Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------bZIP60(1)                                                          <---------ZAT14             <---------ZAT2                          --------->ZAT14   <---------O2         --------->AtMYB61                           <---------ZAT18   ----------->GT1     ----------->HVH21                               --------->ZAT18   --------->bZIP60(1)    <---------MYB59                                  <---------ZAT14   <---------bZIP60(2)   --------->At4g35610                         --------->TOE2(3)---------->DOF2   <---------At4g35610              --------->YAB1---------->DOF2--------->DAG2 <---------ARR11(3)  ------->TEIL           <----------DOF2 <----------DOF2  --------->ZAT14----------->HVH21<----------DOF2   actggacctgaccacagctagtttgaacttttgactaatcagactttaaacttaatgcactgtagaaaaagtgatgtgacaatatgtttcaactttgcta  18335700                                                                                                   <-                                                                                               ------                                                                   <---------YAB1             <------                                                                 --------->YAB1               -------                                                                --------->ICU4          --------->ALFIN1                                        -------->P              <---------ATHB12     --------->DAG2<-   acaaaatttgcctaaatagttgctaaaacgtttcaacttatctaccaaaatttcagaaatagcacaatgatgctaatagagaaacagaaggtggtcatga  18335800                                     <---------ICU4  ----------->GT1                    <--------ATHB1  <---------MYB46(3)                 --------->ATHB12                                               < -----MYB46(1)                       --------->ATHB51                                         ------>ZmHOX2a(1) --->ATHB12                         <---------ATHB51                                       ------>MYB46(1) ---YAB1                   <---------At4g35610                        <----------DOF2      ------>MYB83 -->ICU4               --------->ANAC46                             <---------YAB1    <---------DOF5.7(2) -----MYB83          <-----------GT1<---------AHL20(2)           <---------MYB52(1)   <-----------GT1   taggtggttttttatgtgttttttcactcagcacttgaataattgaattcaaaaacactctgactcagttatctttacaacaagaagttaaccttcctct  18335900                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                             --------                                                                                            <--------                                                                                            <--------                                         --------->ANAC58                                   <--------                                --------->ARR11(3)                                          ---------                                <---------ARR11(3)                                          ---------                              --------->ICU4                                                <--------                              <---------YAB1                                          <---------ARR14(2)       <<<<<<<<<ARR2     <------MYB83---------->DOF2           --------->ANAC46       ------->TEIL       <<<<<<<<<ARR1     <------MYB46(1) --------->ANAC46      --------->ANAC58       --------->ARR14(2)  <-----------GT1       --------->MYB59  --------->ANAC58      --------->ANAC58      <---------CCA1(2) ----------DOF2     <---------ZAT6------>ZmHOX2a(2)   <---------AtMYB61--------->TOE2(3)    <--------   gtctttacaatcttacacagtagagtttggtcatgatcttaaaacgcctcaatgtattggtgtttacgcaaaacatcaacaaaatttgtatcttccgtaa  18336000 --------->At4g35610 ------ARR14(2) ----->ARR14(2) ----->ARR11(3) ------ARR11(3) -----CCA1(2) ---MYB52(1) ->LBD16                                                                           <----------DOF2 -ANAC58                                                                     <---------ARR14(2) -ANAC46                   <---------AHL20(2)                             --------->YAB1 -HSFB2a(2)               --------->AHL20(2)                            --------->ANAC58 <---------AHL20(2) >ANAC55(2)             --------->TOE2(3)  <-----------------AGL1       --------->ANAC58<---------AHL20(2) >HSFB2a(2)     <---------CCA1(2)  <---------ANAC58    <-----------------AGL3--------->ARR14(2) -ANAC58 <-------TEIL <---------AHL20(2) <------ZmHOX2a(1)     ----------->GT1 <-----------GT1   *TSS -ANAC55(2) --------->AtLEC2       <---------ANAC58    ==============================================   atcttctgagattcatgcatatatttcattaaatctgtcttgaggaccaagtatggaacttaaaatggtttaacaagcatatttcctttttttattttgt  18336100                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                            <--------                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                   --------->YAB1<---                       --------->TOE2(3)            --------->ANAC46           --------->At5g28300---                    <-----------GT1 --------------->AGL15                     ----------->GT1    <---                  <----------DOF2   <---------------AGL15              <---------ANAC58  --------->YAB1         <---------ATHB12  <---------YAB1     --------->CCA1(2)        <---------ANAC58 --------->ICU4 ===================================================MADS_MADS  ---------->DOF2<----------DOF2   <----   attagaggctaatgaagaaactttacattattttggtgctactattagatataaacacaactcaataaagtttacttgcgctgtaacataatcatcatgc  18336200                                                      ------>NtERF2                                                     <---------ANAC46                                                     --------->RAP2.3(2)   <----------DOF2                                   --------->DEAR3(1)  --------->bZIP60(2)                                --------->RAP2.3(3) ------>NtERF2                                      --------->RAP2.3(1) <------NtERF2                                      --------->DEAR4(2) -------->RAP2.6(2)                               --------->DEAR3(1) --------DEAR3(1)                                --------->MYB46(3) ------->ATERF1(1)                               <---------MYB55(2)          ------>NtERF2 ------>ATERF1(1)                                <------------AtMYB77       --------->DEAR3(1) -------DREB2C(1)                                --------->DEAR3(2)     <---------ZAT2 --->NtERF2   <---------GLK1(2)                 -------->P              --------->ZAT2 -ICU4      <---------YAB1                      ------>MYB46(1)        --------->ANAC58 ------ATERF1(1)               <---------At4g35610------->GAMYB        --------->ANAC58 ------>DREB2C(1)             ----------->GT1--------->SPL7        --------->ANAC58 ------RAP2.3(1)             <---------RAP2.6(2)------>MYB83       --------->ANAC58 -----RAP2.6(2)        <---------ZAT14     --------->ORA47(1)      ------>ZmHOX2a(2)   <-------TEIL   ggccgcgttacagtctgattctgtctgcaatgcggctaatacgaccgtccaaccgccgtctaagttcgatcgcaagctccgactctgagttcatttcata  18336300                                                                       <----------DOF2                                                                     ------>ZmHOX2a(1)                                                              --------------->AtSPL8                 <-------TEIL                          ----------->RAV1(1)        <---------TOE2(3)---------->DOF2          <----------DOF2  ----------------->AGL1        ----    --------->YAB1--------->WOX13(1)            ------>ZmHOX2a(1)---------->ID1              <-------TEIL   catgaagaataaggctaagtccatcaacaaagcactagacaattcaattcctctttgcaacaattttgttcctctttgggagccagtactcgaggttcac  18336400                                                                    --------->ZAT2                                                                  <---------ZAT18                                                                 <---------ANAC58                   -                                                                 <---------ANAC58                   <                                                             <---------ANAC58               ------->GAMYB             --------->ANAC58                                <---------ANAC58               ---------             --------->ANAC46                                <---------ANAC46  <------NtERF2---------           <---------ALFIN1                             <------MYB83<---------ZAT2      <---------WRKY38(1)          <-------TEIL     --------->LBD16              <------MYB46(1)    <------MYB46(1)  ---------      --------------->AtSPL3                           <---------MYB46(3)  <------MYB83 <---------WRKY12      <---------------AtSPL8<------NtERF2              <---------AtMYB61  <---------TOE1(2) ---------  --------->CCA1(2)   <-----------RAV1(2)              --------->MYB59    <---------TOE2(2) --------- ------>DOF2 --------->ANAC58                        <---------MYB52(1)   <---------AtMYB61--------->MYB46(3)   aaagctatgaggtacacgcttctcccaggcggaaaacgagtaaggccaatgctctgtttggtcgcttgcgagctcgtaggtggccaagagtcaaccgcaa  18336500                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                    --------->LBD16--  <------NtERF2                                                                    --------->DEAR3(1)  --------->ZAT2                                                                 ------>NtERF2   <---  --------->At4g35610                                                 --------->ETT(2)           <---  <---------ZAT2                                                      <---------ETT(2)         ------  <---------At4g35610             <-----------HVH21          <---------AtLEC2    --------->LBD16----- ------>NtERF2              --------->ANAC46             <---------ANAC46       --------->ANAC46<---- -------->ATERF1(2)         --------->ANAC58             <---------ANAC58       --------->DEAR3(1) -- ---------ATERF1(2)  <---------YAB1                      --------------->AGL15 --------->ATERF1(1)--- >ANAC46           <---------At4g35610                   <---------ANAC58     <---------ATERF1(1)<--- >TOE2(3)     <-------GAMYB --------->ANAC58           ------>MYB83   --------->TGA2(1)        ------ >RAP2.6(2)  <---------MYB46(3)  --------->DEAR3(1)    ------>MYB46(1)<---------bZIP60(1)     ------- >ANAC58    <---------RAP2.6(2) <------NtERF2<---------HSFB2a(2)      --------->bZIP60(1)    -------- >ANAC58   <---------ZAT18 <---------LBD16   ------>ZmHOX2a(1)     ----------->TGA1<---------ANAC46--   tgccagcagcctgtgcggttgagatgattcacgcagcgtcgctcatcctagacgaccttccttgtatggatgacgacagcctccgccgtggaaaacccac  18336600  Previous    Next  AGI:  At1g49530.1    Description:  GGPS6 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 6); farnesyltranstransferase. Identical to Geranylgeranyl pyrophosphate synthetase 6, mitochondrial precursor (GGPP6) [Arabidopsis Thaliana] (GB:O22043;GB:Q9XIC0); similar to geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative [Arabidopsis thaliana] (TAIR:AT3G20160.1); similar to Geranylgeranyl pyrophosphate synthetase, chloroplast/chromoplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ; Farnesyltranstransferase ] (GB:Q43133); contains InterPro domain Polyprenyl synthetase; (Inte Range:  from: 18336097    to: 18337357    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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