Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->AHL20(2)                                                         --------->ANAC58                                                         --------->ANAC58                                                     <-----------HVH21                              <                                                <---------ZAT14<---------AHL20(2)                   -      <---------YAB1                     --------->ICU4 --------->WOX13(1)                      -----    <---------CCA1(2)              --------->YAB1   <---------ZAT6                              <---- ------>DOF2  ----------->GT1  <---------AHL20(2) <---------At5g28300                          <-----   aaagtcttatctttggaagtaaatccctataagttaattagaaatgtttgtttactgtcaagcatttaatataaaactctaaaattggttcacattttct  18194600                            --------->AHL20(1)                            --------->AHL20(2)                            <---------AHL20(1)                            <---------AHL20(2)                        <---------YAB1    <----------DOF2   --------->YAB1                                   ---------->DOF2 ---------GLK1(1)     <-----------GT1                         <---------------AGL15 -------->GLK1(1)  <---------ICU4                            <-----------------AGL3 ---->HSFB2a(2)   --------->AHL20(2)      --------->GLK1(1)<---------YAB1  ----------->GT1        <-- -----HSFB2a(2)   <---------AHL20(2) ---------->DOF2      <---------ARR11(3)                  <------ ----LBD16        <---------YAB1  <---------TOE2(3)       --------->ARR11(3)       --------->AHL20(2)   ggatttctttcattttctatataattacaattaattaagaaaagaaatctatagcataaatatcatatatatggaaagggcaaaattcaatagcattttt  18194700                   <---------AHL20(2)                  --------->AHL20(2)                  <---------AHL20(1)      --------->ANAC58                         <----------DOF2               --------->YAB1    <---------DEAR3(2)                    <-----------GT1          <-----------TBP        <---------MYB46(3)                 <---------REM1(1)       ------->TEIL      <----------DOF2<------------CBF     --------->ANAC58        <-------GAMYB   --------------->AGL15 <----------DOF2  <---------AHL20(2)  <---------HSFB2a(2)        <-----------RAV1(1)     --------->ANAC55(2) ---------GT1 <---------YAB1     <------MYB46(1)              <-----------GT1     <---------------AGL15 ---AHL20(2)--------->YAB1       <------MYB83             <----------DOF2      <-----------GT1     --   tttcttttctttttttataataaaattgaattagttggttcgacaagtaccagttgtattcttttttctgttgtaactatatttcctttttatgtatttt  18194800      ----------->GT1                     --------->YAB1        ------------>CBF    <------------CBF            <-----------GT1                <-----------HVH21                   <-  <---------AHL20(2)         <---------ICU4                 --------->O2            --------->MYB46(3)  --------->AHL20(2)         --------->YAB1                 <---------O2    --------->YAB1         -- ------->YAB1      ----------->RAV1(2)   <---------YAB1   <---------ALFIN1 <---------YAB1    --------   ctcataaattgtataatgtacacctgttgaataataactagttttcatagcttaatttcgacacttgtcaattcttgatgataagaacaactggttttgt  18194900               --------->HSFC1(2)               --------->HSFB2a(1)               <---------HSFC1(2)         ------->TEIL       <-------TEIL  --------->AHL20(2) ----------->TBP                                       <---------GLK1(2) --------->ARR11(3) --------------AGL15                                --------->ANAC46     <---------ARR11(3) ------------->AGL15                             <-------TEIL           --------->RVE1(1) ------->AtSPL8<---------HSFB2a(1)    <XXXXXXXXXXXXXXXXXXXXMIR857       --------->CCA1(1)        ----   actataaaatgcatcgaaacttcttgtaataagacatatacaacttcaacatacacataatctctcacttaaaaatatctctctctctctctctacaaaa  18195000                 ---------->DOF2           <------MYB46(1)           <---------MYB46(3)        --------->ARR11(3)                                            --           <------MYB83              <---------ARR11(3)                                           ---          <---------AtMYB61        ----------->GT1                                                <--       <-----------RAV1(1)    --------->CCA1(2)                                                  <---   ------------>CBF          --------->ARR14(2)   <----------DOF2         <-----------GT1        <--- -------->CBF<---------ANAC46<---------ARR14(2) <----------DOF2   --------->At4g35610           <----   tcaattccaatgttggtgggaaagataagtggatatgaagataatactcgctctttggagcgagaaacatctgaaatcacttctcttctcagccaatttc  18195100        <---------ICU4 ------->LBD16 ------>LBD16                               --------->ANAC46 -------LBD16                            --------->ZAT14       <---------YAB1 ------ANAC46                          --------->ANAC46      <---------ICU4 ------LBD16       <---------MYB46(3)<---------ALFIN1        --------->YAB1 -----LBD16    ------>ZmHOX2a(1)  <-----------GT1           <---------ATHB12   cggggaatactaatgtccttgttgttgacaccaatttcaccactctactcaacatgaaacaaatcatgaaacaatacgcttatcaaggtgagtcactctc  18195200                                     <---------ZAT6 <------------MYB.PH3(1)                                    <---------TOE2(3)                    <---------ARR14(2)    <---------TOE2(3)                    --------->ARR14(2)    <---------TOE1(3)                                    <-----                   <------ZmHOX2a(1)<---------TOE1(3)       <----------DOF2                 <--------                --------->YAB1 <---------MYB46(3) <-----------GT1<----------DOF2            ---------   tctctctctctctaactatgaggatttagagagttgttagggttagggtttataacagttttcttttcttttgtgttttagtgtctattgagacagatgc  18195300     --------->ARR11(3)--------->ZAT2     <---------ARR11(3)--------->At4g35610  --------->DAG2      --------->ANAC58                                           ------->TEIL ---------->DOF2      --------->ANAC58         <---------YAB1       <---------LBD16 --TEIL    <---------ANAC58              <---------YAB1            <---------AtLEC2      <---------ARR11(3) -At4g35610<---------ANAC58           <---------ATHB12   --------->GLK1(1)    <---------WOX13(1) >At4g35610<---------ANAC46    --------->YAB1----------->GT1   <---------At4g35610   ---------->DOF2   agaaaaagctcttgcgtttttgacaagctgcaaacatgaaatcaatattgtgatttgggattttcatatgcctggaattgatggacttcaagctctcaag  18195400                   <<<<<<<<<GT-1                                                 ------>MYB46(1)                   <-----------GT1                          <----------DOF2      ------>MYB83       >                 <---------GLK1(1)                       <-----------GT1    <-----------GT1<---------        ---------->DOF2                ------->TEIL <----------DOF2       --------->AHL20(2)   ------   agcattacttcaaagttggatttacctgtagtgagtatgtgaatctcaaactctcttttttacttttaaaactaaattaaaccaaatttgtttttactaa  18195500  Previous    Next  AGI:  At1g49190.1    Description:  ARR19 (ARABIDOPSIS RESPONSE REGULATOR 19); transcription factor/ two-component response regulator. similar to ARR20 (ARABIDOPSIS RESPONSE REGULATOR 20), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G62670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44867.1); contains InterPro domain Response regulator, plant B-type (InterPro:IPR017053); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain Homeodomain-like (InterP Range:  from: 18195010    to: 18197266    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version