Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AtLEC2                   <---------LBD16       <---------ANAC46                 -------->P                                            -------   <-----------HVH21                    --------->MYB52(1)       --------->YAB1              --------  ----------->GT1              --------->LBD16       <---------DOF5.7(2)          ----------->GT1 ---MYB46(3)                 <---------LBD16         --------->MYB52(1)  --------->MYB52(1)  <------- ---->GT1                    <---------ANAC46      --------->ARR11(3)  <---------MYB59---------->DOF2 -->MYB52(2)                <---------LBD16 --------->LBD16      <---------ICU4   --------->YAB1   taaactgttacatggagtctctgttcgagcctcggggaaaactacccggtgaagataacgaaaacaaacatgacctaagcgaaatcgtaaaagaagatgt  18358100                                                        --------->ZAT14                                                        <---------ZAT14                                                <---------WRKY45                                                <---------WRKY38(1)                                                <---------WRKY12        --------->ZAT6                         <<<<<<<<<<WRKY62    <----------DOF2     <------MYB83           --------->WRKY18(1)   --------->TOE1(3)    <------MYB46(1)        <<<<<<<<<<WRKY18             <---------ANAC58   --------->TOE2(3)  <---------WOX13(1)       <<<<<<<<<<WRKY40      ---------->DOF2 ---->GT1     <---------ARR11(3)             <------MYB83     --------->MYB46(3) ->ARR11(3)   --------->ARR11(3)             <------MYB46(1)----------->RAV1(1) --ARR11(3)  <---------CCA1(2)          --------->ICU4--------------->AtSPL8<---------ANAC58      ---   caaaacctttactctaaatcttggattggtattggaaatgtaatagttggtcaaagactgtacaacaaatgaaaagtttcttacaagagcaattctaaaa  18358200                              <---------RVE1(1)                             <---------ARR14(2)                             --------->ARR14(2)                                     --------->CCA1(2)                        ----------->RAV1(1)                                    ---------->DOF2             --------->AHL20(2)                                        --------->HSFC1(2)             --------->YAB1  <---------GLK1(2)                         <---------HSFB2a(1)          --------->YAB1------->GAMYB                              ----------->GT1 <---------ARR11(3)       ----------->GT1 --------->MYB46(3)                        ---------->DOF2   --------->ARR11(1)  <---------GLK1(2)  <-----------GT1                   --------->ANAC58--------->HSFB2a(1) ------->DOF2<---------AHL20(2)  <----------DOF2       --------->ANAC58<---------HSFC1(2)      ------   aaaagattgttgtaataatatagtaaccacagatactttgatactctatgtgaagtcaagaaaatgaaaaagaaaattccaaaaagatttgatttttgtc  18358300                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   <---------DEAR3(2)                                                                           <------ZmHOX2a(2)               --------->ICU4                                              --------->CCA1(2)               <---------YAB1                         <---------At5g28300 <---------ARR14(2)             --------->ATHB12                        <-----------GT1      <---------ARR11(3)             --------->YAB1                     <---------MYB52(1)        <---------AGP1             <--------ATHB1                    <---------MYB52(1)         --------->AGP1<-----------GT1             <---------ICU4                 <---------LBD16               --------->ARR11(3)            <---------YAB1     --------->ARR11(3) --------->MYB52(2)      --------->ARR14(2)            <---------ATHB12   <---------ARR11(3) <---------MYB46(3)     <---------GLK1(1)  --------- <----------DOF2  <---------TOE2(3)       <-----------GT1      <---------AHL20(2) <---------DEAR3(1) ---->ID1   --------->ICU4--------->At4g35610 --------->LBD16<----------DOF2------>ZmHOX2a(2)      --   tctctttcttcccaatgattatggaatcagcgaaatcttggttatttccggtttgttactgtgctttaatttgtgagatctgagtcggtgtaaccagtga  18358400                    --------->AHL20(1)                *TSS                    <---------AHL20(1)               <-----------GT1                    --------->AHL20(2)            <---------GLK1(2)          <---------ZAT6                     ------>MYB46(1)                   <---------ANAC58    <---------ARR14(2)                       ------>MYB83            <---------AHL20(2)    --------->ARR14(2)  --------->YAB1       --------->MYB52(1)     --------->AHL20(2)             -- -->GT1>>>>>>>ZML2  <---------AHL20(2)     <---------MYB59      <---------ALFIN1      ------>ZmHOX2a(1) ------->MYB52(1)  --------->AHL20(2)      --------->AtMYB61   --------->LBD16 <---------ANAC58    <-   aaaccggttctagtgatggaaataaattagaatttagaaaacaaaccaaaccgattttcttctcccccaattttatattttgcttctcctctcgagtttg  18358500                                                                                                    -            <------ZmHOX2a(1)                                    --------->ARR11(3)                 <          <---------TOE2(3)                      <---------ARR11(3)                     --------->ARR11(3)          <---------TOE1(3)                      <---------GLK1(2)               ---------->DOF2   <- ------->ARR14(2) <---------TOE1(3)              --------->ARR11(3)        <---------YAB1 ------>ZmHOX2a(2) --------ARR14(2) <---------TOE2(3)   <----------DOF2<-----------GT1   <---------GLK1(2)<---------ARR11(3)   ggattcgagtttaaggaattagggtttctaatctctctctctttctctcgagatttttcttcacttagttcttgattctgattaaaagttgatcttatag  18358600     <---------HSFC1(2)                                                         <---------ARR14(2)  <---------MYB52(1)                                                        --------->YAB1  --------->At5g28300                                                ----------->GT1 --------->LBD16                                                    <---------TOE2(3) -------->HSFB2a(2)        <-----------GT1            <---------ALFIN1   --------->WOX13(1) ---------HSFB2a(2)   <---------AHL20(2)   <---------At4g35610----------->HVH21 --------->ARR14(2)  < --------LBD16 <---------LBD16        --------->YAB1 ------>ZmHOX2a(2)  >>>>>>>>>GT-1    <----------DOF2   ttccggtaacttcgttttctgggtttaattttcgattcaatcttcatctccttgatccacagccatgactgaggtaaatcaaaattcgcatcttttctct  18358700                           <---------ANAC46                           <---------ANAC58                                               <---------WRKY12               --------->ANAC58                                                           <<<<<<<<<WRKY18               --------->ANAC55(2)--------->ANAC55(2)                                    --------->WRKY18(1)               <---------ANAC55(2)<---------ANAC58                          --------------->AGL15               --------->ANAC58   <---------ANAC58                          <---------------AGL15               --------->ANAC46   <---------ANAC55(2)                      <-----------------AGL1             <-----------GT1      <---------ANAC46------>ZmHOX2a(2)        ----------------->AGL1      <----------DOF2      <---------ANAC58     <---------ARR11(3)         <-----------------AG   --- ---------CCA1(2) --------->ARR14(2)            --------->ARR11(3) <---------ZAT6    <--------P<-----   ccaaatctctttgaattacgaaacctctgtcttgtttcgtaattgaaattgatcttgagtttgttttttgtgttatttcagtattgggtaagtcaaggga  18358800                                  <---------KAN4(1)                            <-------TEIL                           --------->CCA1(2)                          <---------ARR14(2)                    <---------ARR14(2)                    --------->ARR14(2)                                               --------->ALFIN1                    --------->ARR11(1)                                   ----------->HVH21     ----------->GT1<---------ARR11(3)                                  <-----------TGA1     <---------ANAC46--------->CCA1(2)                                  <-----------HVH21        ---- ------>MYB46(3)    --------->ARR11(3)                                 --------->ANAC46          <--- -----ID1     <---------HSFB2a(2) --------->KAN4(1)       ----------->HVH21       --------->GLK1(2)--   acaaatggtgtgaattctgtaagatatggatacagaacaatccaacaagtattagaaaccatgaccttggtaagcgtcaccgagaatgtgttgataagaa  18358900                      --------->ZAT18                      <---------ZAT18                      <---------ZAT14           <-----------HVH21          <---------ANAC58                                                              <---------ICU4          <---------ANAC58                                                             --------->ICU4          <---------ANAC46                                                  <---------ZAT2      --------->CCA1(2)           ---------->DOF2                           --------->At4g35610      --------->GLK1(1)     ---------->DOF2        <----------ID1           --------->ZAT2<---------YAB1      <---------GLK1(1)  ------>NtERF2             ----------->GT1          <---------At4g35610     < ----->At4g35610      --------->ZAT14       --------->ANAC58           <------ZmHOX2a(2)--------->YAB1 ------At4g35610     --------->ALFIN1       --------->ANAC58     ----------->RAV1(1)   <---------YAB1 ------->ZAT18    <------ZmHOX2a(1)    --------->At4g35610      --------->REM1(1)      <---------ATHB12   gctcactgatatgcgtgagaggagtgcagccaaagacaaagagctcaagaaaaacgaaaaactgcttcaacagatcgaagctgtgagtaatcattcttgt  18359000  Previous    Next  AGI:  At1g49580.1    Description:  calcium-dependent protein kinase, putative / CDPK, putative. similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G19100.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G56760.1); similar to CRK (CDPK-RELATED KINASE), calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase [Arabidopsis thaliana] (TAIR:AT3G50530.1); similar to CDPK-related protein kinase [Gossypium hirsutum] (GB:AAZ83348.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47769.1); similar to hypothetical protein [Vitis vinifera] Range:  from: 18355126    to: 18358287    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g49590.1    Description:  formin-binding protein-related. similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96440.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690) Range:  from: 18358454    to: 18360310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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