Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------GLK1(1)                                                  --------->At4g35610                                                  <---------YAB1                                            <---------AHL20(1)                                 <-----                                            --------->AHL20(1)                              <--------                                            <---------AHL20(2)                         <---------AHL20(2)                                         --------->AHL20(2)                            <---------AHL20(1)                                         --------->YAB1  --------->GLK1(1)             --------->AHL20(2) --------->GLK1(1)             ---------->DOF2  --------->YAB1     <-----------GT1     --------->AHL20(1) <---------bZIP60(1)   ---------->DOF2  <---------YAB1   <---------ARR14(2)     ------>ZmHOX2a(1)  <- ------>GT1        <------ZmHOX2a(1)  --------->YAB1     --------->ARR14(2) <-----------GT1 <--------   gtgatatcaattgaagttttaggaccaaagaaaaaaagaactataatatatcatcagagaattcccaattttccattttttcctactaaaatattaactt  18176700                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                               <---------At5g28300                                           <---------MYB46(3)                                           --------->MYB111(1)                                           --------->MYB46(2)                                           --------->MYB52(2)                               ---------                                     --------->CCA1(2)                                     <---------YAB1                                    --------->ARR11(3)                                   --------->YAB1                                    <---------ARR14(2)     --------->TOE2(3)            <---------YAB1                                    --------->ARR11(1)   ------>ZmHOX2a(1)            --------->YAB1 -----DOF2                         <<<<<<<<<RAP2.2  --------->GLK1(1)       <---------ARR11(3) ---GT1 --------->YAB1    --------->At5g28300  <---------DOF5.7(2)  <-----------GT1<----------DOF2 ---------DOF2           ----------->GT1   --------->MYB111(2)   <---------ICU4 <-----------GT1  >>>> -AHL20(2)          --------->AHL20(2)    <--------P<---------GLK1(1)       <---------GLK1(2) <------   tctttttctatcacaaaaaaaaaaaaatggtaaatttagatatggtagttaccgatatcctcgttaatatttactacagattttacttttatgattatat  18176800                                                                            <----------DOF2                                                                       ------>ZmHOX2a(1)         --------->AHL20(2)                                           --------->TOE2(3)           ---         <---------AHL20(2)                 --------->YAB1            --------->TOE1(3)           <-- >AHL20(2)                       --------->YAB1                <---------ANAC58                   <-- >>>>>RAP2.2             ------------>CBF <---------YAB1       <---------ANAC58                   --- ---CCA1(2) ---------->DOF2     <---------YAB1 <-----------GT1 <---------ANAC46                  ----   ctaaacaaaaattaaaaaggaaaacaaaacaattctcataaactattaataacgtcttctatgtttcgtcttccttagctttgccataagctccttgaat  18176900                                   <---------YAB1                                 --------->YAB1                                --------->ICU4                             <---------TOE1(1)                             <---------TOE2(1)          <---------ALFIN1  <-------TEIL <---------YAB1             --------->SPL7                                            <---------AHL20(2) ------>AHL20(2)          <---------SPL7--------->TOE1(3)                      <---------TOE1(3) -------AHL20(2)        --------->ANAC58--------->YAB1                         --------->MYB59 -------AHL20(1)        <---------------AtSPL8                                 <---------TOE2(3) ------>AHL20(1)        --------->ANAC58--------->TOE2(3)                <---------TOE2(2) ----->AHL20(2) ----------------->AGL3------->TEIL                       <---------TOE1(2)      -----   tttatttttgacacactctccataacaaggtacgatgatgaatcttaactatgttttctgttcaagtttttctcccatgtttaggtttttaatctctatc  18177000                                                   --------->GLK1(2)                     <------------CBF             --------->ARR11(3)     --------->ZAT14                   <---------ZAT14                <---------GLK1(2)      <---------ZAT14       ------>MYB83--------->ZAT14        <------------CBF          --------->LBD16         ---------       ------>MYB46(1)                  <---------AHL20(2)        <---------LBD16           <--------     --------->MYB46(3)                 <---------YAB1           --------->MYB52(1)     ------------>CBF ---->ZAT6     --------->ZAT6          <-----------TBP  <---------MYB52(1)      <------NtERF2--------   tctatcaccaactcaaaacactacattgttttttttttggtttttattgtaagattctgttacttagtaccggagtttagtcggagagagaacaatgatc  18177100                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                     ------>NtERF2                                                                    --------->DEAR3(1)                                                                   --------->ATERF1(1)                                                                   <---------ABI4(2)                                                                  ------>NtERF2                                                                  <---------ATERF1(1)                                                                 --------->RAP2.6(2)                                                                 --------->ANAC58                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                --------->SPL7                                                             --------->HSFB2a(2)                                                             <---------HSFB2a(2)                                                            =========================HOX2a_HOX2a                                                            ------>ZmHOX2a(2)                                                         -------->HAHB4  <---------GLK1(2) >ICU4                                                  --------->ICU4<------NtERF2 -ATHB12                                              --------->YAB1<---------ALFIN1        ------->TEIL ->YAB1              ------>ZmHOX2a(2)      <---------ZAT6--------->ARR11(3)  ------>ZmHOX2a(1)     <   agtttcagagaagagaacatcgatctcaacttgattaaaacaattagtgtaatctgtaatgatccagacgccaccgattcctctagcgacgatgaatcta  18177200                                                            <------ZmHOX2a(2)                            >>>>>>>>>>MYB80                 --------->CCA1(2)                   <------NtERF2                           <---------AGP1                   <---------MYB52(1)                      --------->AGP1                  <---------RAP2.6(3)                      --------->ARR14(2)                  ------>NtERF2                            <---------ARR11(3)                  <-----------HVH21              <---------ANAC58              --------->ANAC46                   <---------ANAC46             ------>ZmHOX2a(1)--------->AtMYB61  <---------O2             ==================HOX2a_HOX2a       <---------ANAC58        --------->YAB1<---------At4g35610        --------->O2------>ZmHOX2a(2)       <---------ATHB12 <------ZmHOX2a(2)        <---------ANAC55(2)     <---------At4g35610       --------->ICU4 --------->At4g35610        --------->ANAC55(2) ----------->HVH21  ------>NtERF2  --------->ATERF1(2)             <---------ANAC55(1)--------->DEAR3(2)        -------  --------->LBD16--------->RAP2.3(3)          <---------MYB52(1) <-----------HVH21            <------ <---------ETT(1)--------->DEAR3(1)  --------->MYB52(1)    --------->ARR11(3)         --------->CCA1(2) --------->ANAC46<---------ATERF1(2)--------->AtMYB61      <---------ARR14(2)    ---------->DOF2 ---------LBD16 --------->RAP2.3(1)--------->MYB46(3)  ---------->DOF2------>NtERF2--------->DAG2   tctccggcaataatcctcgccgtcagatcaaaccaaaaccaccgaaacgttacgtctcaaagatctgtgtcccgacgctgatcaaaaggtatgagaacgt  18177300                                                                                                    -                                                                                                 ----                                                                                         <---------ANAC46                                                                                        ------>NtERF2                                                                                        --------->ATERF1(1)                                                                                        <---------LBD16                                                                                        <------NtERF2                                                                                      <---------RRTF1(3)                                                                                      <---------RAP2.3(2)                                                                                      <---------DEAR3(1)                                                                       <---------ANAC58 <---------At4g35610                              <---------LBD16                          <---------ANAC46<---------RRTF1(1)                           --------->ARR14(2)                     --------->ATERF1(1) <---------RAP2.3(3)                           <---------ARR14(2)                  <---------LBD16        <---------RAP2.6(2)                         --------->LBD16                     ----------->HVH21        <---------RRTF1(2)                        --------->RAP2.6(2)               <---------SPL7             <---------LBD16<                       <---------LBD16                   <---------ANAC58      ----------->ARR10 ----                      --------->ZAT2       <------NtERF2 <---------ANAC58   <---------ANAC46   ------                      --------->At4g35610 <---------SPL7 <---------ANAC46--------->ALFIN1<---------DEAR3(1)          --------->ANAC46<------NtERF2  <---------DEAR3(1) --------->SPL7  ----------->GT1<------NtERF2 -->HSFB2a(1)    --------->DAG2        <-----------HVH21<-----------------------TaNAC69(2)--------->LBD16 ---HSFB2a(1)   ---------->DOF2 --------->LBD16     ---------->DOF2    <---------ANAC58<---------RAP2.3(1)   ttcgaattctacagggaataaagcagccggaaaccggaaaacgtcgtcgggtttcaaaggcgtacgacggaggccgtgggggaaatttgcggcggagata  18177400                                                                       ---------->DOF2                                                                     --------------->AGL15                                                                    ----------------->AGL1                                                                    ----------------->AG         <---------HSFB2a(2)      <---------HSFB2a(1)          <---------HSFC1(2)      <---------MYB52(1)          --------->HSFB2a(1)    <---------At4g35610 -------->GLK1(1)          <---------ANAC46              --------->At4g35610 ----->ANAC58              <---------ANAC58             ----------->RAV1(1)    ---------->DOF2 ---------GLK1(1)          <---------ANAC58           --------->At4g35610  ----------->GT1 ----->ANAC58        --------->DAG2              >>>>>>>>>TBF1 --------->HSFC1(2) --->CCA1(2)        ---------->DOF2      ------>ZmHOX2a(1)     --------->At4g35610               ----   agaaatccgtttgagaagaagagaaagtggcttggaacgtttcctactgaagaagaagcagcagaagcttaccaaaagagtaaaagagagtttgatgaac  18177500                                                        <---------ANAC55(2)                                                    --------->ALFIN1                                                  <---------ANAC46                                                 <---------DEAR3(1)                                                --------->SPL7                                                <---------ZAT14                                                <---------ABI4(1)                                                --------->ZAT14                                               --------->ALFIN1                                              <---------SPL7                                             <---------ANAC58                                             <---------ANAC58                                          --------->ANAC58                                          --------->ANAC46                                          ------>MYB83  --------->ANAC46                                          ------>MYB46(1)                                     >>>>>>>>>>WRKY26   --------->ANAC58                                     >>>>>>>>>>WRKY38   --------->ANAC58                                     >>>>>>>>>>WRKY43   --------->ANAC55(2)                 <------ZmHOX2a(1)  --------->WRKY38(1)------->TEIL       ----------->GT1  --------->ARR11(3)--------->ANAC58                                          -  <---------ANAC46  ---------->DOF2 ----------->HVH21<---------SPL7                            ------ ----->ATHB12  ----------->GT1   <---------ARR14(2)<---------------AtSPL3                <-----------   gattgggtttagttaaacaggaaaaagacctagtagatttgaccaagccgtgcggtgtacgtaaaccagaagagaaggaagttactgagaagtcgaattg  18177600  Previous    Next  AGI:  At1g49120.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF117 (ERF117) [Arabidopsis Thaliana] (GB:Q9M9B2); similar to CRF3 (CYTOKININ RESPONSE FACTOR 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G53290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69165.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18177095    to: 18178084    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version