Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <-----------HVH21          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <------MYB83       <------MYB46(1)     <--------P                                                                 ------->TEIL   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ANAC46                       <---------ANAC46   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ANAC46               --------->ATHB12 <---------ANAC58                  <-----------RAV1(1)  ------->MYC3  --------->ICU4 <---------ANAC46             <----------DOF2           <-------MYC3--------->CCA1(2) <---------ANAC58          <---------YAB1              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <   atgacttgtaggtgtcatagagctatgttatgcttttgtgttgtgtttttgttataaacgtggataagagaaatgagtgatgtatgtttttatgctctac  18286300                                                                                             <-------TEIL               ---------->DOF2                                                              ---------            <---------TOE2(3)                      <-----------GT1         --------->YAB1  <---------ARR14(2)      <---------TOE2(3)                     <---------HSFB2a(2)          <---------------------WRI1     --------->YAB1         <----------DOF2 --------->HSFB2a(2)        --------->MYB46(3)  --------->ARR14(2) ---------ATHB12    <---------GLK1(1) <---------TOE1(2)           --------->YAB1    ---------->DOF2   taatgaataatgttaagaaaagaattctctctttcaattctaggttatagaaataacaaaactcaaaatcacaacaactataaatacaaagaagatacaa  18286400                       <---------TOE2(3)                       <---------TOE1(3)                 <---------YAB1                <---------AHL20(1)                <---------AHL20(2)       --------->ARR14(2)                                               <---------TOE2(3)         <--       --------->ARR11(1)                                      ------>NtERF2                      ---       <---------GLK1(2)                     ----------->GT1<---------At5g28300            <---------       <---------ARR14(2)      <---------AHL20(2)  --------------------->WRI1        <---------ALFIN1   ---------->DOF2  <---------YAB1         <---------At5g28300--------->DEAR3(1)    --------->ZAT18<- >CCA1(2)<-------TEIL<---------AHL20(2)   <-----------GT1  <-----------GT1          <---------ZAT14<-   aacaaaaaagattcgtattatttttaatgttatttagtttagttttactgtaatattgtttttaccgcccgtttaatgtttttttgcacactgcttttat  18286500                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)              --------->LBD16                                             --------->AHL20(2)  <---------WOX13(1)                                                     --------->AHL20(2) -------AHL20(2)                                                 ---------->DOF2 --------->AHL20(2) ------>AHL20(2)  <--------P                                    --------->AHL20(2)--------->AHL20(2) -DOF2      <---------LBD16                          ----------->GT1 --------->AHL20(2) --------YAB1<---------ANAC46         --------->ARR11(3)   <---------AHL20(2)--------->AHL20(2)     < --------AHL20(2)<-------GAMYB        <---------ARR11(3)   --------->AHL20(2)<---------AHL20(2)   ---   tttaattgatggtttacggggttgaatataagtttgtgaaggtcttataagcgagggctaaaaaaataaaagaaaataaaaaaataaaaaaataagcgag  18286600                                        --------->TOE2(3)         --------->ICU4               --------->GLK1(2)        ------------>CBF             <---------GLK1(2)    <---------ANAC55(2)           <---------------------WRI1    ----------->GT1            <---------ANAC58    --------->ANAC55(2)        <---------ANAC58        <----------DOF2         --------->ANAC58 ----------DOF2                <---------ANAC46       <---------ICU4           --------->ANAC58     *TSS ------>ZAT18              <----------DOF2   ---------->DOF2                 <<<<<<<ZML2 <-----------GT1   cgcgttaagtaacaattagttaagttgggctttgtgtgagattcttaaaaagcccatctttacaaaacatgaaaccctagaacgaaacatttcactcttc  18286700                              <---------ARR14(2)                              <---------ARR14(3)                              --------->ARR14(3)                              <---------GLK1(2)                              <---------ARR11(3)                              --------->ARR11(3)                       --------->LBD16                       ------>NtERF2                      --------->ANAC46                      <---------DEAR3(1)                      --------->LBD16                     --------->LBD16                              <------NtERF2                     <---------LBD16                       ----------->RAV1(2)                 <---------GLK1(1)                    ==============HOX2a_HOX2a                 --------->GLK1(1)                    ------>ZmHOX2a(2)                --------->ARR14(2)                  <---------ARR11(3)                <---------ARR14(2)                  --------->ARR11(3)  <<<<<<<<<SARD1                <---------GLK1(2)                <---------MYB52(1)     <<<<<<<<<CBP60g   -----------               --------->At4g35610              --------->LBD16   ------>NtERF2      <----------DOF2               <---------At4g35610          --------->ARR14(2)  --------->SPL7    <---------ARR11(3)        --------->AtMYB61   ----------->ARR10 <---------LBD16------>ZmHOX2a(1)    --------->ARR11(3)        <---------ALFIN1<------NtERF2       <---------ARR14(2)<-----------HVH21  <---------CCA1(2)   ttctcttccaccatctcagattccccggcgaagattttgttcacagtttccggtgatcttctcctgtccgcccaaatttcagtatatctttgaagtaaaa  18286800                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                              <------NtERF2                                                                              --------->RAP2.3(1)                                                                              --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                           --------->ATERF1(1)                                                                         <---------MYB46(3)                                                                        <---------AtMYB61                                                                    <---------ZAT14                                                                    --------->ZAT14              ----               --------->AHL20(2)                               --------->ARR11(3)<---------ETT(2)         --------->At4g35610   --------->ATHB12                 --------->GLK1(2)<------NtERF2 ------    --------->WOX13(1)        ----------->HVH21                 <---------ARR11(3)--------->ETT(2)--- >GT1  --------->YAB1         <---------ZAT6              <-------TEIL  <---------ZAT6         <-----   ctttgttaatcagcaaaaaaaatatgaagccagtgataggcacagtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttcca  18286900                   --------->TOE2(3)                          ----------->RAV1(2)                   <-----------HVH21                          =================RAV    --------->ARR11(3)                                       ------>NtERF2    <---------ARR11(3)                                       <---------ATERF1(1)    --------->GLK1(2)       ------->TEIL                    --------->ANAC58 ----->ANAC46     --------->ANAC58                          --------->ANAC58     ----------->GT1 --->HSFB2a(2)    --------->REM1(1)                    ---------->DOF2        <------ZmHOX2a(2) -------->RAV1(1) --------->ANAC58                  ------>NtERF2       <---------DEAR3(1)       ---- ----HSFB2a(2)    --------->bZIP60(2) <-------TEIL <----------ID1  ----------->RAV1(1)           <---   caacaaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacgacaaagacgcctgcaacatcggcgatcgagtaaattctctcgca  18287000                                      <----------DOF2                                    <---------MYB52(1)                                  <---------ANAC58                              ----------->RAV1(2)                        <---------ANAC58                                     ------->TEIL                        <---------ANAC46         --------->ANAC46        <---------WOX13(1)          <----------DOF2         <---------ANAC46    --------->O2     --------->ATHB12 ----->GLK1(1)          <---------ANAC58 --------->AHL20(2)       <----------DOF2 ------GLK1(1) --------->ZAT6     <---------ANAC58  <---------ALFIN1  <---------YAB1   tttccttcttccctttcactctaatttcgtttgattccgtcttttaaatctgagccacttgaattaggctttgtgattgaacctctgaggctaagaaatt  18287100                  <------MYB83              --------->ALFIN1            <---------ANAC46        <---------WOX13(1)                                                    --------->YAB1     <---        <--------P<------MYB46(1)                                            --------->ICU4     <----  --------->GLK1(2)             --------->WOX13(1)                           <---------ATHB12   -----  --------->ARR14(2)           <-------TEIL                       <-----------RAV1(1) --------->DAG2  <---------ARR14(2)          <------ZmHOX2a(2)      <---------KAN4(2) <---------HSFB2a(2)      <----  <---------ARR11(3)         --------->AGP1         --------->YAB1<---------MYB46(3) ---------->DOF2  --------->ARR11(3)       --------->MYB59<----------DOF2 --------->ATHB12 --------->GLK1(1)    -----   tgaaaatctggttgatgtgtaggtgaagttagatccatcaaggcctttgagcaagaataagcattggattgttgcagaaatcatcaaaaaagctcgaatt  18287200  Previous    Next  AGI:  At1g49400.1    Description:  EMB1129 (EMBRYO DEFECTIVE 1129); structural constituent of ribosome. similar to ribosomal protein S17 family protein [Arabidopsis thaliana] (TAIR:AT3G18880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45477.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45488.1); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); contains InterPro domain Ribosomal protein S17; (InterPro:IPR000266) Range:  from: 18286700    to: 18287870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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