Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------YAB1                                                  <---------ICU4                                                  --------->YAB1                                                 <---------YAB1                                                 --------->ICU4                                               <---------ICU4                                               --------->YAB1                                               -------->HAHB4                                            --------->YAB1                   -------->HAHB4           <---------ICU4                   <---------ICU4          <---------YAB1                  <---------YAB1        ----------->GT1           ---------->DOF2          --------->AHL20(1)         <---------YAB1             --------->AHL20(2)     --------->SPL7--------->YAB1   <---------AHL20(2)                                      ---------    --------->MYB52(1)      ------->GAMYB--------->YAB1                 ----------->GT1  <---------ANAC58  <---------MYB52(2)       --------->MYB46(3) --------->ICU4           --------->DAG2    <---------ANAC58 ------->DOF2     --------->ICU4   --------->AHL20(2)                 ---------->DOF2    <---------ANAC46 -----------------WRI1   --------->MYB52(1)--------->ICU4          <---------YAB1   <---------ATHB12   agaagcgaacgatgaaagtaatgataacaacggccaaaaaaattgataattatgatgacaagaaggaatatgaaaagtaataaacaatgaagcgtgaaga  18058500                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                            <---------AHL20(1)                                                                            --------->AHL20(1)                                                                       <---------AHL20(2)                                                                       <---------AHL20(1)                                             <---------AHL20(2)   <---------YAB1       --------->ZAT6                             --------->AHL20(2)         <---------YAB1 --------->AHL20(1)                  ----------->HVH21         --------->AHL20(2)<----------DOF2        <-----------GT1 >REM1(2)      --------->ALFIN1   --------->YAB1   <---------TOE2(3)  --------->AHL20(2)   gaaatacgaagacataggtgttgacagccaattgaataagaaaacataaaattgatgtatgattctttttgattatattttattgtttaacactattgat  18058600                                                          <---------TOE2(2)                                                          <---------TOE1(2)                                                    --------->WOX13(1)        <---------ARR11(3)                                                  ------------>CBF            --------->AHL20(1)                                               <---------YAB1                 <---------AHL20(1)      --------->ICU4                          --------->AHL20(2)              --------->ARR11(3)   <---------YAB1 <---------ANAC46    <-----------GT1  --------->YAB1<-----------GT1   <---------AHL20(2)    <---------TOE2(3)   --------->YAB1      <---------AHL20(2) --------->YAB1 ----------->GT1<---------TOE2(3)--------->YAB1------->TEIL --------->AHL20(2)   -----   tttttataatttttaagatggtgtatttagattaagaattttacaaattataatcaatcgtatgtatatttttacaaaaatatatcaaaactatctatgt  18058700                                                                                        <---------MYB52(2)                                                                                       ------>MYB46(1)                                                                                       ------>MYB83                                                                                     <---------MYB111(1)                                                                                   -------->P                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                                --------->CCA1(2)                                          --------->TOE2(3)                    --------->ARR14(2)                                     <---------YAB1                            <---------ARR14(2)                                  <---------AHL20(2)                           <---------ARR11(3)               --------->TOE2(3)  <---------YAB1                               >>>>>>>>>GATA-4        --------->AHL20(2)     <---------ARR11(3)                              --------->ARR11(3) <---------ANAC58              --------->AHL20(1)                              >>>>>>>>>GATA-2 <---------ANAC58     --------------->AtSPL8 ---------->DOF2                   >>>>>>>>>GATA-3      - ----------->GT1 ------>MYB46(1)  --------->AHL20(2)                           --------->AGP1<------- <---------ANAC46------>MYB83  <---------AHL20(1)                              >>>>>>>>>GATA-1     -- ---->ALFIN1   <---------MYB59 --------->AHL20(2)       --------->AHL20(2)    --------->GLK1(1)   ---   gtagcgtgaatttaaaacctaatctaagtactatatattattaaacttaaagaacagattaaaaacgaagttcaaatcagagatctaccaactaaacaaa  18058800                                                                                                  ---            ------->MYC3                                                               --------->At5g28300            <-------MYC3      <------------CBF              <---------LBD16            <------NtERF2  --------->AHL20(2)         --------->ATHB12              ----------->RAV1(2)        <---------MYB46(3) ---------->GT1           <---------bZIP60(1)    <------MYB46(1)                     <---------ANAC46 --------AGL15            --------->bZIP60(1)    <------MYB83                        <---------DREB2C(2) ------->DAG2           <---------ZAT14          <---------ANAC46                    <---------DEAR3(1) ------->DOF2           --------->ZAT14     <---------AHL20(2)                  <------------CBF  ---   aaaagtaaataaaacgtgtttctctgtgaagtcattgctctagtataaatttggtggagaaacctggagtttagttccataccattggcggtgaacatgg  18058900                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                =====                                                                                                -----                                                                                                =====                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                           <-----------GT1      -----                                                                          <-----------GT1      <-----                                                                    <---------MYB52(1)         ------                                                                   ------>NtERF2              ------>NtERF2                                                                   --------->LBD16            <------                                                                  <---------LBD16            --------                                                                  <---------RAP2.6(2)        --------                                                                  --------->ANAC46           --------                                                                 <---------LBD16           <---------At4g35610                                                               <---------ARR14(2)          --------->At4g35610                                                               --------->ARR14(2)     <----------DOF2                              ------>ZmHOX2a(2)               <---------GLK1(1)       =============== ------>ANAC58              <---------AGP1                   ------->TEIL<---------AHL20(2)---------- ------>ANAC58             <---------CCA1(2)           --------->AtMYB61 --------->AHL20(2)--------->LBD16   aagccataagagtttttggactaaaacttggatctaaactctctattcattctcagaccaatgcatttccggcatttaaactctctcgctttccgctgac  18059000       --------->LBD16      <---------HSFB2a(2)      --------->ANAC46      --------->LBD16      --------->HSFB2a(2)     <---------LBD16     --------->HSFB2a(2)     <---------HSFB2a(2)    <---------LBD16 ------>TGA2(2) --------TGA1 -----O2 -----TGA2(1) -----TGA1a ===================bZIP_DOF ---->ANAC55(2) ===================bZIP_DOF ---->TGA2(1) ---->O2 ---->TGA1a -----bZIP60(1) ---->bZIP60(1)                                                  --------->At5g28300 ------STF1                                                    <---------DEAR3(1) ----->STF1                   ------>ZmHOX2a(1)             ----------->HVH21 ---TGA2(2)         --------->ARR11(3)                   <----------DOF2 ->WRKY12         ------->TEIL<----------DOF2           <---------ANAC58 --->TGA1---------->DOF2  <---------ARR11(3)       ------>ZmHOX2a(1) --->HVH21 --------->ANAC58 ==============================HOX2a_HOX2a       <---------ICU4 =====bZIP_DOF --------->AtLEC2       --------->ZAT18   <---------ANAC58   <---------AHL20(2) ->RAV1(2) --------->ANAC58 ------>ZmHOX2a(2)      <----------DOF2   ----------->GT1<---------ARR14(2)   gtcatttcccggaaagcatgcacatcttgatcctttgaaggccactactcatcctttggcttttgacggtgaagaaaataatcgcgaattcaaaaatttg  18059100                                        <---------ARR11(3)           <---------MYB52(1)                                        --------->ARR11(3)          <-------GAMYB--------->CCA1(2)                              <---------At4g35610                   <---------RAP2.6(3)    <---------YAB1                              --------->At4g35610                 ---------->ID1--------->ARR14(2)     <---------YAB1      ========================HOX2a_HOX2a  <---------ANAC58  <---------ARR14(2)  <  ------>ZmHOX2a(1)      ------>ZmHOX2a(1)------>ZmHOX2a(2)   <---------ANAC58 <------ZmHOX2a(1) <---   ggtccttctgaatggggtcatcaattcctctctgctcatgttgatctctcagtaagtctctgtctcttgccgttatatagaggatatgaattcatgctta  18059200                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                               --------->MYB52(1) --------->At4g35610      <---------AHL20(2)                                   --------->DAG2         ----------->RAV1(2)     <---------AHL20(2)                              --------->ANAC58         --------->ARR11(3) <----------DOF2                                     --------->ANAC58         <---------ARR11(3) ---------DAG2                           --------->CCA1(2)---------->DOF2    <---------CCA1(2) ------CCA1(2)               <----------DOF2       ---------->DOF2           <---------GLK1(1)    ---   taccttttttattttgaaggaaatggatgcgcttgagagagagatagaggcactaaagccaaaagtaagggacatgttgatatcttctgagtcgagcaag  18059300                                                                --------->ANAC58                                                                --------->ANAC58                                                                <---------TOE2(3)       ------>ZmHOX2a(1)                              ==============HOX2a_HOX2a       <----------DOF2                                <------ZmHOX2a(1)   --------->GLK1(2)                                <---------------------WRI1   <---------ARR11(3)                              --------->HSFB2a(2)   --------->HSFB2a(2)   --------->ARR11(3)                              <---------HSFB2a(2)   <---------HSFB2a(2)   <---------ARR14(2)<---------ANAC58             <---------ANAC46 ---------->DOF2                 <-   --------->ARR14(2)<---------ANAC46     <---------CCA1(2)  <------ZmHOX2a(2)                ------- -------->GT1        <---------ANAC58     --------->GLK1(1) --------->ARR11(3)           ---------->DOF2   aagaaaatcctttttctatatttgcttgtgagtcttggtctcgcatatcatttcgaggatgagatcaaggaaagtctagaagatggtcttcaaaagatag  18059400  Previous    Next  AGI:  At1g48820.1    Description:  terpene synthase/cyclase family protein. similar to terpene synthase/cyclase family protein [Arabidopsis thaliana] (TAIR:AT1G48800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16214.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpenoid synthase (InterPro:IPR008949); contains InterPro domain Terpene synthase-like; (InterPro:IPR001906) Range:  from: 18058897    to: 18063035    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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