Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ============                                                                                         ---------->DOF2         <-------TEIL                                                                 <----------DOF2   ----------->RAV1(2)                                                                --------->TOE2(3) ------WRKY18(1)             --------->DEAR3(1)                                       --------->TOE1(3) ------>HVH21             ------->GAMYB                    --------->DAG2       --------->TOE2(3) ----WOX13(1)            --------->MYB46(3)       ------->GAMYB                 --------->TOE1(3) ---AtLEC2      <---------TOE2(3)    <---------ATHB12     ---------->DOF2<---------AHL20(2) ---ANAC58     <-----------GT1 --------->AtLEC2--------->MYB52(1)        --------->AHL20(2)        -- ---ANAC58--------->MYB52(2) <---------ANAC46<---------ATHB12      ----------->GT1    ===============   gacccatctggttcgtttaacgctgcaatcgccgtgcaaatcatctaatcaacgaaaaaaaaaagtgagtggaaattaaaaaccctaactttaaagtcaa  17979700                           --------->TGA2(2)                          <-----------TGA1                          --------->TOE2(3)                          <-----------HVH21                                                     <----                         --------->bZIP60(1)                                                    <----                         --------->ANAC58                                                       -----                         --------->ANAC46                                                      ------                         <---------bZIP60(1)                                                   <-----                         <---------TGA1a                                                  --------->LBD16                         --------->TGA1a                                                 <---------ANAC46                         <---------TGA2(1)                                              <---------At4g35610                         --------->ANAC55(2)                                            --------->At4g35610                         --------->ANAC58                                               <---------LBD16                         --------->O2                                                <---------At4g35610                         --------->TGA2(1)                                           --------->ZAT2                         <---------ANAC55(2)                                         <---------ZAT2 <                        --------->SPL7                                          <---------RAP2.6(2) <                    --------->At4g35610                                       --------->MYB52(2)-----          --------->At4g35610                                            --------->ARR11(3)   <------ZmHOX2a(1)          <---------At4g35610             --------->ALFIN1               <---------ARR11(3) ---------    --------->ICU4 --------->ARR11(3)   --------->ALFIN1         --------->ARR14(2)  --------->At4g35610 ==================================bZIP_DOF                      <---------ARR14(2) <-----------RAV1(1) --------->GT1     <---------ARR11(3)<------ZmHOX2a(1)          <------ZmHOX2a(1)  <---------RAP2.6(2) ==================================bZIP_DOF----------->GT1   <------ZmHOX2a(1)<-----------RAV1(1)   <   aatgtaagaatgagctaagaagagcttacgtcagagtaaggagggtgggaaatagatggatgaggaggaactggagatgtttgtggctgctgcggaggag  17979800                                          <---------SPL7                                          <---------PCF2                                          --------->ARR14(2)                                          <-----------HVH21                                          --------->TCP16(1)                                          <---------ARR14(2)                                          --------->TCP20                                         <------MYB83                                         <------MYB46(1)                                         <---------DEAR3(2)                                        --------->ABI4(2)                                      <------NtERF2                                      --------->ATERF1(1)                                      <-------GAMYB                                     --------->MYB55(2)                                     <---------DEAR3(2)                                     <---------MYB46(3)                                     <---------DEAR4(2)                                    --------->ALFIN1                                   <------NtERF2                                   <---------ABI4(1)                                   <---------------------WRI1                                  <---------RAP2.3(1)                                  <---------ERF1                                  <---------RRTF1(1)                                  ------>NtERF2                                 <---------DEAR3(1)                                 <---------O2                                 --------->O2                                 <---------RAP2.3(2)                                --------->ATERF1(1)                               <---------ATERF1(1)                              ----------->HVH21                              <------NtERF2                             ------>NtERF2--------->TCP15(1)                            <---------ANAC46                           --------->RAP2.3(1)                           <------NtERF2--------->MYB55(2)                           --------->ATERF1(1)                          <---------ATERF1(1)                          ------>NtERF2<---------MYB55(1)                          <---------RRTF1(1)                                            <---------MYB46(3)                          <---------RAP2.6(1)                                           <------MYB83                          <---------DEAR4(2)                                            <------MYB46(1)                          <---------ORA47(2)                                           <---------AtMYB61                          <---------RAP2.3(1)                                         <--------P                         <---------RAP2.3(3)                                        <-----------RAV1(1) <----------DOF2         <---------RRTF1(2)                                       <------MYB46(1) <---------WOX13(1)      <---------DREB2C(2)                                      <------MYB83 -----At4g35610          <---------RAP2.3(2)                <------MYB83         <---------MYB46(3) -----ZAT2               <---------RRTF1(3)                 <------MYB46(1)      <---------AtMYB61 ---->At4g35610          <---------ATERF1(2)  --------->At4g35610                --------->MYB111(1) --->ARR14(2)            <---------RAP2.6(2)  --------->LBD16 <---------ANAC46   --------->MYB111(2) ----ARR14(2)            <---------DEAR3(1) <-----------RAV1(2)                  --------->MYB55(2) ---------ANAC46         --------->ATERF1(2)--------->SPL7  <---------MYB46(3)   --------->MYB46(2) ---------ANAC58        <---------LBD16--------->ALFIN1     --------->MYB55(2)   <---------DEAR3(1) ---->ZAT2          <---------ANAC58<---------DEAR3(1)     --------->ALFIN1     <---------MYB55(1) >ALFIN1      ------->TEIL<---------ERF1<---------MYB46(3) <---------AtMYB61    <--------P ---------ANAC58    <---------ANAC58<---------DREB2C(2) --------->ALFIN1----------->HVH21   ---------   ctgcttgatagagatggatgttgtttggcggcgcgacggcggtgggtccggtgaagaaggggtggtttggagaggcgaaggggttggtgttggtgaaagg  17979900                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                           <---------ANAC58           <------ZmHOX2a(1)                                      --------->ATHB12        ===============HOX2a_HOX2a                                     <------ZmHOX2a(2)        ------>ZmHOX2a(2)                       <------ZmHOX2a(1)  <---------MYB46(3)  <-------TEIL                       =====================HOX2a_HOX2a      <------ZmHOX2a(2)                     --------->ALFIN1=============================HOX2a_HOX2a                    ========================HOX2a_HOX2a      ================HOX2a_HOX2a                    <------ZmHOX2a(1)<---------YAB1         <---------ARR14(2)                  --------->ALFIN1  <---------ARR11(3)      --------->ARR14(2)                 <------ZmHOX2a(1)  --------->ARR11(3)    <---------HSFB2a(1)           <---------At4g35610     ==================================HOX2a_HOX2a           --------->At4g35610     =================================HOX2a_HOX2a         --------->ZAT14           <------ZmHOX2a(1)      --------->HSFC1(2)         --------->ZAT18  ==================HOX2a_HOX2a   <---------HSFC1(2)           --------->AHL20(2) ---------->DOF2 ===========================HOX2a_HOX2a   --------->HSFB2a(1)      ----------->GT1  - ->DOF2  <---------ZAT14  <------ZmHOX2a(1)<---------ANAC58<------ZmHOX2a(1) <---------ZAT6         -   agggaaagatgtgaactgaggaggaggaggatgatgaggatcattggttgcagagagagaaggatccatggaggatttagtgagagagaaaaaatacaga  17980000                                                                                     <---------HSFB2a(2)                                                                                    <---------LBD16              <---------ARR11(3)                                                   <---------ANAC46              --------->ARR11(3)                         *TSS                --------->DAG2            ----------->ARR10                         <---------AHL20(2)    ---------->DOF2     <------MYB83                                <---------MYB46(3)     --------->AHL20(2)      -----     <------MYB46(1)                            <---------MYB52(1)      <---------AHL20(2)     ------ -------->ANAC58                               <-------GAMYB        <---------AHL20(2)     <------ZmHOX2a(1) -------->ANAC58                               <---------MYB52(1)  --------->AHL20(2)--------->HSFB2a(2)   gcaaggaaggtgatgagatttttgatttttagttttttttttttgtttcggttgttttaatttttcagataaaattaaaaaagttttgtggaaggagaag  17980100                      <------MYB46(1)                      <------MYB83                     --------->MYB111(2)                                   --------->At4g35610                     --------->ALFIN1                                      <---------At4g35610                    <--------P                                           <-----------RAV1(2)                  <------MYB83                                         ----------->RAV1(1)                  <------MYB46(1)                                     <---------ETT(2)                 --------->MYB59                                      <---------bZIP60(1)                 --------->MYB46(2)     <---------ZAT14               --------->ETT(2)      --------->AHL20(2)                --------->ZAT14               --------->bZIP60(1)    --------     --------->AHL20(2)   <------ZmHOX2a(1)    <---------ZAT6         --------->TGA2(1)   --------->GLK1(2) ------>GT1      --------->MYB111(1) <---------ANAC46              ----------->TGA1       <---------- ----->GT1     <---------MYB52(1)  --------->ALFIN1         <------ZmHOX2a(2)      ----------->GT1<--   ataaaaaataaaaaatagttaggttggaggagagagagtgtgtgtagtagtgtaagagagagatcgaaaatgacgacagatgagatagttaaaatctgac  17980200                                            --------->ALFIN1                                          --------->ANAC55(2)                                          <---------ANAC58                                          <---------ANAC58                                          <---------ANAC55(2)                                          <---------ANAC46                                          --------->O2                                          <---------bZIP60(2)                                          --------->TGA1a                                          <---------O2                                          ==========================bZIP_DOF                                         ----------->bZIP910(1)                                         ----------->STF1                                        <---------TGA2(2)                                       ----------->HVH21                                   <------ZmHOX2a(2)                                  <---------ARR14(2)                               --------->ANAC58<---------ANAC58                               --------->ANAC58<---------ANAC46                               <---------ANAC55(2)                               --------->ANAC46<---------ANAC58     <---------YAB1                               --------->ANAC55(2)                 <---------AHL20(2)                               --------->ANAC55(1) --------->MYB52(2)                              <---------LBD16 <------NtERF2        --------->AHL20(2)                          --------->ANAC58<---------TGA1a         --------->YAB1                   <-                          --------->ANAC58<---------bZIP60(1)    <---------YAB1               -------                          --------->ANAC46--------->bZIP60(1) <---------YAB1                  <------ --->HVH21              <-----------GT1----------->TGA1  <----------DOF2                      <------ -ARR10          <---------At4g35610------>ZmHOX2a(2)   <---------ANAC58               <----------DOF2 -----GAMYB  <-----------RAV1(1)  --------->ARR14(2)    <---------ANAC58       <---------ANAC46<-----   cgttgaaagtgtattttggtgctgatttacgacacggatcgatgacgtggcgttttttgcttttgttattaaaattgagttttgtgtttctttcaatttt  17980300         <-----------GT1 -----------------------ANAC81                                        ---------->DOF2 -->AHL20(2)                                                        <---------YAB1 ---AHL20(2)             <---------------AtSPL8                     <---------HSFB2a(2) ---AHL20(1)             --------------->AtSPL8            <-----------GT1                      <---- ----AHL20(2)<---------At4g35610      <-----------GT1  <---------AHL20(2)              <----------DOF2   ttttatatgtttttctgcttctctattcaagtaccatattaaactatatgtaaacattttttttctaattctgaaagtttttaaacatgctttcatttct  17980400                        <---------CCA1(1)                       <---------GLK1(2)                       --------->ARR11(3)                 <<<<<<<ZML2              <---------HSFB2a(2)              --------->HSFC1(1)              <---------HSFC1(1)       <---------AHL20(2)       <---------AHL20(1)                                                              <---------ATHB12       --------->AHL20(2)                                                          --------->MYB46(3)       --------->AHL20(1)      <-----------GT1                                   <-----------GT1-----      --------->AHL20(2)<---------RVE1(1)                                ------->TEIL ------>MYB83 <-    --------->YAB1     <---------ARR11(3)                             ----------->GT1 ------>MYB46(1) ------DOF2   --------->HSFB2a(2)    <---------GLK1(2)            --------->AHL20(2) --------->WOX13(1)   ttatactaataaatttctagaacaagattttttatactaaattctctacttaatatcggtttacaaaaaaaaatgtatatttctaaccaatcagtttttc  17980500                     <---------ANAC46                                                             ---                     <---------ANAC58        <---------ALFIN1                                   -----              <---------TOE2(3)       <---------ZAT18                                       <--------             <-----------GT1          <---------ZAT14                                --------------->AGL15   <----------DOF2   <---------ANAC58 --------->ZAT14             --------->ZAT6     <---------------AGL15 ---->YAB1  <-----------GT1        <---------ANAC46         <---------ANAC58         ================ --------GLK1(2)   <---------AHL20(2) --------->ZAT18       <---------ANAC58--------->ZAT6---------->DOF2   atattctttatgttttaacatttacttggattatatgatgtgcactaacaccttcttcattttcttgatcactatctcactctaattcaaaaaaaagaaa  17980600  Previous    Next  AGI:  At1g48620.1    Description:  HON5 (HIGH MOBILITY GROUP FAMILY A 5); DNA binding. similar to HON4, DNA binding [Arabidopsis thaliana] (TAIR:AT3G18035.1); similar to HMG I/Y like protein [Glycine max] (GB:CAC69997.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain High mobility group proteins HMG-I and HMG-Y; (InterPro:IPR000116); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 17977365    to: 17980057    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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