Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->At4g35610              <---------YAB1    <-------TEIL                           <---------At4g35610         --------->YAB1<---------------------WRI1                      --------->At4g35610  <---------ANAC55(2) --------->ANAC46                         --------->At5g28300--------->ANAC46  --------->ANAC55(2) --------->ANAC58                        ----------->GT1   <---------ALFIN1 >ANAC46<-------TEIL  --------->ANAC58                    <---------ARR14(2)   --------->ZAT14   catcacttgattcatagtcattgtaagcaatacgtccatagccagagttttgcctctgaaaatatggtaaattagctgctctccactctattccaagagt  17998600                                                                        ----------->HVH21                                                                       <---------MYB111(1)                                                                      <---------At4g35610                                                                      --------->ANAC46                                                                      --------->O2                                                                      --------->ZAT2                                                                      --------->At4g35610                                                                      ----------->RAV1(2)                                                                 ------>MYB83                                           <---------WRKY18(1)   --------->ARR14(2)                                     <---------ARR11(3)          ------>MYB46(1)                               --------->ANAC58          --------->ANAC55(2)                   --------->At4g35610    --------->WRKY12      --------->WOX13(1)          ---------                   <---------At4g35610    --------->WRKY38(1) --------->MYB46(3)            <--------                   --------->ZAT2  --------->ANAC58      <---------ANAC55(2)         --------->ICU4                   <---------ZAT2  --------->ANAC58      --------->ANAC46            <---------ATHB12                 <-------PIF5  --------->ANAC46          <---------ANAC58       ------>NtERF2       -        --------->YAB1  <----------DOF2   ----------->HVH21 <---------ARR14(2)  --------->LBD16     <  >>>>>>>>>TBF1  ------->PIF5  --------->ANAC58          <---------ANAC58     <---------LBD16 <------   cgaagaagaagcatcaccacgagctgctttcacacacaagacccttgacctctgagaatgcgtaaccaatccacctgacctccggcaatgaagagacctt  17998700                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                    --------->ATERF1(1)                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                  --------->DEAR3(1)                                                                                  ----------->HVH21                                                                               --------->At1g77200                                                                               --------->DREB2C(2)                                                                               ----------->HVH21                                                                               --------->DEAR3(1)                                                                              --------->DEAR3(2)                                                                            <---------ALFIN1 <------MYB46(1)                                                                           <---------ABI4(2)---------                                                                           <---------At4g35610                                        <---------ZAT2                     --------->At4g35610         <------MYB83                   --------->At4g35610                --------->ZAT2 <---------MYB52(1)      <------ZmHOX2a(1)                 <---------At4g35610                <---------ZAT2<-----------HVH21 >ARR11(3)<---------ARR11(3)            --------->ZAT2                     <------NtERF2 <----------DOF2 -ARR11(3)--------->ARR11(3)           ------->TEIL                        --------->ATERF1(1) -------->ZAT14                   --------->At4g35610                     <---------ATERF1(1)<------MYB83 ---------ZAT14  --------->MYB46(3)  ---------->DOF2  <---------YAB1    <------NtERF2<---------DEAR3(1) ---MYB59<------MYB46(1)        <------NtERF2      --------->ICU4       --------->ATERF1(1)<---------MYB55(1)   actacagaggaaggtctcaacaacaatttagggctccgatgaagctggatggaattatgttgaataaacatggaggcagcaccgacgacggcgttaggtc  17998800                                                                                       ---------->DOF2                                                                                      --------->AtMYB61                                                                              <----------DOF2                                                                             --------->HSFB2a(1)                                      <-----------GT1                        <---------HSFC1(2)                                   <---------AHL20(2)                        <---------HSFB2a(1)       <---------LBD16   --------->DAG2              --------->At4g35610     --------->HSFC1(2) <---- >MYB59------>ZmHOX2a(1)---------->DOF2  --------->HSFB2a(2)      ---------->DOF2 <---------ETT(1) <-   tgatatgtcctcggaaaattgcagagtaaagttgcatttttttcgagattagaacatctgaagatgctaaaagagtcgaactttccgaccaaagacccgt  17998900                                                                                       <---------ALFIN1                                                                                       --------->MYB46(3)                                                                                    <------NtERF2                                                                                <------MYB83                                                                                <------MYB46(1)                                                                               <---------AtMYB61                                                                               <---------TOE1(2)                                                                               <---------DEAR3(1)                                 ----------->GT1           <---------AtMYB61<---------ANAC46        ---------->ID1   <---------ANAC46                --------->ALFIN1   <---------ANAC58  *TSS  -   <----------DOF2     --------->ZAT14                --------->DAG2        <---------ANAC58 ======== -----MYB52(1)         <---------ZAT14        <---------AtMYB61            <------NtERF2<---------ALFIN1 ---------DOF2      <---------ANAC46          <---------YAB1             <---------DEAR3(1)  <-------   tctttcttttgtctctgttcttctgtgaagtagaacagaaacaatgttatggtggaaaggtgaggtttttgtgaggctgcgtaggtgccacaaccctttc  17999000            <---------ANAC46         ----------->HVH21         <---------TGA1a         ===================================================bZIP_DOF         --------->O2         --------->ANAC46                                                                          <-         <---------O2                                                                              --      ----------------->AGL1                                          <------------CBF             <-    ------>NtERF2                                                    --------->ATHB51          ------   <---------RAP2.6(2)                                               -------->ATHB1        <------MYB46(1)  --------->RAP2.6(3)                               <---------ANAC58 --------->ATHB12      <------MYB83 --------->MYB52(1)                    <------------CBF           <---------ZAT6     <---------AHL20(2) ---------->HVH21                     --------->ATHB12      <------NtERF2        <---------DAG2<----- ==================bZIP_DOF          <---------YAB1 <---------ANAC58<---------YAB1   --------->AHL20(2) ---DOF2 --------->TGA1a --------->At4g35610     <----------DOF2----------->GT1  <----------DOF2   --   aaatgacggccacgacggggaagaagacgctgagagtttttcattgggcttctttcttgggccgaatagtattattgggctaactttttaatttggttta  17999100             ----------->HVH21           <---------At4g35610           --------->At4g35610                                                            <---------ICU4 --------ZAT14                                                                            <--------HAHB4 ------->ZAT18                                                                         --------->WOX13(1) --------ZAT18                                        --------->GLK1(2)            ----------->GT1<-- --------->AtSPL8                                    <---------GLK1(2)     --------->YAB1<---------ATHB12 ----------AtSPL8            <-------TEIL       <---------AHL20(2)       --------->GLK1(2)--------->ATHB12 ------->ZAT14 ---------->DOF2        <---------MYB52(1)         ---------->DOF2   <---------TOE2(3)   gtacacaaatttcatctgaaagtttgtcagtttcatgtccattagtctatttatagattctatctacaaaagtagaatcggaattaagttaatcatttgg  17999200                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                         ------>ZmHOX2a(1)                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     <---------GLK1(2)                                                                                     --------->ARR14(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)                                                                                     --------->ARR14(3)                             <---------ANAC58                                        <---------ARR14(3)                             <---------ANAC58            =====================================HOX2a_HOX2a             <---------YAB1  <---------AtLEC2            <------ZmHOX2a(1)         ----------->ARR10    <---------MYB52(2)       <---------ANAC46            ====================================HOX2a_HOX2a  --------->ZAT6    --------->At5g28300       --------->CCA1(2)                -------->P<----------DOF2 -------WOX13(1)   ----------->GT1           --------->ARR11(3)       --------->YAB1 <---------ARR14(2)   attgacactaacattttgatacagtaaaattgcatgttcttagattagatatagcattaggaaacaaaacaaaaataaaactaccaagatcctttctttg  17999300                                                                         <---------ARR11(3) -------ANAC46               --------->YAB1                   <---------ANAC55(2) -----WRKY18(1)   <---------YAB1                              --------->ANAC55(2) ----------->GT1 --->WRKY12    <---------------AGL15    --------->ANAC46    <-----------GT1       --------->YAB1 --->WRKY38(1) --------------->AGL15--------->YAB1     --------->YAB1    --------->ARR11(3)        -- ----->HVH21   <----------DOF2 <---------YAB1       --------->YAB1   ---------->DOF2           <----- ---DOF2    <-----------GT1 <---------YAB1       --------->YAB1  --------->MYB52(1)    --------->ICU4   acctgtagaaaaataaactttttatagcatattataaatcacaagggacaatattgatcatattacataacgaaagaacttcaattgtaaaaatttagag  17999400                                     --------->CCA1(2)                                    --------->ARR14(2)                                    <---------ARR11(3)                                <---------AtLEC2                            --------->CCA1(2)                           --------->ARR14(2)                           <---------ARR11(3)                           --------->ARR11(1) --------->ANAC58          <---------GLK1(2) --------->ANAC58          --------->ARR11(3)                                        <---------YAB1 -------->DOF2           ----------->ARR10                             ----------->GT1    <---------- -----ID1    --------->YAB1<---------ARR14(2)                --------->ALFIN1  ----------->GT1   acaaagccatttctatcatcaagtacaaagatttgcaagatttgataagaaaatggactaattgtggtgctagttgtgaaaatgtttataaataacatta  17999500  Previous    Next  AGI:  At1g48650.1    Description:  helicase domain-containing protein. similar to ATP binding / helicase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G04895.1); similar to helicase domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G35920.1); similar to ATP binding / helicase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G01130.1); similar to hypothetical protein OsJ_000149 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10324.1); similar to putative DEAD/H box polypeptide 36 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52491.1); similar to hypothetical protein OsI_000141 [Oryza sativa (indica cultivar-group)] (GB:EAY72294.1); contains InterP Range:  from: 17992826    to: 17998994    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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