Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->YAB1                       <---------ATHB12                      ------>MYB46(1)                      ------>MYB83                    --------->AtMYB61                    <---------MYB55(2)               --------->ARR14(2)                --------->MYB46(3)                   <---------GLK1(2)               <------ZmHOX2a(2)               --------->ARR14(2)               --------->CCA1(2)               --------->ARR11(3)              --------->AGP1         <---------HSFC1(2)              --------->ARR14(2)     --------->HSFC1(2)              --------->ARR11(3)     --------->HSFB2a(1)              <---------ARR14(2)     <---------HSFB2a(1)    <-------GAMYB    ---------->DOF2 --------->MYB46(3)         <---------ARR11(3) ------->TEIL <---------ARR11(3)     <XXXXXXXXXXXXXXXXXXXXMIR159C ---DDF1    ----------->ARR10 <------ZmHOX2a(2)<---------ARR14(2) ->ETT(2) <------ZmHOX2a(1)  --------->ARR11(3)--------->AGP1 --------->WRKY12 -WOX13(1)===========================HOX2a_HOX2a<------ZmHOX2a(2)          <---------GLK1(1)   atgaatcaaagaggaagatccaccaatcgtagatcaaggagcttctctagatccagactcgccgttgaaggccattgaaatctcccatcacatttctcta  17969700                                              ------>NtERF2                                            <------NtERF2                                           ------>NtERF2                                           <---------ATERF1(1)                                          --------->bZIP60(1)                                          <---------bZIP60(1)              --------->ARR11(3)                                 --------------->AGL15                     <---------ARR11(3)                                 <---------------AGL15                     --------->AHL20(1)                                ----------------->AGL3                   <---------AHL20(1)                                ----------------->AGL2                   --------->AHL20(1)                                <-----------------AGL3                --------->AHL20(2)                                <-----------------AGL1  --------->YAB1--------->YAB1                            --------->AtMYB61--------->REM1(1)       <---------YAB1  ------>ZmHOX2a(1)                         ------>NtERF2    --------->ETT(2)        ------>ZmHOX2a(1) -----------------          --------------------->WRI1 <---------ICU4  ----------->GT1--------->AHL20(2)         <----------DOF2--------->DEAR3(1)<---------ETT(2)    <-----------GT1  <-------TEIL   tcgtcttcttccttttgagttttccgacgacctctccaaaaatggcgacaccatacagtaatattctccttataatatatattcatcctcgtctgaatcg  17969800                    <----------DOF2                   <---------ANAC58                   <---------ANAC58                                 --------->YAB1                  <------------------------ANAC81                   <---------ICU4             <------------------------ANAC81                       <---------YAB1         ------->TEIL                                           --------->ICU4         --------->ARR14(2)                                     <---------YAB1         <---------ARR11(1)                                   --------->YAB1         <---------ARR14(2)                             --------->YAB1<---------YAB1         --------->GLK1(2)                         <---------DAG2 --------->ARR11(3)        <---------CCA1(2)         <----------DOF2  <----------DOF2<---------ARR11(3)              <--        <---------ARR14(1)      ---------->ID1 <---------MYB52(1)--------->YAB1              <------- ---->WRI1  <----------DOF2 <----------DOF2------>ZmHOX2a(1)  <---------ICU4                 <-------   cacaaaaatcgaatcttttttgcttttgttctttgtctttttctcctccattactttatcaaaatcatgatcatgaaaatttctaaattttaaaactttt  17969900                                                                                             <-------                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(1)                                                                                     <---------AHL20(2)                           --------->ATHB12                                          --------->YAB1                           --------->ATHB51                                          --------->AHL20(2)                       --------->AHL20(2)                                        --------->AHL20(1)                       --------->AHL20(1)                                        <---------AHL20(1)                       <---------AHL20(2)                                        <---------AHL20(2)                       <---------AHL20(1)     <---------ANAC55(2)                --------->AHL20(2)                --------->GLK1(1)             --------->ANAC55(2)               --------->AHL20(2)            --------->HSFB2a(2)  <---------REM1(1)                         <---------HSFB2a(2) <----- ---------RAV1(1) <---------ATHB12          <-----------GT1                --------->HSFB2a(2) <----- ---DOF2    <---------HSFB2a(2) <---------TOE2(3)  <---------YAB1      <---------GLK1(2)<------------CBF --DAG2  <----------DOF2  <---------YAB1   <---------ATHB12         --------->AHL20(2)<---------AHL20(2)   ttgttggccctctttcagaaatcaatttattattgatgtagactaatcacgttttgaatgctagaaaaaaaaaaattctcgaataaattatattgtggtg  17970000                                                                                                  ---        <------MYB83                                                                             <---        <------MYB46(1)                                                                          ----       --------->MYB111(2)                                                                   --------       --------->MYB111(1)                          <---------------AGL15                    <-------   --------->DAG2                                   --------------->AGL15                    --------  ---------->DOF2                                  *TSS    ----------->GT1                  --------- --ANAC46                                          <-----------------AG                     xxxxxxxxx ----ANAC46        <------------CBF                <-----------------AGL2                   <-------- ----REM1(1)      --------->ATHB12               <---------YAB1                   <------ZmHOX2a(1)   tagaaaaagtaggtgtctcttcattgtttccaaagtgtatgagagtgtctcattcttgttttggttatatacaattggaacagaggaagagagagatatc  17970100       --------->MYB52(1)   --------->ANAC58   --------->ANAC58 ---------->DOF2 ------>LBD16 ------HSFB2a(2) ----->HSFB2a(2)                                   <---------ANAC58     ===========================HOX2a_HOX2a ->GLK1(1)                                         <---------ANAC58     ------>ZmHOX2a(2) --GLK1(1)                                     --------->YAB1           <---------ICU4 --------->HSFB2a(1) ->CCA1(2)                            <---------REM1(1) --------->ZAT6--------->ARR11(3)           -- >ARR11(3)                          <-------GAMYB<---------YAB1       <---------ARR11(3)    ------>ZmHOX2a(1) xxxxxxxxxx>smallRNA(se3)          <---------MYB46(3) <---------WRKY18(1)              <---------HSFB2a(1) -ARR11(3)                 --------->ATHB12   <---------YAB1---------->DOF2   ---------->DOF2 <------   cagaaaagctactggatggagcattctagtgatttgactgttgaagctatgatgcttgactctaaagcttctgatcttgacaaagaagaacgtcctgagg  17970200                                                                   <---------ANAC58                                                                   <---------ANAC58                   <----------DOF2                            <-----------RAV1(1)               <---------ANAC58                             <---------ANAC46               <---------ANAC46                          ----------->HVH21          --------->MYB55(2)                           <---------ZAT2          <---------MYB46(3)                 <------ZmHOX2a(1)--------->ALFIN1<---------------AtSPL8         --------->ALFIN1             <---------TOE2(3)--------->At4g35610    --------------->AtSPL3 --------->GT1 <---------ANAC58 <---------AHL20(2)     <---------At4g35610    --------------->AtSPL8 ---TOE2(3) <--------P         <---------ATHB12      --------->ZAT18<----------DOF2     <----------DOF2   tttgtgaaacagtggttgcttctttagtttctaatgaattgagattaggaatatgtgagctgatgtgttgctttgctatataggtactctctttaatccc  17970300                    <----------DOF2                   <---------ANAC58         <---------DEAR3(2)                   <---------ANAC58        <---------MYB46(3)            --------->At4g35610            --------->GLK1(2)          <---------AtMYB61                 <------MYB46(1)            --------->ARR14(2) --------->ZAT2                            <------MYB83            <---------ARR14(2) <---------At4g35610                      <---------MYB46(3)           --------->GLK1(1)   --------->At4g35610                ---------->DOF2           <---------GLK1(1)   <---------ZAT2       ----------->GT1 --------->DAG2   accatatgaagggaaatctgtgcttgaacttggagctggtattggtcgtttcactggtgaattggctcaaaaggctggtgaagttatcgctcttgacttc  17970400                                                 ----------->GT1                                         <---------MYB46(3)                                         <-----------RAV1(1)                                       <---------At4g35610                                       <---------ZAT2                                   --------->STY1(2)                                   <---------STY1(2)                                   --------->At4g35610                                   <---------At4g35610                         <----------DOF2                                  --------->MYB111(2)                      <---------ANAC58   <------                              <---------TOE2(3)  <---------ZAT6            <---------ANAC58 ---------                              --------->MYB59    <---------ANAC46    <---------YAB1      <----------DOF2 ---------->DOF2 ----------->GT1 <--------P <---------MYB46(3)     <-----------GT1<---------YAB1   atcgaaagcgcgattcagaaggtaaaactacttaggtagctagctgttgttgtgttaaaagtttctattttaccattgcttcttttgatttctttgatga  17970500                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                 <-----------GT1                                                              <---------bZIP60(1)                ----                                                              --------->bZIP60(1)              <-----     <----------DOF2                                          <---------REM1(1)                ------  <-----------GT1                                        --------->At4g35610                   ------ ---YAB1            <---------ZAT6                       <---------At4g35610                   <----- >YAB1          ---------->DOF2                        --------->ZAT18                 ---------->DOF2   tttttttctttgcagaatgaaagtgttaatgggcattacaagaacatcaagtttatgtgtgctgatgtaacatctccagacttgaaaatcaaagatggat  17970600  Previous    Next  AGI:  At1g48598.1    Description:  CPuORF31 (Conserved peptide upstream open reading frame 31) Range:  from: 17969532    to: 17973022    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g48600.1    Description:  phosphoethanolamine N-methyltransferase 2, putative (NMT2). Identical to Putative phosphoethanolamine N-methyltransferase 2 (NMT2) [Arabidopsis Thaliana] (GB:Q944H0;GB:Q9LP63;GB:Q9LP64); similar to NMT1 (N-METHYLTRANSFERASE 1), phosphoethanolamine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G18000.1); similar to phosphoethanolamine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT1G73600.2); similar to phosphoethanolamine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT1G73600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68187.1); similar to phos Range:  from: 17970051    to: 17973022    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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