Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <------NtERF2 ------>ANAC58                                                       ------>NtERF2 ------>ANAC58                                                       ----------->RAV1(1) -------ALFIN1                                                    <---------RAP2.3(1) ----ZAT18                                                 <---------TOE1(3) ----PCF2                                              --------->CCA1(2)                           -- --->ZAT18                           <-----------RAV1(2)   <---------TOE2(3)                   *TSS<- >ALFIN1 <----------DOF2------>ZmHOX2a(1)     <---------TOE2(3)  <---------ANAC46    ----------->GT1   acacattgtgcctttcaacacgagtccttcagccatggttcagggtttgaggtcgagatttagggtttcggcgacaaaaatgggagagggcaaaatggag  17987000                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                         <----------DOF2                                                                                       <------NtERF2<                                                                                      --------->ANAC58      <---------ARR14(2)       --------->ICU4                                         ----------->RAV1(1) ------->MYB52(1)<-----------TBP     <---------TOE2(3)   ------------>CBF             --------->ANAC58 --------DOF5.7(2)          <---------ZAT6 <----------DOF2                  --------->ATHB12---------   gtaacgagaaaccgagagtatttatagttagagataattagggttctttgttttcatttgtcaatagtttgggtctcttcatttgggccagcattaaggc  17987100                                                                                             --------                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC46           ------>MYB46(1)                                                      <---------GLK1(2)         --------->MYB46(3)             <---------ARR14(2)                   --------------->AGL15         <---------MYB59           --------->ATHB51                          <---------------AGL15      <-----------GT1              <------------ATHB5                       <-----------------AGL1 ------->LBD16                     --------->YAB1       <----------DOF2     ----------------->AGL1  - ----NtERF2------>MYB83            <---------ICU4    --------->ARR11(3)     <-----------------AG<---- ------LBD16                      <---------ATHB51   <---------ARR11(3)     <-----------------AGL2  - ---------MYB52(1)     <-----------RAV1(1)          <---------CCA1(2)       ----------------->AGL2  - ->DOF2 --------->ANAC46          --------->ICU4  --------->AHL20(2)        =========================   ccggtattctacccaacttggtttcatgttgggacaattatggaaccgagatttatatctttctgtttggaacgcttaaccagaattggtatagcttgtt  17987200                                                    <----------DOF2                                               <-----------GT1                                       <---------DAG2 --->GT1                        ----------->HVH21 <---------------AGL15 -------->ANAC58              --------->bZIP60(1) --------------->AGL15 -------GT1    ------->GAMYB  <---------bZIP60(1)<-----------------AGL1                            <- -------->ANAC46           ----------->HVH21 <-----------GT1                                      --- -------->ANAC58        <-------TEIL   <----------DOF2                    --------->ZAT6 <----------- =================================================================MADS_MADS            --------->ARR11(3)   acaagtcaatttgataaccacatgagtacatgacatgacaacttttttttctctcttttgggcaaaccccatgagaactctaccgagaagttattgtcaa  17987300                              <---------TOE2(3)                            --------->AHL20(2)                            --------->YAB1                         --------->WOX13(1)                       ------------>CBF                    <---------MYB46(3)                    <---------DEAR3(2)                    <------MYB83                    <------MYB46(1)      <-----------------AGL1         *TSS -----------CBF    <---------DEAR3(1)  --------->MYB52(1)        <------------CBF ------>DAG2      <---------------------WRI1                   <---------YAB1 -CBF         ---------->DOF2---------->DOF2                 <----------DOF2   aaattgaaatagactcaaaagtcggttcaattaaagtaaacaaaccgagtttggccatttcaacttttattgtaagaactaagaacacaacttcgactgt  17987400                                 --------->LBD16                                --------->HSFB2a(2)                                <---------ANAC46                            --------->GLK1(1)                <---------AHL20(2)       <---------CCA1(2)                   <---------AtLEC2       ---------->DOF2    --------->AHL20(2)     ------->GAMYB                 <-----------GT1<---------HSFB2a(2)         <---------AHL20(2)      --------->AtMYB61           <---------AHL20(2)  <---------LBD16              --------->AHL20(2)     --------->MYB46(3)         --------->CCA1(2)  <---------GLK1(1)            --------->ATHB12         -------->P        <---------ARR11(3)  <---------ARR14(2)         <---------WOX13(1) <------ZmHOX2a(2)        --        --------->ARR11(3)  --------->ARR14(2)       --------->ATHB12    <-----------HVH21<----------DOF2   ccctgtggaagatataattttacatgtccgaattccggagaagaaaaagatgaagtgattgattaaattgaaatcgatcacatcaaccatctctttctct  17987500                                            --------->GLK1(2)                                            <---------KAN4(2)                                            <---------ARR14(2)                                            --------->ARR14(2)                    <---------LBD16                                        --------->HSFB2a(2)            <---------ZAT2                                        <---------HSFB2a(2)            --------->At4g35610                           ------>MYB46(1) --------->GLK1(1)           <---------At4g35610                <----------DOF2  <---------ATHB12          --------->ANAC55(2)------->TEIL    ---------->DOF2        --------->MYB52(1) --------->YAB1           --------->ZAT2               - --------->RAV1(2)         ------>MYB83<---------LBD16     <---------ANAC46  <---------CCA1(2)<------   cgcctgcaaagttatctccttttcaaaccgaacgaatcaattcgggaatcttcatctttctacgtgttttctcagctatgtatctctgggttcgacttca  17987600                                <---------ANAC58                                <---------ANAC58                               <-------TEIL                              --------->ARR11(3)                             <------------------------ANAC81                            <------MYB46(1)                       <---------ANAC58                       <---------ANAC58            ------>MYB83  <---------MYB55(1)            ------>MYB46(1)--------->MYB59           --------->ANAC58--------->MYB52(2)           --------->ANAC58--------->MYB46(2)      <----------DOF2      <---------ANAC58           --------->ANAC46--------->MYB111(1) <----------DOF2          <---------ANAC46          --------->MYB46(3)XXXXXXXXXXXXXXXXXXXX>MIR837-5P   <---------ANAC58       --------->REM1(1) <---------MYB52(1)--------->REM1(1) <---------ANAC58                      <- --------->DOF2     <---------GLK1(1)<---------ZAT18   <---------YAB1   <---------ANAC58           <- ---ZAT14<---------At4g35610<------MYB83 <----------DOF2  <---------WOX13(1)                <--------   gtaaaagcttcaccagccatggatttcgttaggttcttgttcgcttcatctttctttgtaattgcttactgttttcgtgaaaattcgaaatttagtgttt  17987700                                                                             <---------YAB1 <--------                             <---------ICU4                           <---------TOE2(3)     <--------                        --------->ZAT14                 ----------->GT1      <---------AHL20(2) --------ANAC58         --------->ZAT18      <------ZmHOX2a(1)        <---------TOE1(3)   --------->ARR11(3) --------ANAC58         <---------ZAT18  ------>ZmHOX2a(1)      --------->DAG2            <---------ARR11(3) -ZAT6                  <---------ZAT14 --------->TOE2(3)      ---------->DOF2  <---------WOX13(1)   tgcgttctctatctctctctctctagcacactaattccaattccttaggaagggtttttggtgaataaagttagggtttttaattgattcaataccttgt  17987800                                                      <--------P                                                     <-------GAMYB                                                    <---------MYB46(3)                                                    <------MYB46(1)                                                 <---------At4g35610                                                 <---------ZAT2                                               <---------RAP2.3(3)                                               <---------RAP2.3(2)                                               <---------ANAC46                                               <---------DEAR3(1)                                               <---------RAP2.6(2)                                              --------->ATERF1(1)                                            ----------->TGA1                                     --------->ARR11(3)                                     <---------ARR11(3)     <---------HSFB2a(2)  --------->AHL20(1)                 <---------ARR14(3)  <---------ANAC46  <---------AHL20(1)                 --------->ARR14(3)<---------MYB46(3)   --------->ZAT6  --------->AHL20(2)                <------MYB83------>NtERF2             <-----------GT1  <---------AHL20(2) <------ZmHOX2a(1)      ----------->HVH21       <------MYB46(1) -ANAC58           <---------------------WRI1 --------->RAP2.6(3)   <------MYB83 -ANAC58    <----------DOF2         <------MYB46(1) <------MYB83  --------->ALFIN1   ggaataaattaggggtttttggaggaagcatagaaggaaggtcttggtgacggctggttgtttgggaagtgggtatttactctacaaactatacaattcc  17987900  Previous    Next  AGI:  At1g48630.1    Description:  guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative. similar to guanine nucleotide-binding family protein / activated protein kinase C receptor (RACK1) [Arabidopsis thaliana] (TAIR:AT3G18130.1); similar to Guanine nucleotide-binding protein subunit beta-like protein (GB:Q39336); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 17985441    to: 17986995    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g48635.1    Description:  PEX3/PEX3-2 (PEROXIN 3-2). similar to PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] (TAIR:AT3G18160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68158.1); contains InterPro domain Peroxin-3; (InterPro:IPR006966) Range:  from: 17987372    to: 17989784    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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