Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ARR14(2)                                                                                        <---------GLK1(2)                                                                                      --------->LBD16                                                                                     --------->LBD16                                                                                    --------->HSFB2a(2)                                                                                    <---------HSFB2a(2)                                        <---------DAG2                              <---------LBD16                                        <----------DOF2                          <----------DOF2 <---                              <---------MYB46(3)            <----------DOF2    <---------At4g35610                           <---------ANAC46          --------->KAN4(2)   <---------ICU4 --------->ARR14(2)    <-----------GT1       --------->ATHB12     <--------P   <---------DAG2     --------->At4g35610   ttctattaacatgtagaggtatttgtattcagtggatgaacactttctggttgctcattccgcttttctggttactcattccgcttcccggatactctcg  18268200                                    --------->MYB52(1)                                 --------------->AGL15                                 <---------------AGL15                                <-----------------AGL1                                ----------------->AGL1                               ------>NtERF2                            <---------At4g35610                            <---------ZAT2                            --------->ZAT2                          <---------CCA1(2)   <----------DOF2          --------->At4g35610            <---------ZAT2             <---------HSFB2a(2)  <---------ANAC58  --------->GLK1(1)                      <---------At4g35610        --------->HSFB2a(2)  <---------ANAC58  <---------GLK1(1)         --------->YAB1        <---------At4g35610     --------- ------MYB52(1)   <------ZmHOX2a(1)----------->HVH21     <---------ZAT18       --------->GLK1(2)   tttggcttttctgaaatagaggaattctgaagctgccctaacaggtattcatcagtttgtgagcttgttcatctctctgagattccttctcgaggtatcc  18268300                                    --------->ANAC58                       <---------MYB52(1)       --------->TOE1(2)                       <XXXXXXXXXXXXXXXXXXXXMIR841                       <XXXXXXXXXXXXXXXXXXXXMIR841B                    <-------TEIL    --------->ANAC58                --------->AHL20(2)<---------ANAC58             --------->YAB1       <---------ANAC46               --------->ARR14(2)            <---------YAB1        <---------ANAC58--------->ANAC58            --------->ICU4      <---------MYB46(3)--------->ANAC58      <------ZmHOX2a(2) >GLK1(1)   <---------ATHB12--------->ATHB12   --------->MYB46(3)<---------ARR14(2)  <---------At4g35610   atctaacttggacaatgataaattcgttattcagtggctcgtaaactgaaccaaggaaacgagttagtattcggatcatggaacttatgctgtccatcgc  18268400                                                                                                  <--                                                                                                  ---                                                  <---------LBD16                                <---          --------->WOX13(1)    ----------->RAV1(2)        <---------ZAT14                     ------        <---------YAB1   <---------GLK1(2)       <---------LBD16<---------ZAT18          <---------HSFB2a(2) <---------YAB1 --------->MYB46(3)------>ZmHOX2a(1)        --------->ZAT14               --------->HSFB2a(2)   aatattgttgatcattcaacaactttggaatctctcctgaatggcaattgactcgggagtctgtagtgcatacttaaattcaaattgatttttagaacaa  18268500                     <---------AHL20(2)       <---------AHL20(2) <---------AHL20(2)                                                ---------       --------->AHL20(2)--------->AHL20(2)            --------->ZAT14                     ---------- --------->YAB1     <---------AHL20(1)                 --------->REM1(2)               <---------YAB1 <-----------GT1    --------->AHL20(2)         <---------------AGL15             --------->ICU4 -------ICU4        <---------AHL20(2)        <---------YAB1                     <---------ATHB12 ------>YAB1        --------->AHL20(1)       -------->P<---------ZAT14         <---------ICU4 <------ ------ATHB51  --------->AHL20(2)           <-----------GT1                  <---------MYB52(2)  ---- --->YAB1    <---------TOE2(3)    ----------->GT1   <---------ANAC46      <---------WRKY12 ----------   taataacaattttttaagaaaataaaatttaaaatttcgaaaaaacttaccattcagtgtagaaaatgtctgtaagtcaactaatgactatgagtgacgg  18268600                                                                           <---------ZAT14                                                                    --------->WOX13(1)                                                                   ================================HOX2a_HOX2a                                                                   ------>ZmHOX2a(2)                                                                 --------->AGP1                                                                 <---------AGP1                                                                 --------->ARR14(2)                                                                 <---------ARR11(3)                                                                 <---------ARR14(2)  ---------->DOF2                                                --------->ARR11(3)          -------- >MYB52(1)                             *TSS                 --------->MYB52(1)               <------- ->TGA1                          <---------ZAT14  --------->ANAC58=================================HOX2a_HOX2a ---ANAC46                       --------->ZAT14  --------->ANAC58<------ZmHOX2a(2) --------->ZAT14 ------->GT1                 <---------------AtSPL8----------->RAV1(1)     --------->ZAT14  <------ZmHOX2a(1) ->HVH21            ---------->DOF2    ------------>CBF   --------->MYB46(3)        <---------ZAT14   agttaaaagaaaaaaaaaaaaaaaaagagatagagtacagagacaatatagaacgacagaacaaacagatctatcagtttactgactacagagaggattt  18268700                                                       --------->ABI4(2)                                                       <---------ZAT18                                                       --------->ZAT18                    <---------ALFIN1                                                       --------->ZAT14                    --------->AtMYB61                                                       <---------ZAT14     --------->ANAC46                                               <---------YAB1              --------->ANAC58      --------->GLK1(2)               <---------ARR14(2)                   --------->ANAC58 --------- ->ARR14(2)                           --------->ARR14(2) --------->At4g35610    --------->ANAC58 ---- --ARR14(2)                 <-------TEIL  ----------->GT1<---------At4g35610    --------->ANAC58 ----   gaactgagaatcgaagaaagtctctgagggttcatctatggaaccggttataatcggtgcgctgattttggatgttcacgccaagccttcgaccacacca  18268800       --------->MYB46(3)     <---------ARR14(2)     --------->ARR14(2)                                                      <---------ANAC58   -----    <------ZmHOX2a(1)                                                        <---------ANAC58  ------  <---------TOE1(2)                                                     --------->ATHB12       ------ <---------LBD16                                                      <---------WOX13(1)       ------ >ANAC46<---------ALFIN1                                           <---------YAB1            -------- -->MYB46(1)         <-----------RAV1(2)                        <----------DOF2           --------->ANAC46 -->MYB83   <-----------HVH21                        <----------DOF2--------->ATHB12 --------->MYB46(3)   atctcaggaaccactgtccctggccaggttttaaacttgggttctatctccctctcttttgtctgacttttgattgatttcttgtcaacaatccgaaacg  18268900                                                                             ---------->DOF2                                                                     --------->PCF2                                                                   <-----------GT1                     ------>ZmHOX2a(2)                         <----------DOF2                     =========================HOX2a_HOX2a     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                        <------ZmHOX2a(2)              <--------                    ==========================HOX2a_HOX2a   --------->ARR11(3)              <--------                   <---------ARR14(2)                       <---------ARR11(3)           --------->ICU4                <---------ANAC55(2)                        ------->GAMYB   <---------MYB55(2)       <                <---------ANAC46                         <---------TOE2(3)--------->ANAC58  ---------      --------->AHL20(2)                                 <---------TOE1(3)--------->ANAC58  <-------- --------->AHL20(2)--------->ARR14(2)    ---------->DOF2<-----------GT1 <---------ALFIN1 <---------ATHB51 ------>GT1     --------->ANAC55(2)    =============================HOX2a_HOX2a          <---------ATHB12 ----->GT1     <---------LBD16         ------>ZmHOX2a(1)--------->MYB52(1)--------->ANAC46--------->YAB1 --->ANAC58   <-----------GT1          ==============================HOX2a_HOX2a --------->ALFIN1   - --->ANAC58<---------ICU4             --------->TOE2(3) <---------DOF5.7(2)--------->MYB46(3)      <- ->MYB52(1)--------->YAB1  <----------DOF2            --------->DOF5.7(2)------>NtERF2 --------->WOX13(1)   gaaaaaaattcaatagttacggatcgtcactttgatttttcctaaaagctggagtagttaacgatcttttagccccacccaaagtgtggcaattatgtgt  18269000                                                                          <---------REM1(1)                                                                          <---------ANAC46                                                                          --------->ALFIN1                                                                        <------MYB46(1)                                                                       <---------AtMYB61                                                                       <---------DEAR3(1)                                                                       --------->ALFIN1                                                                      <---------ABI4(1)                                                                    ------>NtERF2                                                                    <---------MYB46(3)                                                                    --------->MYB55(2)                                                                    --------->LBD16       <------ZmHOX2a(1)                                           <---------ANAC46     --------->MYB59                                               --------->DEAR3(1)    <---------ICU4                                                 <-----------RAV1(2) <---------AHL20(2)                                               <---------LBD16              <----- -ANAC46                                              <---------ARR11(3)<---------ANAC46     -------- -ANAC55(1)                                   --------->TOE2(3)   <------NtERF2  --------->ANAC58 ---------AHL20(2)                            <----------DOF2     --------->ATERF1(1)     <---------At4g35610 >ANAC55(2)                        ----------->GT1    --------->ARR11(3)<------MYB83      --------->At4g35610 -ANAC55(2)                   --------->YAB1<---------YAB1       ------>NtERF2   --------->ANAC58  -- -------->AHL20(2)      <---------ANAC55(2)--------->ARR11(3)    <---------RRTF1(1)      ------->TEIL --------YAB1           --------->ANAC55(2)<---------ARR11(3)    <---------RAP2.3(1)  <---------REM1(1)   tattaattaggacatagatgtttattaagtaatcaacatgtaaattatctttaataggtcttatttgcgccgggtggtgtagcaagaaatgtagctgatt  18269100  Previous    Next  AGI:  At1g49340.1    Description:  ATPI4K ALPHA (Arabidopsis thaliana phosphatidylinositol 4-kinase alpha); inositol or phosphatidylinositol kinase. similar to phosphatidylinositol 4-kinase, putative [Arabidopsis thaliana] (TAIR:AT1G51040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47656.1); similar to hypothetical protein OsI_012841 [Oryza sativa (indica cultivar-group)] (GB:EAY91608.1); similar to hypothetical protein OsJ_011820 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28337.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Phosphatidyli Range:  from: 18256023    to: 18268130    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g49350.1    Description:  pfkB-type carbohydrate kinase family protein. similar to Carbohydrate kinase, PfkB [Medicago truncatula] (GB:ABC75360.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 18268639    to: 18270938    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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