Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 <---                                                <------MYB46(1)                       <---------AHL20(2)                                                <------MYB83                          --------->AHL20(2)                                               <---------TOE1(2)                      <---------AHL20(1)               --------->DAG2                  <---------TOE2(2)                     --------->AHL20(2)              ---------->DOF2       --------->YAB1                               --------->AHL20(1)          --------->AtLEC2          ----------->GT1                              <---------ARR11(3)        --------->YAB1       --------------->AGL15                               --------->AHL20(2) <----------DOF2             <---------------AGL15                               <---------AHL20(1)   taacttttattcatgaaaaagtagattacaactaaaaattgtaatttagtaggtttagacattctcaaacttatataactcaaaatattaaatttagtag  17965800       <---------AHL20(2)       --------->AHL20(2)     --------->TOE2(3)   --------->ICU4         ----------->GT1           ------>ZmHOX2a(1) -------->GT1    <---------ATHB12  <---------ZAT14 --------->TOE1(2) ---ZmHOX2a(1) --------->WOX13(1)  --------->ZAT14 --------->TOE2(3)               ---------->DOF2   gagtaaatattaattgtcaatctttctctggtgaaactacagtaagaaaacatcctaagaaaaacaaatttgagcaagagttctcaaaagtgttttgtat  17965900                                                                  --------->CCA1(2)         ---------                                                                 <---------AHL20(1)         <--------                                                            --------------->AGL15           ---------                                                           <---------ANAC58     --------->ATHB12                                   --------->YAB1     <---------ICU4           <---------AHL20(2)               ----------->GT1    <-------TEIL        <---------ARR14(2)      <---------WOX13(1)              --------->DAG2   --------->ATHB12       --------->ARR14(2)   --------->AHL20(2)             ---------->DOF2  --------->ICU4    --------->ANAC46 --------->AHL20(1)    ----------->GT1          --------->YAB1   <------ZmHOX2a(1)<-----------GT1<---------ANAC58<---------AHL20(2)   gtttataaacaaacataaagtttaaaataggaatgattcatatttttcacaaaccatatttgcttaatatataagaattaattgattaggggaaaatatt  17966000                                --------->At4g35610                                <---------At4g35610                         <---------ANAC58                         <---------ANAC58                         <---------ANAC46                        <<<<<<<<<<ABI3                                      --------->ICU4                  <---------AHL20(2)                                      <---------ICU4        <---------AHL20(2)     --------->ANAC58                           <--------HAHB4--------->ARR11(3)        --------->AHL20(2)     --------->ANAC58                           --------->YAB1<---------GLK1(2)  <---------At4g35610   <<<<<<<<<<FUS3                                   <---------YAB1 <---------ARR11(3) >AHL20(1)       --------->AHL20(2)                                      <---------AHL20(2) -AHL20(1)       <---------AHL20(2)               --------->YAB1 <---------DAG2       ----------->ARR10 >ARR11(3)---------->DOF2<---------AtLEC2 ----------->GT1        <----------DOF2--------->HSFB2a(2)<-   gtggagctaattaaaagaataaaatttgcatggaagctacaaaaatgaaaaatcagaacaaaactagctttttctataattactagaatagattttctta  17966100                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                       --------->ARR14(2)        <---------GLK1(2)                                                       <---------ARR14(2)      --------->LBD16                                                   <---------AHL20(2)   --------->AtMYB61                                                  <---------AHL20(2)   ----------------->AGL2         ------>ZmHOX2a(1)                        --------->AHL20(2)   ------------>CBF    --------->ZAT2                                --------->AHL20(1)--------->MYB46(3)         <-----    <---------At4g35610               --------->AHL20(2)    <-----------HVH21<---------LBD16   <-----    <---------ZAT2                    <---------AHL20(2)   ------>ZmHOX2a(1)--------->MYB52(1) <-----    --------->At4g35610      <----------ID1 --------->TOE2(3)   <---------At4g35610        <---------ANAC58 ----------GT1------------------------>ANAC81------>ZmHOX2a(1)  --------->At4g35610        <---------ANAC58   ttttccagctcctacaaatgaaaaaaaaaaaaaaacaaattttaatcctaaatttaatatcctgtcatctcccaccaataccggaatgtcatgacttgct  17966200                                             --------->At5g28300                                            --------->LBD16                                            ----------->GT1                                           --------->HSFB2a(2)                                           <---------HSFB2a(2)                                          <---------LBD16                                    <-----------------AGL1                                    ------>MYB83               ------>ZmHOX2a(2)        <---------ANAC58            ------>MYB46(1)           <------ZmHOX2a(2)        <---------ANAC58          --------->DEAR3(1)          --------->GLK1(1)      <-----------GT1            --------->At4g35610          <---------GLK1(1) <---------AHL20(2)              <---------At4g35610         --------->ARR11(3) ----ANAC58                    <---------ALFIN1 *TSS         <---------ARR11(3)         ----------->GT1 ----ANAC58             ---------->DOF2<----------DOF2       <---------AGP1        --------->YAB1 ----ANAC46        <---------MYB52(2) <---------DAG2   --------->YAB1    <----------DOF2-------------   tatttgattttcgtttctcccactaacaaagtctcacctccctttccggtaaaacaaaaataagatctcttgtttctttttggaatgaaaatgtaaacaa  17966300                                                                                 <---------PCF2                                                                                <------MYB46(1)                                                                                <------MYB83                                                                               <---------MYB46(3)                                                                               --------->MYB55(2)                                                                              <---------ANAC46                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                          <----------ID1      --------->ALFIN1                                                 --------->TOE1(3)--------->ATHB51                                          --------->TOE2(3)      <---------AHL20(1)      --------->HSFB2a(2)                               <---------TOE2(3) --------->TOE2(3)--------->ATHB12       <---------HSFB2a(2) ----------->ANAC81 <----------ID1       ----------->GT1<------ZmHOX2a(1)  <---------AtMYB61   <-----   acaaaaaaaaaaaccaaaaaaaaaaacaaatttgacgaagacaacgtaaaacgttagaggaagacaaattatttgctatggtgggtctcttctacaagat  17966400                                                                                       <------MYB83                                                                                  --------->ATHB12                                                                                  <---------ICU4                                                          <---------DAG2         <---------YAB1                                                       <---------ALFIN1      <-----------GT1           --------->YAB1                    --------->YAB1<----------DOF2<---------KAN4(2)          <---------ATHB12---------->DOF2    <---------AHL20(2)  <---------At5g28300   <------MYB46(1) ----GLK1(2)         <---------YAB1          --------->AHL20(2) <-----------GT1--------->YAB1       -   tgtttgtttgcaatgatatgtttctgataaaagttttttttttgcaattatatgttcacaccttttttaccgagagaattttcatcatttggtttcaacg  17966500              <------MYB46(1)             <---------AtMYB61            <---------WOX13(1)    --------->GLK1(2)                                                                         <------    --------->ARR11(3)                                                                        <------   --------->YAB1                                                                            <-------  --------->KAN4(1)                                    ------>ZmHOX2a(2)         <---------DAG2  <---------KAN4(1)    <---------AHL20(2)    --------->YAB1              <-----------GT1     -------- <---------KAN4(2)     --------->AHL20(2)  --------->GLK1(2)            <<<<<<<<<<GT-3b ------>ZmHOX2a(1) -------->YAB1<------MYB83     <---------TOE2(3)   <---------YAB1<-----------GT1 <----------DOF2   tagaataatcttggattggtcgaatttaaatttaagtttatgcagaatcatgtatgatcgtttcatttctctatttttcttcactttttcctactagctt  17966600                                                 <---------HSFB2a(1)                                                 --------->HSFB2a(1)                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)      <---------AHL20(2)           --------->ARR11(3)                                               <      --------->AHL20(2)           --------->ARR14(2)   <---------AHL20(2)                   --------     --------->AHL20(2)            <---------ARR14(2) <----------DOF2                       <-------- ---ANAC58                  --------->YAB1<------ZmHOX2a(1)                          <---------ARR14(2) ---ANAC58       <-----------RAV1(2)=============HOX2a_HOX2a       <---------ZAT18   --------->ARR14(2) --STY1(2)  <-----------RAV1(1)---------->DOF2 <-----------GT1     --------->ZAT18 --------->LBD16 <- ->STY1(2)  =================RAV   <---------ARR11(3) --------->TOE2(3)         ------>ZmHOX2a(1) <--   gagaaaaattaatcttgttgcaggggagaagcataaagatcggaggatgaaaccttctttaatggatagtctactaggtctcctccgtattcgcatcaaa  17966700  Previous    Next  AGI:  At1g48590.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G17980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69475.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 17966248    to: 17968095    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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