Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ------>ZmHOX2a(2)                   <---------RVE1(1)                   <------ZmHOX2a(2)                             --------->YAB1                  <---------ARR14(2)                    -------->ATHB1                  --------->ARR14(2)                    --------->ATHB51                  <---------ARR11(3)                    --------->ATHB12                  --------->AGP1                       <---------AHL20(2)                      ------                  <---------AGP1                       <---------ATHB51                        <-----                  --------->ARR11(3) ----------->GT1   --------->ICU4                          ------    <---------AHL20(2)        <---------YAB1           <---------YAB1                          ------    --------->AHL20(2)        <---------------AGL15    --------->AHL20(1)                      <-----   --------->AHL20(2)<----------DOF2----------->GT1  --------->YAB1                            <----- >GT1            <---------CCA1(2)---------->DOF2   --------->ICU4  <---------ICU4>>>>>>>>>>WRKY63 <-   atagatttaattttgaatcagatcttttagttataaaaaaggaaaattttagcaaaaattattgaattcataaatacactaatttgactatgagcaatat  18473300            <---------AHL20(2)            <---------AHL20(1)            --------->AHL20(2)         <---------AHL20(2)         --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(2)        <---------AHL20(1)                          --------->At5g28300 --->AHL20(2)                                      ----------->GT1           --------->MYB52(2) ----AHL20(1)                                 --------->ARR11(3)           <---------MYB52(1) --->AHL20(1)                                --------->YAB1            <---------ANAC58 --->ARR11(3)                          ----------->GT1                 <---------ANAC58 ----ARR11(3)                       ------->TEIL--------->YAB1       --------->ARR11(3) ----AHL20(2)                     --------->YAB1<---------ICU4     ------->TEIL               <------ ------TEIL --------->AHL20(1)   <---------ATHB12 <---------YAB1<---------YAB1                <------   attcatacaattaatttattgtttctcggtattcaatgaaactgcaaaaatcatggtaatttgtttatgaatttcttgttagttttgtttattagggctt  18473400                                                       <---------CCA1(2)                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR14(3)                                                   <---------ARR14(2)                         -------                           <---------AHL20(2)      <-----------ARR10                          -------                  --------->GLK1(2)                <---------ARR14(3)                ----------->GT1                  <---------ARR11(3)               <---------ARR11(3)                --------->ANAC58                  --------->ARR11(3)               --------->ARR14(2)                --------->ANAC58     ---------->DOF2      --------->AHL20(2)       --------->ARR11(3)             ---------->DOF2   - ---ANAC58       --------->RVE1(1)             ---------->DOF2               ----------->GT1  ------- ---ANAC58     --------->AHL20(2)   ---------->DOF2<---------AGP1          ---------->DOF2  ---------   gaaacttgaaagaaaaaaaaaatctatataaaatgaacaaaagaatatagaaagatcttatcttactgtggaaactggaaagtagaaaggcaataaacga  18473500                                                                                    <---------YAB1       ------>ZmHOX2a(1)                                                            <---------TOE2(3)     ----------->RAV1(2)                                                          <---------AHL20(2) <-----------GT1                       ---------->DOF2                            --------->AHL20(2) -->ANAC46                   --------->AHL20(2)                               <---------AHL20(2) -->ANAC58               --------->AHL20(2)                                   --------->AHL20(2) -------->AHL20(2)    <---------ANAC55(2)            <---------KAN4(2)        <---------AHL20(1) -->ANAC58     --------->TOE2(3)---------->DOF2     --------->YAB1            --------->AHL20(1) >MYB52(1)     --------->YAB1--------->YAB1       <---------TOE2(3) --------->AtMYB61    <-----------GT1   aattaactcctgatcatccataatacataaattataaagaataaagaagattaagaataaacatccaaaaccaaaactaattaattaatattaaacatat  18473600                                                                     --------->YAB1                                                                  --------->YAB1                                                                  <---------ICU4                                                                 <---------YAB1                                                                 --------->ICU4                                                               --------->YAB1                                                             --------->AHL20(2)                                                       ----------->GT1           <---------ARR11(3)                       ---------->DOF2                 --------->ANAC58          --------->ARR11(3)                   <----------DOF2                     --------->ANAC58   ------------>CBF              ---------->DOF2  ----------->GT1       ---------->DOF2--------->ICU4               ----            <---------------------WRI1 ----------->GT1--------->DAG2<---------YAB1--------->CCA1(2)   agtttagggcaaaattcaaagctttcaaagtcgatgtaaaattgtaaatctctgaaaaagcaaaataataataataaacaatagatatactaagaaactt  18473700                           <---------GLK1(1)--------->ANAC46                           --------->GLK1(1)--------->ANAC58                         <------ZmHOX2a(1)  --------->ANAC58               ----------->GT1             *TSS<---------ALFIN1   --------->O2              --------->DAG2       <---------ARR14(2)             <---------ALFIN1   <---------ANAC55(2)<---------LBD16    --------->AtMYB61      <---------ALFIN1            ------>ZmHOX2a(1) ------>DOF2 ---------->DOF2       --------->ARR14(2)      <-----------GT1      --------->DEAR3(1)   aaatcacataaacaaaaaagttactcaggaaaccccaaatccacaaaccccacttgcaatttctccccacatctctctcccatcgccctctctcctctct  18473800                         --------->DAG2                        ---------->DOF2                 --------->ANAC58                 --------->ANAC58                     ---------->DOF2           <---------DEAR3(1)                       <---------YAB1<----------DOF2          <---------At4g35610                       <---------HSFB2a(2)          --------->At4g35610       <----------DOF2 --------->HSFB2a(2)              ---------->DOF2   ctcgtcttcttcggctgtgaagcaaataaagcaaattcctttcttcgatttgttctgaaagttttcaactttggtgagtttggagaagaaagaagacaca  18473900                                                       <---------ZAT14                  --------->ZAT2                                                       <---------At4g35610             ------>MYB83                                                       --------->At4g35610     --------->ANAC58                                                    --------->At4g35610        --------->ANAC58 <----                                                    <---------At4g35610        --------->ANAC46<-----                                                   <---------MYB46(3)   ----------->HVH21      ------                                                <---------MYB46(3)      --------->WRKY12<---------ZAT2              ----------->GT1      <-----------GT1<--------P        <---------MYB55(2) ------>MYB46(1)   <----------DOF2   ---------->DOF2            --------->ATHB12    --------->MYB46(3)<---------ALFIN1   aatctctttgaatgcaatgtgaaaaaaggaatagttttttccgacgagaatggttgctgcagcgatttcaaccactgacccaagaaacccacctcgagat  18474000                         ------>NtERF2                         <------NtERF2                       <---------ANAC58                       <---------ANAC46 --------->TOE2(3)     <---------ANAC58             <---------ARR11(3) --ZmHOX2a(2)         <---------LBD16         --------->ANAC58 ----ARR11(3)   ------>MYB46(1)       <-----------RAV1(2)   --------->ANAC46 --->ARR14(2)   ------>MYB83---------->DOF2   --------->ANAC58            ------>ZmHOX2a(1)         -   cgacctcaatctcttaccaacaatggcggacaaagaagacccagaggcaaacaagttccttctcgctacttatctccttctccgtctcactctgtctctt  18474100                --------->ZAT6                --------->AtMYB61 <---------ALFIN1          --------->ZAT6       --------->AtMYB61          --------->AtMYB61    <---------ALFIN1    <---------ALFIN1           --------->DEAR3(1)    --------->ZAT6            --------->MYB46(3)    --------->AtMYB61       <---------ALFIN1   --------->MYB46(3)       --------->AtMYB61 --------->DEAR3(1)         --------->DEAR3(1)             ------>ZmHOX2a(1) --------->AtMYB61         --------->MYB46(3)        <<<<<<<<<TBF1                 --------->ANAC46 <---------ALFIN1        --------->AtMYB61     ------>ZmHOX2a(1)                 <---------DOF5.7(2) -------->MYB46(3)      --------->MYB46(3)  ------>ZmHOX2a(1)            --------->AGP1          ----   ccaccaccactaccactaccactactaccaccaccacctcttcttcctcctcttcttcttcctctgcaatactcagaactagtaaacgatacccatctcc  18474200  Previous    Next  AGI:  At1g49890.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19570.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19570.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61461.1); contains InterPro domain Protein of unknown function DUF566 (InterPro:IPR007573) Range:  from: 18473743    to: 18477491    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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