Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <-----------HVH21                                                              --------->GLK1(2)  ---------->DOF2           <---------AHL20(2)                  ---------->ID1<----------DOF2 ------>ANAC58              <-----------GT1          ------>ZmHOX2a(2)        <---------DAG2 ------>ANAC46           <---------ARR14(2)      ------>ZmHOX2a(1)         <---------ALFIN1 ------>ANAC58           --------->ARR14(2)    ----------->RAV1(2)        --------->ZAT18        ---- ->ARR11(3)        <---------ALFIN1            <---------At4g35610        <---------ZAT18    --------   aggccaaagtcgtcaagtacaacaccgtatttactcgtgttgtctggtctcctgatcgtgaagtttgtctcattagcccactttctgaaattctctacct  18016100                                                                                        -------------                                                                                        --------->ZAT6          --------->At4g35610                         <---------At4g35610              --------------          <---------At4g35610                    --------->ANAC46                      -------------- --------->WOX13(1)     ---------->DOF2       --------->ZAT18                    <---------YAB1 ------->GT1     ------------------------>ANAC81 --------->ANAC58       --------->ATHB12<------------ >P      ----------->RAV1(1)      ---------->DOF2--------->ANAC58      <---------YAB1<-----------GT1   ggttaatcaaacagcagaaaatgaacaaaagtaaaccaaagaggtaagagcacggcagataataagtggcaagatgatgggttattgttacctctaatag  18016200                                                                                  ------>ZmHOX2a(1)                                                       <-------TEIL          <----------DOF2                                                 --------->MYB52(1)    ----------->HVH21 -->AGL15                                       <---------ARR14(2)   ----------->RAV1(2) --->AGL3                       <----------ID1  --------->ARR14(2) <---------ANAC55(2)             -- --->AGL2     <-----------RAV1(2)           <-----------RAV1(2)    --------->ANAC55(2)       <------- ---AGL15--------->ZAT14      ---------->DOF2  <------ZmHOX2a(1)  <-------TEIL    ===================   caatttctcagagaagtcaggctgaaacattttaaagacaaaaacaccaggaaacggttcagaaatgatacgtctgaagctttcctctgtgttttcgctg  18016300                                                                      --------->ANAC58         <---------ARR14(2)                                           --------->ANAC58        <---------SPL7                                               <---------------AGL15       --------->LBD16                                             <------NtERF2      --------->HSFB2a(2)                                     --------->ALFIN1      <---------HSFB2a(2)                                    ------->MYC3      <---------ANAC58                                       <-------MYC3      <---------ANAC58                                      <---------O2      --------->ANAC55(2)                                   ========================================bZIP_DOF     <---------LBD16                                        --------->TGA1a      <---------ICU4  <----------DOF2 --------->ANAC58                          <---------TGA1a ----------->GT1 ---->ZmHOX2a(2)  --------->ANAC58                          --------->O2 ---------->DOF2 ---------->DOF2 --At4g35610--------->TOE1(2)                <-----------GT1========================================= =====HOX2a_HOX2a ----------->GT1   <------ZmHOX2a(2)       ========================bZIP_DOF --------   atcgccttgcggaacgagggaagcaaaaacaatttgggatcaagtttatacaaccccttgaaacgtggctgcaagaaaaggaaacattgcataaagaaag  18016400                                    <---------ICU4                                    --------->ATHB12                           <---------LBD16                              <---------At4g35610                             ----------->RAV1(2)                              --------->At4g35610                        <---------MYB52(1)               --------->ANAC58    <---------YAB1                     <------NtERF2               --------->ANAC58    --------->ICU4                    <---------RAP2.3(1)     --------->ANAC58         ----------->RAV1(2)                    ------>NtERF2     --------->ANAC58       <---------ALFIN1                    <---------ANAC58   ---------->DOF2         ------>ZmHOX2a(1)                    <---------ANAC58 ===bZIP_DOF<-----------------------TaNAC69(2)                --------->ARR11(3) -->DOF2---------->DOF2   <---------ALFIN1             <---------ANAC46<---------ANAC46 --------->AHL20(2)   tctaagaaagcaaagacgagcaaaggctcctcacctgataattggatattatctcttgcctataggtcttgcgccgtttagcctggaacattatatacac  18016500                                                                                            <--------                                                                                            <------MYB83                                                                                            ---------                                                                                            <------MYB46(1)                                                                                           --------->MYB111(2)                                                   --------->ANAC58                        --------->MYB46(2)                                       *TSS   --------->ZAT18                    <---------ANAC58                                  <---------ARR14(2)           ---------->DOF2   <---------ANAC55(2)                                  <---------GLK1(2)--------->ANAC58------------>CBF      <---------MYB52(1)                <-----------RAV1(1)--------->GLK1(2)         --------->ARR11(3)  <---------ANAC58             --------->GLK1(2)    --------->ARR14(2)     ---------->DOF2         --------->ANAC55(2)   atgaactattctgagaaactgtgggtttaaacatcagattcttatgtgttcacaagaaaaaaagataaagacaattctctgattcgtatcagtttggtga  18016600 <---------ANAC58                        --------->ANAC58 <---------ANAC55(2)                     --------->ANAC58 <---------ANAC46                    --------->ANAC58              <----------ID1 --------->ANAC55(2)        --------->ARR11(3)                --------->ATHB12 <---------ANAC58         --------->ANAC58                   <---------YAB1 ----------->GT1          --------->ANAC58              --------->CCA1(2)                 ----------- -ANAC46        --------->ZAT6       --------->ANAC58  --------->ARR14(2)                <---------TOE2(3) -->GT1      --------->YAB1 <---------ARR11(3)         <---------ARR14(2)      --------->MYB52(1)   atttcgtaatttcaagtatcactatcgcaagaacttgagaagcaagtcaatttcacagatatgttgatagggccaaaaaaaaaacagaattagggtaaca  18016700                                                            <---------------AtSPL3                                                        --------->At5g28300                                                       --------->LBD16                                                      <---------LBD16                                                      <---------ANAC46                                                     <---------LBD16                                              --------->KAN4(2)                                             --------->HSFB2a(1)        ---------->DOF2                                             <---------KAN4(1)        --------->LBD16                --------->YAB1               <---------HSFC1(2)      <---------HSFB2a(2)    --------->ANAC58                         --------->KAN4(1)       --------->ANAC46    --------->ANAC58                         <---------HSFB2a(1)     --------->HSFB2a(2)     --------  --------->MYB52(1)                         --------->HSFC1(2)     <---------LBD16     ------->TEIL >GT1 ---------->DOF2    ---------->DOF2    <---------KAN4(2)   ------->TEIL    ----------->HVH21   aaaaaaacgaaagaaaaatcagaagttgaaagagccagtacttgggaacattcttcgcgggaaatgtacttccgcaaagtgtctgacatgaatttggcct  18016800                                                                                            <--------                                                                                          <---------ICU4                                                                                         --------->ICU4                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                          <---------ATHB12--------->YAB1                                                                        --------->WOX13(1)-------->HAHB4                                                                      <------ZmHOX2a(2)  <---------ATHB51                        <---------ANAC58                       -------->HAHB4         --------->AHL20(1)                        <---------ANAC58                       -------->ATHB1         <---------AHL20(1)             --------->TGA1a                                   <---------AHL20(2)  <--------HAHB4             <---------O2                                      --------->ATHB51    <--------ATHB1             ======================MYC_MYB                     <---------ICU4      --------->ATHB51             --------->O2                                      --------->ATHB12    --------->YAB1             <---------TGA1a                                  <---------YAB1       <---------ICU4             <---------ANAC46                                 --------->ICU4      <---------ATHB12            <------NtERF2        ----------->GT1              <---------ATHB51    --------->ICU4<----           ------>NtERF2<---------ANAC46                   --------->AHL20(2)     <---------ATHB51 -->ID1   --------->ANAC46 <-------GAMYB                   <---------AHL20(2)     --------->AHL20(2)<   tctcttctctctgcgccgtgagcattgcctgttgaaagttaaacttgattttgaatcaagtttaattattggatcaattatccaataattaattatggtc  18016900                                                                                                    -                                                                                             <xxxxxxx                                                                                             --------                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <---------ALFIN1-                                                                                   <xxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 <---------ALFIN1   <                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                           xxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                          --------->YAB1------>ZmHOX2a(1)                                                                          <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <---------HSFB2a(2)   <xxxxxxxxxxxxxxxxxxxxx                                                         --------->HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <---------HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxx                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx                                       <---------ALFIN1  --------->HSFB2a(2)  <xxxxxxxxxxxxxxxxxxxxxx                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <---------ICU4       --------->GLK1(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              --------->YAB1 --------->TOE2(3)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                             <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->YAB1<xxxxxxxxxxxxxxx                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            --------->ARR11(3)       <---------GLK1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     --------->HSFB2a(2)  <---------ALFIN1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxx                     <---------HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         >>>>>>>ZML2 <---------HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------HSFC1(1)<xxxxxxxxxxxxxx      <---------ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->HSFB2a(2) <xxxxxxxxxxxx    <xxxxxxxxxxxxxxxxsmallRNA(s)<---------YAB1   ---------->DOF2    <---------HSFB2a(2)--------->TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  --------->HSFC1(1)<xxxxxxxxxxxxxx   <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -YAB1--------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -----WRKY38(1)      --------->HSFC1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->At4g35610 <xxxx xxxxxxxxxxxxxxxxsmallRNA(i)<---------ARR11(3)------>ZmHOX2a(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   aaatccaagttctagagttttctctagaaatatcatcatttccacctccttaaaagattctagaaattttctagaatcatcttccacctccttaaacata  18017000  Previous    Next  AGI:  At1g48700.1    Description:  oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT5G43660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42214.1); similar to Os01g0502400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043135.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPr Range:  from: 18014703    to: 18016539    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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