Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ----------->RAV1(2)                                                                             ------>ZmHOX2a(2)                                                                            --------->CCA1(2)                                                   --------->MYB52(1)       <------ZmHOX2a(2)                                                  <---------ARR14(2)        --------->At4g35610                                                --------->ANAC58            <---------At4g35610                                                --------->ANAC58           --------->AGP1                                            --------->AtLEC2               <---------ARR11(3)                                            ------>MYB46(1)                --------->ARR11(3)                                            --------->ANAC58               --------->ARR14(3)                                   --------->ZAT2 --------->ARR14(2)       --------->ARR14(2)                                   <---------ZAT2--------->MYB46(3)  <---------YAB1                                   <---------At4g35610               --------->At4g35610                                   --------->At4g35610  --------->ARR14(2) <---------ARR14(2)                           <---------YAB1   --------->ANAC46       --------->YAB1         <---------- -----ARR11(3)          ------->TEIL        --------->ANAC58      <---------ATHB12   ----------->GT1 ---->ARR11(3)       <---------ATHB12       ------>MYB83<---------ARR14(2)<---------GLK1(1)         < ->DOF2              <---------YAB1----------->RAV1(2) <---------MYB52(1) --------->GLK1(1)    <-----   tcttaccacagattgagaagacaatgaatgtgattacagctgaaccaagcaagaaccggttcttacaaatcatcagagatctgcctgaagttaaactctt  17989600                        ------>NtERF2                        <---------RAP2.6(3)                        --------->LBD16            --------->ANAC58            --------->ANAC46                                                         <----------DOF2 -GT1<----------DOF2   --------->RAP2.6(2)  ---------->ID1                       <----------DOF2 -----------GT1       <---------LBD16     <---------MYB46(3)  ---------->DOF2   <---------ANAC58 -----DOF2  --------->ANAC58       <----------DOF2          --------->LBD16     <---------ANAC58   <-   ttttactcttttatacgctaatatgccgcaatagcaacttttgtttgttctcttagaaattccccaaagtgttttgctatttgctttctttgtagggggg  17989700                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                        <---------HSFB2a(1)                        --------->HSFB2a(1)                                --------->ATHB12         ---------->DOF2<---------HSFC1(2)                                <---------YAB1     <---------ANAC58   --------->HSFC1(2)        ---------->DOF2<---------AHL20(2)     <---------ANAC58  <---------KAN4(2)   <---------HSFB2a(2)   --------->AHL20(2) ---------DOF2       <------ZmHOX2a(1)     --------->HSFB2a(2)  --------->AHL20(2)---------->DOF2  <-   tcttttagcttgaaagaaatgcaggaattttcgtgttttgagcttgtagaaccaaagttgatttcatttatttgttttgattagaaaagaagagcatttg  17989800                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                               <---------ANAC58  <---                                                                               <---------ANAC58  <---                                                                               --------->MYB52(2)<---                                                                           <---------ANAC58   -------                                                                      <---------ALFIN1        -------                                                                     <---------ZAT14      --------->ANAC58                                                                <------ZmHOX2a(2)         --------->ANAC46                                                               --------->ARR14(2)     --------->AtLEC2                    --------->ATHB12 --------->ANAC58        --------->ANAC46 <-------TEIL--------->ANAC58                   <---------YAB1    --------->ANAC58     --------->ZAT18  <---------ANAC58   -------      <---------ZAT18              ---------->DOF2<---------AHL20(2) --------->ZAT14<---------ANAC46-     <------ZmHOX2a(1)  ----------->GT1         <-----------TBP<---------ARR14(2)   <---------ANAC58- --------AHL20(2)<----------DOF2<---------ANAC55(2)---------->DOF2 --------->ANAC46 <---------ANAC58-   tttaataggacacttggaactttgattagaaaataagtaaagcaacttgcatttaaagtgtccacgatccctccactgcgttcgtgccttgcacacaagt  17989900        <---------TOE2(3) ------->GAMYB ------->At4g35610 ------>MYB52(1)                                                   <---------AHL20(2) -------DOF5.7(2)                                             --------->LBD16 ------WRKY38(1)                                             --------->TOE2(3) ------WRKY12                                                --------->ANAC55(2) ------WRKY45                                                <---------ANAC55(2) -->ANAC46                                                   --------->ANAC46 -->ANAC58                                     --------->ARR11(3) --------->ICU4 -->ANAC58              <---------ATHB12       <---------ARR11(3) <---------YAB1--------->LBD16 -------->ANAC58    ------------>CBF ---------->DOF2   --------->ANAC46       <---------LBD16 -------->ANAC46<---------DAG2<---------At4g35610--------->AHL20(2)--------->AHL20(2)   ---------->DOF2 -------->ANAC58<----------DOF2  --------->At4g35610 <-----------GT1         --------->MYB52(1)   caacggaacaaaggttgacttttccaatctatagctgctacaagcgcaagattttatacacatccgtaattaatgagattaccggagaacaaaagtgtaa  17990000                                                         ------>NtERF2                                                         ----------->RAV1(1)                   <-----                                                        <---------ALFIN1                      -------                                                        --------->DEAR3(1)                   <-------                                                      --------->LBD16                   <------MYB46(1)                                                      ------>NtERF2                     <---------MYB46(3)                                                      <---------ATERF1(1)               <------MYB83                                                     --------->ANAC58                  <---------AtMYB61                                                     --------->ANAC58                  --------->MYB59                                                   ------>ZmHOX2a(1)                   <---------MYB46(3)                       ----------->GT1         --------->ARR14(2)                <---------LBD16                   --------->AHL20(2)          <---------ARR14(2)              --------->AtMYB61              --------->ETT(1)                --------->GLK1(1)               --------->MYB46(3)              <---------ANAC46                <---------GLK1(1)          <---------MYB52(1)  --------           <---------MYB46(3)      ----------->HVH21 --------->ANAC46   <-------GAMYB <--------P       <---------TOE1(2)         <---------At4g35610 --------->DEAR3(1)--------->MYB52(2)<-----------HVH21       <---------TOE2(2)         --------->At4g35610<---------LBD16   <-------TEIL --------->LBD16      <-----------RAV1(2) ------->TEIL  --------->At4g35610      ---------->DOF2--------->MYB52(1)   gagttatcgcaggttgtcggataaaatgtatattcagatgacagatggagttcctccgccaccagagcaaagttcgttagaccaccgggttggtcagatc  17990100        <---------ICU4        --------->YAB1 <----------DOF2 -ZmHOX2a(2)                                     --------->ZAT6 -->ARR11(3)                             <---------ANAC58               <---------YAB1 --At4g35610                             <---------ANAC58        <-----------------AGL3 ->At4g35610                         <----------DOF2         <<<<<<<<<MYB2            <---------WOX13(1)   accctttcattcattacccatttgtattaatctcatcggctttacttacgaagactagtcttggttttccatttttgattacacatagattgacgagctt  17990200                                                                                                    <                                                                                                    -                                                                             --------->O2        ----                                                                        <-----------GT1         -----                                                           <---------SPL7    <---------O2       <----                                               --------->ANAC58     <-------MYC3                -----                        <---------ANAC58       --------->ANAC58     ------->MYC3             <------MYB46(1)                    <---------WOX13(1)       --------->CCA1(2)     --------->ANAC46          <------MYB83                  --------->ATHB12          --------->ARR14(2)     --------->O2            <--------P                 <---------YAB1          --------->HSFB2a(2)  --------->ANAC58           <---------MYB46(3)             <------ZmHOX2a(2)<---------MYB52(1) --------->ANAC46<---------ALFIN1        --------->ATHB12      ---------->DOF2   <---------ANAC58 <---------HSFB2a(2)  --------->ANAC58 ----------->HVH21<----   gagagacagaaagagatcgatgattggcttccgataacttcatcgagaaacgcgaaatggtggtactccacgtttcacaacgtgactgccatggttggag  17990300      ------>ZmHOX2a(1)   <------NtERF2 <---------ANAC58                          --------->ANAC58 <---------ANAC46                          --------->ANAC58 <---------ANAC58                         --------->ZAT18 ------NtERF2                             <---------ZAT18 -------->ATERF1(1)                    <------MYB83                                    <---------ANAC58 ----->ATERF1(1)               <---------ZAT2        >>>>>>>>>ARR2           <-----------GT1 ---->ZAT2                    <---------ALFIN1      --------->ATHB12  <---------ARR11(3)         <--- -----At4g35610              <---------ALFIN1      <---------YAB1     --------->ARR11(3)         ---- ---->At4g35610       <---------AtLEC2 <------MYB46(1)<---------WOX13(1) <----------DOF2<----------DOF2 -----ZAT2      <----------DOF2--------->ZAT2    --------->YAB1 <---------ALFIN1       <---------ANAC58   ctggcgtccttggtctccctttcttcatggcccaactcggatggtacacaattttgattgttttcaacacattatcttttaacttgtttgcttttgcatt  17990400                                        <---------YAB1                                       <---------AHL20(2)                                       <---------AHL20(1)                                     <---------AHL20(2)                                  --------->AHL20(1)       <---------ICU4                               --------->CCA1(2)         <---------ARR11(1)      <---------TOE2(3)       <---------ARR11(3)         <-----------ARR10 ------AHL20(2)               --------->ARR11(3)         --------->ARR11(3)            ----------->GT1 ----->AHL20(2)  --------->ANAC46 <---------AHL20(1)    <---------CCA1(2)         ---------->DOF2   tatttgttaagttttgttcacagaagtaagaagatatatattatttttagttttcatcaaatctttgcaaattttgaacatacaaaaagatgtaatttga  17990500  Previous    Next  AGI:  At1g48635.1    Description:  PEX3/PEX3-2 (PEROXIN 3-2). similar to PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] (TAIR:AT3G18160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68158.1); contains InterPro domain Peroxin-3; (InterPro:IPR006966) Range:  from: 17987372    to: 17989784    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g48640.1    Description:  lysine and histidine specific transporter, putative. similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G40780.2); similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G40780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46653.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46673.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 17990026    to: 17992659    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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