttagggttaatgcgaatacaaggattcagagtaacggacctccgtcaa  18500900      --------->LBD16     <---------RAP2.6(2)    <---------LBD16                <-----------GT1 <---------At4g35610           <----------DOF2 --MYB52(1)                 <---------TOE1(3) ---->CBF                   <---------TOE2(3) >LBD16<------NtERF2     <---------ATHB12                                             ---------->DOF2 ---HVH21              --------->WOX13(1)                   ---------->DOF2  --------->MYB52(1) ---------YAB1       ------------>CBF              --------->MYB52(1)    <-----------GT1   ttctgatgcggcaaaccgcttagaccaattaagctttaaacgcgttttttcacaaacggccttaaaacgcgttttttacaaacggccttaaaacgcgttt  18501000                                                                            --------->AHL20(2)                                                                        ---------->DOF2                                                                     -------->HAHB4                                                                     --------->YAB1                                                                    <---------YAB1               <---------AHL20(1)                                   --------->ICU4               --------->AHL20(1)                                 --------->YAB1               <---------AHL20(2)                                 -------->HAHB4              --------->YAB1                   <-----------GT1    <---------ICU4              --------->AHL20(2)           --------->AHL20(2)    <---------ATHB51             <---------YAB1    --------->AHL20(2)                --------->ICU4    --------->ANAC58           <---------AHL20(2)              --------->YAB1    --------->ANAC58          <---------YAB1<---------ICU4 <----------DOF2----------->GT1    --------->ANAC46       <---------YAB1  <---------AHL20(2)--------->AHL20(2)            --------->LBD16   ttgtttacgctagttattatattctgaagattataaattgtctaaatatttacaaattcaacttttaataatgataaagaaaatatcaaattccccaaat  18501100                                --------->YAB1                         <---------AHL20(2)                         --------->AHL20(2)                         --------->AHL20(1)                         <---------ARR11(3)                    --------->AHL20(2)                  ----------->GT1                                   --------->ANAC58            <---------WOX13(1) <---------YAB1            <------ZmHOX2a(2)           >>>>>>>>>ARR2 --------->ARR11(3)             --------->ARR11(3)           >>>>>>>>>ARR1 <---------AHL20(1)             <---------ARR11(3)    <------MYB46(1)          --------->ATHB12  <---------AHL20(2)  ----------->HVH21   --------->ANAC46         <---------YAB1 --------->AHL20(2) --------->ANAC46         --------->ANAC58 <---------ZAT6   --------->ANAC58         --------->ANAC58     <-----------GT1     <---------YAB1 ----------->GT1  --------->ANAC58         --------->ANAC58  <---------ICU4   <------MYB83       <---   gaagtgttaatatgattgtcaagaaaatatattatcaaaactaatacgcagtgacccagatcatatttacacgaacaatttggtttatgtttgaaagttt  18501200                                                                                             <-------GAMYB                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <--------P                                                                                         <------MYB83                                                                                         <---------MYB46(3)                                                                                         <------MYB46(1)                                                                                        --------->ALFIN1                                                                                        <---------AtMYB61                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                     <------NtERF2                                                                                     --------->ALFIN1                                                                                     <---------AtMYB61                                                                                   --------->ALFIN1                                                                                 <---------ANAC46       --------->AHL20(2)                                        <---------AHL20(2)<---------ANAC46   --------->ICU4                                                <---------YAB1  <---------MYB46(3)   <---------YAB1          ----------->GT1                     --------->CCA1(2)<---------AtMYB61 ----------->GT1  <---------YAB1                     <-----------RAV1(1)      --------->ALFIN1 <---------MYB46(3)--------->ATHB12                 --------->ARR11(3)        <-----------RAV1(1) ------AtMYB61    --------->ICU4         --------->AHL20(2)   <---------ARR11(3)--------->ALFIN1    <   tggtggtgattaaaaatttgatgattaagtggtattttgaacataaaatacaaatatgttgctagatataattcagaaatgtgtggtggggtggtagttg  18501300  Previous    Next  AGI:  At1g49950.1    Description:  ATTRB1/TRB1 (TELOMERE REPEAT BINDING FACTOR 1); DNA binding / transcription factor. similar to ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67580.1); similar to ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67580.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO63990.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Telomere repeat binding factor (InterPro:IPR013127); contains InterPro domain Homeodomain-related; (InterPro:IPR0122 Range:  from: 18497783    to: 18500840    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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