Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------AHL20(2)                                                   --------->AHL20(1)                        --------                                                   --------->AHL20(2)                  --------->DAG2                                              --------->AHL20(2)                   ----------->GT1                                              <---------AHL20(2)       <---------YAB1 ---------->DOF2                                          --------->AHL20(2)<---------AHL20(2)    --------->DAG2                    ---------->ID1      --------->AHL20(2)  --------->AHL20(2)  ---------->DOF2   tcaattgtttcaaactgcatttgtcttaacaaaattcaaaaaaaaaatataaattttttgaaataaatgttttataaatatcaaaaggtaaagctacact  18135900                                                                                                <----                                                              <------ZmHOX2a(1)--------->DAG2  ------                            <---------------------WRI1      <---------TOE2(3) ---------->DOF2 -------      <---------AtLEC2  <---------AHL20(2)                 --------->YAB1---------->DOF2      <------ ->REM1(1)              --------->AHL20(2)      ---------->DOF2 <------ZmHOX2a(2)            --------   aatcttttgcattgtattcgagtaatataaatcgaaatgaccaaagtctctaaagaatgaataaggatcaaatttcaaagaaaagtgaagagtaatcgtc  18136000                                                                         <---------ANAC58                     <---------ZAT18                                    ------>ZmHOX2a(2)                     --------->ZAT18                               <---------WOX13(1)                    <---------ANAC58                             --------->ATHB12       <-----------ARR10        ------>ZmHOX2a(1)            ------>MYB46(1)                        -      <---------GLK1(2)       ----------------->AG           --------->MYB52(1)                  <--- -----WRKY12        <---------ANAC58   ----------->HVH21     ------>MYB83<---------ANAC58        ---- --->DOF5.7(2)     --------------->AtSPL8                  <---------MYB59                     ------ -->TOE2(3)        --------------->AtSPL3                 --------->ANAC58              --------->DAG2 -----HVH21     ------>ZmHOX2a(1)  <---------YAB1         --------->ANAC46             ---------->DOF2 ->YAB1--------->GLK1(2)   <----------DOF2                --------->ANAC58         <---------TOE2(3)-   aactacaagaatcttatcctatgcgtactctttccttatgagtgacacaatagaaaacaaacccaactgattgatccttgtgaataagataaagtcccaa  18136100                      <-------MYC3                      ------->MYC2                      ------->MYC3                      <-------MYC2                    ---------->TaMYB80                    --------->ARR14(2)                    <---------ARR14(2)        <---------ANAC58        <---------ANAC58--------->ZAT18        --------->ANAC55(2) ------>TEIL      --------->LBD16               --------->LBD16 ------ATHB12    <---------ANAC46          --------->YAB1                        <---------ARR14(2) ----->MYB46(3)------>ZmHOX2a(1)    --------->ZAT14                          --------->LBD16 --->WOX13(1) --------->TOE2(2)     <---------ZAT14                     --------->YAB1 ------->P    --------->TOE1(2)  ------>ZmHOX2a(1)  <---------ARR14(2) <---------YAB1               <   tcaacctcttacttatcctgcgcatatgcactgtcctctatactatcatgcgcatatacaaatgtccattcttatcatgcgcatatacaaatgtccattc  18136200                                                                    ----------->HVH21                                                                  --------->At4g35610                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                                 <-----------ARR10                                                                 --------->GLK1(2)          --------->AtMYB61                                     <---------GLK1(2)        ------->TEIL                --------->DAG2      --------->DAG2       <---------ALFIN1  ------>MYB83                 ---------->DOF2      <---------ZAT18    ------>MYB46(1)          --------------->AGL15      --------->ZAT18  <---------MYB59      --------->ANAC46---------->DOF2                     ----- --------->YAB1        <---------MYB46(2) <-----------GT1----------->GT1             <---------ANAC58 ---------YAB1      <-----------GT1---------->DOF2<---------------AGL15              <---------ANAC58   ttatcatgcgcacctcaacttaataccaaacaaaaaaaaaagtttcacaaaactccaaaaggtaaagaatctgacccattcacatatgcgtttcaaaaac  18136300                                                                                               ------                                                                                             <------NtERF2                                                                                         <---------ANAC46                                                                                         <---------MYB46(3)             *TSS                                                                        <---------bZIP60(2)           <---------ALFIN1                                                             <---------AtMYB61           --------->AtMYB61                                         --------->ANAC58   --------->ALFIN1        --------->ANAC46                                             --------->ANAC58  <---------ZAT14       --------->ZAT18                                        --------->ICU4           --------->ZAT14  --------->YAB1         ---------->DOF2                    ---------->DOF2            --------->ZAT18 ---->ZAT6--------->ANAC46                   ------------------------>ANAC81          --------->ALFIN1   actatcatgtccaccacacgattaaaccaaagagaagagagagagagagagaaacagagaagaaaagattgaagcaatcgaatggagagtgtggtggcaa  18136400                                        <-------GAMYB                                       <---------ANAC46                                       <---------ANAC58                               --------->ANAC58                 --------->MYB52(1)               ----                               --------->ANAC58         <------ZmHOX2a(1)                 <---------ANAC46                               --------->ANAC46   --------->REM1(2)                       <---------ETT(2)                          <---------HSFC1(1)      --------->ZAT14              <----------ID1<<<<<<<<   --------->At4g35610    --------->HSFB2a(2)     <---------ZAT14        <------ZmHOX2a(2)--------->bZIP60(1)   <---------At4g35610    <---------HSFB2a(2)    <---------ANAC46      <------ZmHOX2a(1)  <---------bZIP60(1) ----->RAV1(1)   ---------->DOF2       <---------ANAC58 ========================HOX2a_HOX2a  <-------   catggagcagagaagaagagaaagcattcgagaacgcaattgcgttgcattgtgtagaggaagagataacagaggatcaatggaacaaaatgtcgtcaat  18136500       ---------->DOF2    ------>MYB83                                            --------->ANAC46    --------->ANAC58                           --------->HSFB2a(2)    --------->ANAC58                        ------>ZmHOX2a(1)    <---------ATHB12    --------->ANAC46                        <----------DOF2 --------->ANAC58    ------>MYB46(1)                     --------->ARR14(2)  --------->ANAC58    --------->AtLEC2                    <---------ARR14(2)---------->DOF2                        <---  XXXXXXXXXXXXXXXXXXXX>MIR1887         ------>MYB46(1) <-----------HVH21                         ---- ----->YAB1             ---------->DOF2------>MYB83  --------->ARR11(3)             <----------DOF2 <WRKY18             ----------->GT1 <---------MYB59 <---------ARR11(3)         <---------ARR11(3) --WRKY12   --------->TOE2(3)  <---------ICU4  <---------HSFB2a(2)         --------->WRKY18(1)  <----   ggtaccaagcaaagccttagaagaagtaaagaaacattaccaaatccttttagaagatgtcaaagcaatcgagaatggtcaagttcctttacctcgttat  18136600                                       <---------At4g35610                                    --------->At4g35610                                    <---------At4g35610                                   =========================RAV                                   ----------->RAV1(1)                                 --------->At4g35610                                 --------->ZAT2 ==================RAV            --------->At4g35610                                 <---------At4g35610     ------->GAMYB           ----------->RAV1(2)          <---------ARR11(3)    ============================RAV                  <---------At4g35610      --------------------->WRI1----------->RAV1(1)   ----------->RAV1(1)     =======================      ---------->DOF2         --------->At4g35610 ------>ZmHOX2a(1)           <------ZmHOX2a(2)    --------->LBD16           --------->ZAT2    ----------->RAV1(2)          <---------ARR11(3)   --------->ANAC46           <---------At4g35610 ===================================HOX2a_HOX2a   --  <---------LBD16            ----------->RAV1(1)<---------At4g35610       --------->HSFB2a(2)    <--- ------ICU4             ---------->DOF2--------->At4g35610               <---------LBD16         ---- ----->YAB1            <---------REM1(1)   --------->REM1(1)            ------>ZmHOX2a(1)       ----- -----YAB1--------->ARR11(3) ===============================RAV         =============HOX2a_HOX2a-----   catcaccgcaaaggtctcatcgtagatgaagcagcagcagcagctacttctcctgccaacagagactctcattcctctggatcatctgagaagaaaccaa  18136700          <---------LBD16       <---------ALFIN1       --------->AtMYB61       --------->DEAR3(1)      --------->At4g35610      <---------ZAT2      --------->ATERF1(1)                            --------->At4g35610      <---------At4g35610                            <---------ZAT2     ------>NtERF2                                   --------->ZAT2     <---------ATERF1(1)                      <---------ANAC46    <---------ALFIN1                          <---------ANAC58 ------>ZmHOX2a(1)                            <---------ANAC58 =======HOX2a_HOX2a                          <------NtERF2 --------->RAV1(2)                       <---------MYB46(3) ------ARR14(2)                         --------->ALFIN1 ----->ARR14(2)      --------->At4g35610<---------AtMYB61                    --------->GLK1(1) ->MYB83 <---------LBD16         <------ZmHOX2a(1)   <---------At4g35610--------->DAG2 ->MYB46(1)--------->LBD16  <---------ATHB12<---------MYB46(3)         ---------->DOF2   atcctggcacctccgggataagtagctccaatggaggaagaagtggtggctcgagagctgagcaagagagaagaaaagggattccatggactgaagaaga  18136800  Previous    Next  AGI:  At1g49010.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G08520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68017.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 18136313    to: 18137593    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version