Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <              --------->YAB1                                                                       --             <------ZmHOX2a(2)       <---------ICU4                                              ----            <---------ARR11(3)       --------->YAB1                                            ------            --------->ARR11(3)       --------->ATHB12                                          <-----   --------->AHL20(2)               <---------YAB1        <---------ANAC58  -------->P    --------->ANAC58 --------->ANAC46                   --------->ICU4        <---------ANAC58--------->ANAC46--------->ANAC58 --------->ANAC58            ---------->DOF2           <---------CCA1(2)--------->ANAC46 --------->DAG2 --------->ANAC58        ----------->GT1      <------ZmHOX2a(2)    <---------AHL20(2)   ---------->DOF2   tacaagaaaatatagatcataacaatctcgttaaaacgatgattaccgatcgaacccatttcttgagaattaatacacaacccgattggaaaaagcaaac  18455300                                             ------>NtERF2     ---------->DOF2                         --------->ABI4(2) ---------AHL20(2)                     --------->MYB52(1)    <---------ALFIN1 ------->AHL20(2)                   --------->YAB1 --------->ANAC58                   --------->WOX13(1) ----->TOE2(3)                    ------>MYB46(1)  --------->ANAC58           <-------TEIL    <------ --->ICU4            <---------YAB1 --------->TOE2(3) --------->WOX13(1) ---------->DOF2      ------- ----ATHB12        --------->YAB1 ------>MYB83<------NtERF2<---------ALFIN1  >>>>>>>>>>>>>>>>>LFY   attaaatcaaagaccatctaattgtaattgtctaccatccataacggtgccactagcaatcccacacttaaacacaaaagtccattgtcaattagtcttt  18455400                                                                        -------->P                                                          --------->ANAC58                                                          ----------->GT1      <-----------GT1                                                          --------->ANAC46 <----------DOF2       <---------ANAC55(2)                                --------->ANAC58<---------DAG2       --------->ANAC55(2)     <---------ALFIN1    <---------YAB1       ------->TEIL       <---------ARR14(2)      <-------TEIL           --------->ANAC58    --------->YAB1      --------->At4g35610   --------->ARR14(2)    <---------ARR14(2)       <---------ALFIN1   --------->ICU4   <---------ARR11(3)   <---------ANAC58    --------->ARR14(2)     <---------ALFIN1 <---------AHL20(2)   --------->ARR11(3)   <---------ANAC58 ----DOF2          <---------ICU4           --------->AHL20(2)  --------->RVE1(1)     <---------ANAC46 ---------------->TaNAC69(2) --------->ANAC58<---------AHL20(2) --------->CCA1(1) <----------DOF2   atttcaaatacgtttctcacatcattcccacacacacttcttagaattaaatgatgaaacacgaaaatatcatctaccttttttcttttcttgtattcgc  18455500                                                                             --------->ANAC58                                                                            ------>MYB46(1)                                                                          --------->AtMYB61                                                                         <---------MYB55(2)                                                                         <---------MYB52(2)                                                                         --------->MYB46(3)                                                                         --------->DEAR3(2)                                                                        ------->TEIL                                                                      ------->GAMYB                                                                     <---------MYB52(2)                                                                     --------->MYB46(3)                                                                   --------->MYB52(1)                                                                 <---------MYB52(2)                                                           <---------DOF5.7(2)                                               ----------->GT1   --------->MYB46(3)                                              --------->DAG2  ------->GAMYB--------->MYB52(1)                                  --------->YAB1           --------->MYB52(1)--------->ANAC58      <-                        --------->YAB1       ---------->DOF2 <---------MYB52(2)            --------->YAB1              --------->TOE2(3)--------->WOX13(1)    XXXXXXXXXXXXXXXXXXXX>MIR418          --------->ICU4    <-----------GT1    <---------YAB1   --------->TOE2(3)--------->DOF5.7(2)------>MYB83  <---------ATHB12   gatttgatactcttcacctaaacttatcaaaaacaatcacaaacttaaaaagttaagacgataacgaactaacgaaccaacgcattttgacaatgatgtt  18455600                                                          ---------->DOF2                    <-------                                            <-----------GT1    <----------ID1                ------>ZmHOX2a(1)                 ----------->GT1       ---------->ID1    <---------------AGL15        --------->AHL20(2)                ------>NtERF2    <---------DAG2          ============================================ --------ALFIN1 --------->LBD16  <----------DOF2 --------->LBD16----------->GT1 <---------At5g28300--   cccacttctaaacttagccgcgttaaatccattcactttttgtttttttcccccaaatactaaagagggcaaaatagtcatttaccgataaaatcctttt  18455700                                                    --------->TOE2(3)                                                   ----------->GT1                                                 --------->ARR14(2)                                        <----------DOF2                        --------->ZAT14 --------------------->WRI1                  ------>NtERF2               <---------LBD16          ------>ZmHOX2a(1)                        ----------->RAV1(2)  --------->ZAT14  <---------GLK1(2)   --------------->AGL15                     --------->At4g35610  <---------ZAT14  <---------ARR14(2) =============================================================== ---DOF2    <----------DOF2           *TSS  ---------->DOF2                      <---------At4g35610 ======================================================MADS_MADS                --------->ANAC46 ---->ZmHOX2a(1)   --------->ARR14(2) ----------------->AGL3                   <---------LBD16  -----   cctctgtagtctcgctctctggattcttcactcactcgggtcctttaaaagtatcgtcaaaacgctctctctctcttcttctccgctgcgacttcttcct  18455800                     --------------->AGL15                    <-----------------AGL2                   ---------->ID1                                   >>>>>>>>>TBF1            ------>NtERF2  <---------TOE1(3)                    <------ZmHOX2a(1)           --------->DEAR3(1)                               <---------ANAC46         <---------ATERF1(1)                                <---------TOE1(1)         ------>NtERF2------>ZmHOX2a(1)                     <---------TOE2(1)         --------->LBD16--------------------->WRI1       --------->ARR14(2)     ----------->GT1        <---------DEAR3(1) <---------TOE2(3)             <---------MYB52(1)    --------->DAG2       <---------LBD16<----------DOF2                    <---------ARR14(2)--------->ANAC58 ====================================MADS_MADS          <-------GAMYB      --------->ANAC58 ->ZmHOX2a(1) --------->GLK1(2)                       <---------ANAC46  <----------ID1   ctctcgttctccggcgactctgtccttttagggtttttcgaactcttcaatttgtttcggttacgaggaagaagaagacgaaaggttacatttttaagag  18455900                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                              -------                                                                                             --------                                                                     ------>ZmHOX2a(1)------->MYC2                                                              <---------CCA1(2)       <-------MYC2              ----------->GT1                               <---------ANAC58          ------->MYC3  -            ---------->DOF2 <-----------GT1                 <---------ANAC58          <-------MYC3  -   tccataaaaaatggaaaagaaacaaggttttttctcatcactcagagacgaagtcgtaagaggcttatctccttctcgttcaagaccacgttctcgttcc  18456000                                                                                        --------->ATERF1(1)                                                                                      --------->ALFIN1                                                                                      <---------DEAR3(1)                                                                                      <---------ANAC46                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                                                     <---------LBD16                                                                                     --------->ATERF1(1)                                                                                    <---------ORA47(2)                                                                                    <---------RAP2.3(1)                                                                                    <---------DEAR4(2)                                                                                    ------>NtERF2                                                                                    <---------ERF1                                                                                    <---------ATERF1(1)                                                                                    <---------RAP2.6(1)                                                                                    <---------RRTF1(1)                                                                                   --------->ALFIN1                                                                                   <---------ANAC46                                                                                   <---------RRTF1(2)                                                                                   <---------RAP2.3(2)                                                                                   <---------RAP2.6(2)                                                                                   --------->ATERF1(2)                                                                                   <---------ATERF1(2)                                                                                   --------->DEAR3(1)                                                                                   <---------DEAR3(1)                                                                                   <---------RAP2.3(3)                                                                                   <---------RRTF1(3)                                                                                  --------->ATERF1(1)                                                                                  <------NtERF2                                                                                 <---------DEAR4(2)                                                                                --------->DEAR3(1)                                                                                <---------RAP2.3(2)                                                                                <---------DEAR3(1)                                                                               --------->At4g35610                                                                               <---------At4g35610                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                            <---------ZAT14                                                                            <---------ZAT2                                                                            <------NtERF2 ----->LBD16                                                             ----------->RAV1(2) -----HSFB2a(2)         <---------ALFIN1                                 <---------At4g35610 ---->HSFB2a(2)       <---------ALFIN1                                   --------->At4g35610 ---->ANAC58          ----------->RAV1(1)                               ------>NtERF2<------NtERF2 -----ANAC55(2)     ------->GAMYB                                       <---------ATERF1(1)<------ZmHOX2a(1) ---->ANAC58       --------->ANAC46        --------->LBD16              --------->LBD16 <------NtERF2 ----LBD16        -------->P               <---------LBD16            <---------LBD16<---------ABI4(1) -->SPL7         ------->GAMYB---------->DOF2     ---------->DOF2  <---------ZAT2<---------RAP2.3(1) ->ARR14(2)     <---------MYB55(2)<---------ARR11(3)               --------->ZAT2<---------ATERF1(1) -------->ANAC58--------->MYB46(3)--------->ARR11(3)              --------->ANAC58--------->RAP2.3(1) -------->ANAC58<---------MYB111(2)      <---------LBD16          --------->ANAC58<---------ABI4(1)   gcaagcccgtctcgttcaacaaccccacacatgaaagctcttctctggggaagaaagaaactaatcgcaagctccggctgcagcggcggcggaggagtaa  18456100                                                                                         ------>ZmHOX2a(2)                                                                                     ------>ZmHOX2a(1)                                 --------->TOE1(3)                   --------------->AGL15                           --------->ETT(1)          --------->CCA1(2)           --------->ARR11(3)                          ---------->ID1             <------ZmHOX2a(2)          --------->HSFB2a(1)                         <-----------HVH21          --------->ARR14(2)          <---------HSFB2a(1)                      <---------ANAC58              --------->ARR11(3)          <------MYB83                      <---------ANAC58 <---------ANAC46             ----------------->AGL1                      <---------ANAC55(2)           --------->AGP1  ----------------->AGL2                      <---------ANAC55(1)           <---------ARR14(2)          <---------HSFC1(2)              ----------->GT1   ----------->RAV1(2) <---------ARR11(3)          <------MYB46(1)<-----            <------ZmHOX2a(1)  -------->P  --------->ATHB12         <-----------------AGL1     ------      ---------->DOF2 --------->ANAC55(2)<---------MYB52(1)         <-----------------AGL2 --------->LBD16   <------ZmHOX2a(1)<-----------GT1    ----------->GT1   <---------MYB52(1)     --------->HSFC1(2) --   tcggaggagaaagaggaggttattacttgtcgcaacctgagccgtttattggaagatccagtagtttaagaccagtaatggaaggtcctgatccagataa  18456200  Previous    Next  AGI:  At1g49840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68554.1); contains InterPro domain Protein of unknown function DUF620 (InterPro:IPR006873) Range:  from: 18455738    to: 18458026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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