Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ANAC46                  --------->ANAC55(2)                  <---------ANAC55(2)               --------->ICU4                                 --------->YAB1          --------->ANAC55(2)                            <---------ANAC55(2)     <---------------AtSPL8                              ----------->GT1     --------------->AtSPL8                    <---------STY1(2)  ---------->DOF2 <---------ANAC55(1)          --------->STY1(2) ----------->GT1 ------->TOE2(3)<---------ICU4  <---------AHL20(2)       <---------ANAC46 --ARR11(3) --------->AHL20(2) <---------ARR11(3)        <---------ANAC58 ->ARR11(3) <---------AHL20(2) --------->ARR11(3)        <---------ANAC58     --------->AtLEC2 >YAB1    <---------ANAC55(2)  <---------AHL20(1)       <-------TEIL   <---------AHL20(2)   ---------   ttcttaaagagtacttaattatgtgtttttgtatatatttcaaatgtctagctagggatgcgtataatggtatataatacatgctaatgcccaaatataa  18030300                                                                                  --------->AHL20(2)                                                                         --------->AtMYB61                                                                         <---------------AGL15                                                                        ----------------->AGL2                                                                      --------->ANAC46        -------                                                   ---------->DOF2    --------->ANAC58        <------                                          <---------ICU4              --------->ANAC58    ---------->DOF2                                          --------->ATHB12    <----------DOF2   ----------->GT1    --------->ICU4      --------->LBD16  --------->ICU4       <---------DAG2    --------->ANAC58 >YAB1    ------->TEIL --------->LBD16   <---------YAB1    <-----------GT1      --------->ANAC58   catgaactgatgaacctatgcaaacccgagaaacaaaaacttgattattggaagaaagaagtcacttttctcacaccaaaacaagaaaatataaaagata  18030400                                                                   <---------ANAC55(2)                                                                   --------->ANAC55(2)                                                           <---------TGA1a                                                           --------->TGA1a                        --------->AHL20(2)                 <---------O2                      <---------AHL20(2)                   ==========================================                      --------->AHL20(2)                   --------->O2                    <---------AHL20(2)                     ==========================================                    --------->AHL20(2)                     <---------ANAC58                  <---------AHL20(2)                       <---------ANAC58                  --------->AHL20(2)                       <---------ANAC46                <---------AHL20(2)                         <---------ANAC55(1)                --------->AHL20(2)                         <---------ANAC55(2)              <---------AHL20(2)                           --------->ANAC55(2)              --------->AHL20(2)                          <-------TEIL          <---------AHL20(2)                             --------->CCA1(2)          --------->AHL20(2) ---------->DOF2            --------->ARR14(2)        --------->AHL20(2)   ========================================bZIP_DOF        <---------AHL20(2)  <---------AHL20(2)          --------->ARR11(1)      --------->AHL20(2)<---------AHL20(2)              <---------ARR14(2)                       ---- -->ARR11(3)--------->AHL20(2)              <---------ANAC46       ----------->GT1             ------ ---ARR11(3)<---------AHL20(2)         --------->YAB1 ----------->ARR10                    ----------   ataaacatatatatatatatatatatatatataaagacatatcatcgtgtataagtaagatacgtgagtatgtaatatgtagagagaaatagagaaagaa  18030500        XXXXXXXXXXXXXXXXXXX>MIR157D     <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------bZIP60(1)   --------->bZIP60(1)   <---------YAB1   ----------->HVH21        <------ZmHOX2a(1) =bZIP_DOF              --------->TOE1(2)                                                        <--- =bZIP_DOF          <---------ZAT18                                 <----------DOF2             ----- ----->DAG2         --------->ZAT18       <---------ARR14(2)    <----------DOF2            <---------TOE1(3) ---->DOF2          <---------ZAT14       --------->ARR14(2)<---------CCA1(2)              <---------TOE2(3) >DOF2 XXXXXXXXXXXXXXXXXXXX>MIR157A-C <-------TEIL    <---------ARR11(3)<----------DOF2<----------DOF2   aggtgatgacagaagcatagagagcacataggaatagagatgcagatagtcttctagctcttctatctttctttctttttttatatcaactttgaggtta  18030600                                                                              --------->AtMYB61                                                                              ------->GAMYB                                                             <---------CCA1(2)<---------ALFIN1                                                         <XXXXXXXXXXXXXXXXXXXMIR157D                                                         <XXXXXXXXXXXXXXXXXXXMIR156G                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         <XXXXXXXXXXXXXXXXXXXMIR156H                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         <XXXXXXXXXXXXXXXXXXXXMIR157A-C                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <XXXXXXXXXXXXXXXXXXXMIR156A-F                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <---------ZAT14       *TSS                                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       --------->ZAT14       --------->MYB46(3)                                                       <---------ZAT18      -------->P                                                       --------->ZAT18    --------->MYB46(3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                  ------>ZmHOX2a(1)      --------->At4g35610                        <---------ARR14(2)       --------->TOE2(3)       <---------At4g35610                        --------->ARR14(2)       --------->TOE1(3)   <-----------HVH21 ------TOE2(3)         <---------CCA1(2)<---------AtLEC2<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46 ----->DOF2  --------->YAB1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC46 --------->MYB46(3)   aagtatgaaatacaattagaaacacatatctgtgtctgttttgcatagcatccttagtgctctctatcttctgtcagcaaccacactatcaccctccact  18030700                                                                   ----------->HVH21                                                                  <------NtERF2                                                                  --------->At5g28300                                                                 ----------->GT1                                                                 <---------MYB46(3)                                                 <-----------TBP<---------DEAR3(1)                                               --------------->AGL15                              <--                          --------->AHL20(2)   <---------------AGL15                            <----              <---------LBD16                 <-----------------AGL3                            <----           <---------ANAC58            <---------ARR14(2)      --------->ZAT18 ----------->GT1  <----           <---------ANAC58<---------AHL20(2) ----------------->AGL3    ----------->GT1      --------   <-------TEIL<---------ANAC46       <------ZmHOX2a(1)        <---------ABI4(1)         ---------->DOF2   atacatacagcattcttgcggtttgatatataatatgtgaggatagagactatatatagagagagggcggtgaagagtaaatggtgtaatggaaagtggt  18030800                          ------->MYC3                       ---------->DOF2                         --------->O2                        --------->MYB52(1) -------ANAC46 --------->CCA1(2)                         <---------------AGL15 <-----------HVH21 -----ANAC46  --------->ARR11(1)                         --------------->AGL15--------->ANAC46 -----ANAC58  <---------ARR11(3)                        --------->MYB46(3)    --------->ANAC58 -----ANAC58----------->ARR10        ---------->DOF2    <-----------------AG  --------->bZIP60(2) ->ALFIN1<------ZmHOX2a(1)<-------MYC3                  <-----------------AGL2--------->ANAC58   gtgtatatataggaaagatttgagaccacgtttctacttaaaaggaatgaaatcgataaccactaaaggaatgacataccaagtcactgactatttcttc  18030900                                                                                  ------->GAMYB                                                                                 <---------MYB55(2)                                                    <---------SPL7               --------->MYB46(3)                                                   <---------ANAC58            ----------->RAV1(1)                                                   --------->ANAC58          --------->MYB46(3)                                                   --------->ANAC55(2)       <---------MYB59                                                   --------->ANAC58         --------->ANAC46                                                   <---------ANAC58         --------->ANAC58            --------->ANAC46       --------->HSFB2a(2)           --------->YAB1------>MYB46(1) ------            --------->ANAC58       <---------HSFB2a(2)------->TEIL  <-----------HVH21 --------->TOE1(3)            --------->ANAC58------->GAMYB         --------------->AtSPL8    --------->ANAC58  -------          <---------ALFIN1 <---------ALFIN1       <-------TEIL   <---------ICU4------>MYB83  --------        ------>ZmHOX2a(1) --------->ZAT14         --------------->AtSPL3   -------->P --------->TOE2(3)   <----------DOF2      --------->ANAC46          ------->TEIL  <---------ATHB51 <---------MYB52(2) ------->TEIL         --------->ANAC46    >>>>>>>>>>>>>>>>>LFY  <---------ATHB12 <---------MYB111(2)   atgtactttcctccacacaaaaatacacaacacacttcgagaggtaccaatgtacgtaccatatcaataatgtcacttacccaacaaaccctaaaaaaag  18031000                     <---------------AtSPL8                     <---------------AtSPL3                  --------->ARR14(2)                  <---------ARR14(2)               <---------------AGL15               --------------->AGL15                     <---------ICU4              <-----------------AGL2                  --------->YAB1              <-----------------AGL3      --------->At5g28300             --------->At4g35610         ----------->GT1 --------->YAB1 ----->GT1   <---------At4g35610       <---------At5g28300                                   -------- -->DAG2   <---------WRKY12        <----------DOF2   <---------YAB1                        <------ZmHOX2a(1) -->DOF2 <-----------HVH21    ---------->DOF2      --------->YAB1                      --------->ICU4   tttatatgaactgtcaactgtatatggtactgaaaagcttttacggtgaatatttataatcatgttcagtatttctaatctcttaagtcattaggaggta  18031100                                --------->ANAC55(2)                                <---------ANAC55(2)                                <---------ANAC58                                                   --                        <---------AHL20(2)                                                         <-                       <---------AHL20(2)                                                          <-                       --------->AHL20(1)                                                          --                       --------->AHL20(2)                                                         ---                       <---------AHL20(1)                            <---------DAG2           -------                      --------->YAB1        --------->ICU4           <----------DOF2     <---------ATHB12                   <---------AHL20(2)  ----------->GT1            <---------ALFIN1      ------>MYB46(1)                  --------->AHL20(2) <---------ANAC46          --------->ANAC46         ------>MYB83           --------->ZAT14      --------->ANAC46            <---------ZAT18            --------->WOX13(1) --->GT1   <---------ZAT18      <---------ANAC58            --------->ZAT14   ------>ZmHOX2a(2)   <--   aaaagtttttctttgcactatttaatataatcttacgtagcatgtaatatttgtgaatacattgcacaacacttttttgatcccactaccaatctataaa  18031200  Previous    Next  AGI:  At1g48742.1    Description:  MIR157D; miRNA Range:  from: 18030506    to: 18030677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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