Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR11(3)                               --------->ARR11(3)                            <---------AHL20(2)                            --------->AHL20(2)                          <---------YAB1                         --------->TOE2(3)                        --------->ATHB12                                                  <---------ANAC58                        <---------ICU4                                                    <---------ANAC58                       <---------ATHB12                                             <------ZmHOX2a(1)               --------->GLK1(1)                                                ---------->DOF2 -------GT1    <---------GLK1(1)                         <---------YAB1       <---------TOE2(3) ->YAB1  <----------DOF2--------->YAB1          --------->YAB1        --------->MYB52(1)  <---------ANAC46   acacgatttttctttggatttctaaatcattaaaatctatgagccaatatttataacttataatttgtgtagcaacggttaagaaaggacttacttggaa  18001200                                 --------->GLK1(2)                              ------>ZmHOX2a(1) ---                                 --------->ARR14(1)                           ----------->RAV1(2) ---                     --------->DAG2                            --------->AHL20(1)                 ---                   ---------->DOF2    --------------------->WRI1  <---------AHL20(2)            <----            <-------TEIL--------->GLK1(1)  ------->TEIL        <---------AHL20(1)         --------->LBD16           --------->CCA1(2)    --------->ARR14(2)             --------->AHL20(2)        <---------ANAC58          <---------ARR14(2)    <---------GLK1(2)   --------->ZAT14     <-----------GT1  <---------ANAC58          --------->ARR14(2)    <---------ARR11(3)  <---------ZAT14  --------->ANAC55(2)<------------         <------ZmHOX2a(1)      <---------ARR14(2) --------->DOF5.7(2)  ------->TEIL <---------ARR14(2)   gtaatgagagaggatacagccaaaaggtatccaagattctctatgtacttatcgttcactggaaatattttatgtatccctcctgaagttcccgtgctac  18001300                                                         <---------AHL20(2)                                                        --------->ARR11(3)                                                        <---------AHL20(1)                                                        <---------ARR11(3)         --------->At4g35610                         --------->YAB1       <---------ALFIN1                           <---------ICU4     <-----------HVH21                            --------->YAB1    ------->GAMYB                                <---------YAB1    --------->AtMYB61                            --------->ICU4    --------->YAB1                             --------->YAB1   --------->MYB46(3)                          <---------ICU4 ------>ANAC58                                <---------ATHB12                --------->GLK1(2)------ ------>ANAC58                              --------->YAB1                    <---------ARR14(2) ------>ANAC46    --------->YAB1          <---------WOX13(1)                  ------->TEIL   <------- -----ALFIN1     <---------ATHB12       --------->ATHB12--------->AHL20(1)    --------->ARR14(2) -----------TaNAC69(2)             ------>ZmHOX2a(2)<---------YAB1------->TEIL<---------ARR11(1)   acacaaccatcacctccaaatcaaaactagtacttgatccattgattaatcataatgatatatttatgtacctttggacgaatcttgtaatggttccacc  18001400                                                            <---------At4g35610                                                            --------->At4g35610                                                       <---------YAB1     <---------HSFB2a(1)                                                     --------->ATHB12     --------->HSFB2a(1)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                     <---------ICU4      --------->SPL7                                <-------MYC3        --------->ICU4 --------->MYB52(1)                                <-------MYC2        <---------YAB1<---------ALFIN1                        --------->ANAC58          <---------bZIP60(1)    <-------TEIL                        --------->ANAC58          --------->bZIP60(1)  <---------MYB52(1)         ---                        --------->ANAC46         <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->HSFB2a(2)              --------->ZAT18   ------->MYC2   ----------->HVH21  --------->DEAR3(1)             <--- ----->RAV1(2)<---------ZAT18   ------->MYC3 <---------ANAC58     --------->AtMYB61          <------- --ALFIN1 --------->LBD16    <---------ALFIN1<---------ANAC58    --------->MYB46(3)    --------->MYB46(3)   tgaaatcacatccgagggctctccattcgcaacacgttcgatataaggcttgacatcattgtagctcaccaccggtacgttcttcttgaacaactcttta  18001500                                                      --------->ARR14(2)                                          <---------MYB52(1)                                         <----------DOF2                                        <---------ANAC58                                     <-------GAMYB                                        <---------ANAC46                                    ---------                                        <---------ANAC58    ------>ZmHOX2a(1)               <--------                          --------->ARR11(3)          <---------ARR14(2)                   <-------TEIL                          <---------ARR14(2)          <---------ARR11(3)                  <---------MYB52(1)                          <---------GLK1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------ANAC58                          <---------ARR11(3) <---------ANAC55(1)                        <---------ANAC58 ------>YAB1              --------->ARR14(2) <---------ANAC46                       <----------DOF2 ------YAB1--------->HSFB2a(2)         <------NtERF2  <-----------ARR10            <---------ANAC58 ---DOF2   <---------HSFB2a(2)    <-----------RAV1(1) --------->ARR11(3)           <---------ANAC58   tcagagcttccatcgagaaaacgtttgagatactctgtgttggcgttaagtgtgagtatctccttcaatacatcatcttgtatttgctttgcgttcgttg  18001600                                                                             ------->TEIL                  --------->At4g35610                                    <---------TOE2(3)                  <---------At4g35610                                <----------DOF2  --------->ARR11(3)                                             <---------ZAT18  <---------ARR11(3) <---------WRKY38(1)                         --------->ZAT14 >MYB52(2)--------->ARR14(2)             <------MYB46(1)         <---------ZAT14 -MYB46(3)<---------ARR14(2)             <------MYB83            --------->ZAT18           <---------AHL20(2)   ttaagacctccaaatccttgagctcaacgcttaaactcatatttggttttgttctctagttctctagttcactttaatgtatatgttttttttttaatct  18001700                                                                                                  ---                                                                           --------->AHL20(2)     ---                                                                           <---------AHL20(2)     ---                                                                          --------->AHL20(2)     ----                                                                    ------>MYB46(1)              <---                                                                    ------>MYB83             --------                                                                  <---------MYB59            <------ZmHOX2a(2)         <----------DOF2             <---------AHL20(2)        <---------PCF2    --------->ATHB12<---  ---------->DOF2 <-----------TBP--------->ICU4               <----------ID1    <---------YAB1 ------   ctagtaaagggcttttagcgatatatagcactgtaagaattaatgtctagacaaaattcaaaatgggaccaaactatttattttgatttgtatagatcaa  18001800                                                              <---------YAB1                                                            --------->YAB1                       ----                                                            <--------ATHB1                      -----        --------->ANAC46                                    <---------ICU4               --------->DEAR3(2) ------>ATHB51                                              <---------AHL20(1)         --------->MYB52(1) ----->ATHB1                                                <---------AHL20(2)         ------>MYB46(1) ------>AHL20(2)              <---------ARR14(2)            --------->AHL20(2)       <---------MYB59 ----->ICU4                  --------->WOX13(1)            <---------ATHB51          --------->AtMYB61 ------ATHB51              ------------>CBF                --------->ICU4  ----------->GT1 ---------- ---->CBF              --------->ALFIN1             ---------->DOF2        <------MYB46(1)<----------ID1 ------ATHB12          <---------ANAC58        <---------------AGL15       <------MYB83------>MYB83 --->WOX13(1)          <---------ANAC58  --------->ZAT6  --------->YAB1   --------->MYB59--------->MYB46(3)   ttattcactcacagaacttagaaatgtgtgccaatccattcgaacactacctctcaaagtaataatttttgtttgtttggttaaaaaccaaaccgacaaa  18001900        <---------WOX13(1)        <--------P                                                            --------->TOE2(3)       <-------GAMYB                 --------->AHL20(1)                       --------->TOE1(3)      <---------MYB46(3)             <---------AHL20(1)        <---------ANAC46     <---------YAB1                <---------AHL20(1)          <---------ANAC58  --------->ATHB51     <---------AtMYB61             <---------AHL20(2)          <---------ANAC58  <---------ICU4 ----->DAG2                       --------->YAB1  ---------->DOF2     ----------->GT1<-----------GT1 ----->DOF2             <---------CCA1(2)       <---------TOE2(3)  <-----------RAV1(1)   ------>ZmHOX2a(1) ->RAV1(1)            --------->AHL20(2)<---------AHL20(2)<-----------RAV1(1) --------->YAB1      <--   aagtgtgatggttgatttttaaaattatatcccctataatatttttttttaagaaagacaatgttgcttatgtggcaaaaccataattttcctcatctat  18002000                                                    <---------ZAT14                                                    --------->ZAT14                                           --------->YAB1            <---------AHL20(2)                                          <---------AHL20(2)       <---------YAB1               <-----------GT1  <---------YAB1--------->YAB1      <---------AHL20(2)        <-----------GT1  <----------DOF2  --------->AHL20(2)    <---------YAB1         --------->AHL20(2) -------AHL20(2)       <---------YAB1   <----------DOF2 --------->ICU4               ----------->GT1   tttttttttttttcaatttacatttatctttgttatcaaacactttaattatactgtagttattctattattttaaaatcaataaccaagttaatacatt  18002100  Previous    Next  AGI:  At1g48660.1    Description:  auxin-responsive GH3 family protein. similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48670.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G51470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68714.1); contains InterPro domain GH3 auxin-responsive promoter (InterPro:IPR004993) Range:  from: 17999616    to: 18001640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version