Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->ANAC58                                                                                     --------->ANAC58                                                                               --------->AtMYB61              <-----------GT1                     ----------->GT1             --------->MYB46(3)     <---------ZAT6--------->ANAC46     ------->TEIL   --------->CCA1(2)    --------->ANAC46      >>>   ccagtaagtgttattttttccaaacaacaagttttctgtttgaacctatagatggtgatacaagaacagaaccaatacaaaccacactagccaacatgtt  18107900                                                                                                   <-                                                                                         <-------TEIL                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR11(3)                                                                                       --------->AGP1                   --------->MYB59                                                     <---------ARR11(3)                   --------------->AtSPL8                                             --------->GLK1(1)                --------->ICU4                            <------ZmHOX2a(1)           <---------GLK1(1)           ----------->GT1                             <---------LBD16      ----------->GT1        << >>>>ZML2 --------->ALFIN1             --------->TOE1(2)  =====================================HOX2a_HOX2a   ctagttgaagaagtggtaattttggtactagttttgcaattcatacgatggtatttatcaggaagtatcaattttggaatgtattaagagatccattgta  18108000                                                                                                   --                                                                                         <-------MYC3                                                                                         ------->MYC3                                                                                       <<<<<<<<<<BZIP12                                                                                       <<<<<<<<<<ABI5                                                                                   ----------->HVH21       <---------ZAT14                                                       ------>NtERF2       <---       --------->ZAT14     <---------ARR14(2)                               --------->bZIP60(2)  ----    ------>MYB83           --------->ARR14(2)                               --------->ANAC58     <---    ------>MYB46(1)   <---------ANAC58                                      --------->ANAC58     ----  ------->GAMYB       <---------ANAC46                 ------>MYB46(1)      --------->ANAC46     ---- --------->MYB46(3)   <---------ANAC58                 ------>MYB83         --------->O2<---------O2 ----------GT1 --------->ANAC58                      --------->AtMYB61    <---------ATERF1(1) <------ <<<<<<<GT-1   --------->ANAC58  ------->TEIL      <---------ARR11(3)     <---------ALFIN1 --------->WRKY38(1)   ttaaccaactatactgcaagcattgtgtgtatatggacttactccttgagcaagaccatccttgagaccagaagggccacgccatttgacacgttgagca  18108100                                                                                          ------>NtERF2                                                                                          <---------At4g35610                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                      <---------MYB46(3)                                                                                     <--------P                                                                                    <-------GAMYB                                                                                   <---------MYB46(3)                                                                                  <------NtERF2                                                                                  <---------DEAR3(1)                                                                                 --------->LBD16                                                                                 <---------LBD16                                                                                 ------>NtERF2                                                                                <---------ANAC46    --------->HSFC1(2)                                                          ------------>AtMYB77    <---------HSFC1(2)                                                         --------->ATERF1(1) <------NtERF2                                                                ------>NtERF2  ------>NtERF2 ------->ATERF1(2)                                         --------->LBD16    <---------ATERF1(1) ------ZAT2    ------>ZmHOX2a(2)                          --------->ANAC55(2)----------->HVH21 ------->RAV1(2)          ---------->DOF2                 <---------ANAC46   --------->DEAR3(1) ------At4g35610  --------->WRKY38(1)              --------->ZAT18         --------->At4g35610 ----->At4g35610<-------GAMYB                      <---------ZAT18<---------------AtSPL8<---------RAP2.6(2) ----->ZAT2----------->HVH21           --------->ARR11(3) <---------ANAC58 <---------At4g35610 ---At4g35610  <---------MYB46(3)      <---------ARR11(3) <---------ANAC58 ----------->RAV1(2)   gctggcaacttccctgatcgttgagcctcaaagaacaagaaggtcttatcaagagcacttccgtagttatagtactccgctgccgcggttgctgccgcta  18108200                                         ------>MYB83                                         ------>MYB46(1)                                       <---------MYB111(2)                                       --------->AtMYB61                                       <---------MYB46(2)                                       <---------MYB55(2)                                       <---------MYB111(1)                               <---------ATHB12    <---------CCA1(2)                        --------->DEAR3(1)       <---------ICU4                       --------->ANAC46--------->MYB46(3)                     --------->ANAC46 --------->ANAC46                  <---------SPL7--------->YAB1  ------>ZmHOX2a(1)                 <---------ANAC58  --------->MYB46(3)                 <---------ANAC58  ====================HOX2a_HOX2a     <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->TOE2(3)                                    < --------->MYB52(1) --------->SPL7 ------>ZmHOX2a(2)           --------->WOX13(1)       ---------->DOF2   gaagaacggacagcaataggcttacgccgaacaatgatccaccaaacttcctcatttctctatgtcaatctaagttctaagttttctctccaaagaaatt  18108300                                                     --------->AHL20(2)                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                            <---------DEAR3(1)                                     <-                                           --------->ALFIN1                                        <-                                         --------->TGA1a                                           <-                                         <---------TGA1a                                           <-                                         --------->O2<---------AHL20(2)                            <-                                         ========================================bZIP_DOF         ---                                         <---------ANAC58                                         <--                 ------->TEIL            <---------O2<-----------TBP                     ------->TEIL            ----------->GT1  *TSS        <---------ANAC58                         <------------CBF--- ----------DOF2  --------->GLK1(2)  --------->ZAT14<-----------TBP    ---------->DOF2 <---------ANAC46   ttctttgttcaaaattgtgaatctatgatgtgagttagtatagacgtgggtgtatttatatagacatgttgagaaagagagagagattgtgtatgtgagt  18108400   --------->ALFIN1 <---------ANAC58 <---------ANAC58 <---------ANAC46                     --------->ANAC46          <----------DOF2 --------ANAC58                       --------->ANAC58   -------->ATHB1 -----MYB83                           --------->ANAC58   <---------ICU4 --------ANAC46                      <-------TEIL        --------->YAB1 --------ANAC58                  --------->MYB59         --------->ATHB12                       ----- -----MYB46(1)                   <---------------AtSPL8 <---------ATHB12                 <----------DOF2 ------>MYB111(2)           --------->AHL20(2)          <---------YAB1            <---------ANAC58 -------AtMYB61<------ZmHOX2a(1) <---------------AtSPL3 --------->ICU4<----------DOF2<---------TOE1(2) ------>MYB46(2)          --------->GLK1(2)           --------->YAB1---------->ID1<---------ANAC58 <-   ttggtgtgtgagagagaggaatgtagagaatcaaataggtacgaaacttgtctgaataatcattgtctttgtctttttttgtgttcgtgtgttttatgtg  18108500                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ======                                                                                               ------                                                                                               <-----                                                                        --------->At4g35610    <-----                                                                     ================================     --------->YAB1                                            <---------ANAC46                ------    <---------YAB1    --------->ANAC55(2)                    <---------ANAC46                  <-----  --------->YAB1   <---------REM1(2)                      =========================================== -->TEIL     <---------RAP2.6(2)                   ------>ZmHOX2a(1) ---------->DOF2           <----- ---------DOF2<---------ZAT18             <---------O2    <----------DOF2                    <-------   cctttgataatagttgtggccttcacgttttgttagagcttctcacgttgttcctcgagacttttgtgtataaaagctgaatcaactatgcctcaccacg  18108600 ------>REM1(2) ---MYC4 ---PIF5 -->MYC2 ---MYC2 -->MYC3 ---MYC3 -->PIF5 -->MYC4 =======================MYC_MYB --->TGA1a ----ANAC55(2) ----ANAC46 ====bZIP_DOF --->O2             <---------AtLEC2                               ------->TEIL ----O2            <---------MYB46(3)                              --------->ARR11(3) ====bZIP_DOF      --------->MYB55(2)                             <---------CCA1(2)                 - ----TGA1a       <---------MYB52(1)                            ------->TEIL                ---------- --ALFIN1       <-------GAMYB               ------->TEIL  --------->At4g35610             <----------   tgtatacctcttattcgccgttggatggaagcgttattgactaatgcatttgatagaaacagatgaatgtatcttgttttaaaattttaaaaatggtaca  18108700            <---------WOX13(1)          <---------ANAC55(2)           <-------GAMYB                --------->ANAC55(2)          <------MYB83         <---------ZAT14           <---------ARR14(2)   --------->AHL20(2)         ----------->HVH21    <---------ANAC58                   ---------->ID1   --------->YAB1    --------->YAB1     --------->ANAC55(1)                     --------->ATHB12----- -------->YAB1      <---------YAB1      --------->ANAC58 --------->ARR14(2)    <-------TEIL   <------ ->GT1    <------MYB46(1)   --------->ALFIN1       <---------ANAC58--------->AtLEC2 <-----------RAV1(1) -----AtSPL8<--------P   --------->DAG2 --------->ANAC58--------->GLK1(1) --------->AHL20(2)---------   aagaataatatttggttgatttttgataaggtgtgaacggacaagtaatccattcgtggtatccacttcttgcaaaaaaaattcatttgtcgctcgattg  18108800  Previous    Next  AGI:  At1g48930.1    Description:  ATGH9C1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C1); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 5 precursor [Arabidopsis Thaliana] (GB:Q9M995); similar to ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G64390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42020.1); similar to Endoglucanase 13 precursor (Endo-1,4-beta glucanase 13) (OsGLU6) (GB:A2XYW8); similar to hypothetical protein OsI_017261 [Oryza sativa (indica cultivar-group)] (GB:EAY96028.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro Range:  from: 18105311    to: 18108329    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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