Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------TOE1(3)                                                                                --------->TOE2(3)                                                   ------>ZmHOX2a(1)       <------MYB46(1)                                                 ----------->RAV1(2)       <------MYB83                                                 <---------At4g35610      --------------->AtSPL8   --------->ZAT2                             <---------At4g35610         <---------------AtSPL3   <---------ZAT2---------->DOF2          --------->ANAC58                <---------------AtSPL8   <---------At4g35610                    --------->ANAC46             <---------MYB46(3)   --------->At4g35610                    --------->ANAC58       <---------ANAC58    <---------TOE2(3)  --------->ARR14(2)                 --------->ANAC46            <---------ANAC58<----------DOF2  <---------ARR14(2)        ==============================HOX2a_HOX2a  --------->MYB55(2)     ------- <------ZmHOX2a(1)          <------ZmHOX2a(2) <---------ZAT2  <----------DOF2 <-----------------AGL1   agaggagctggacgaacaaaaaagccctcgatccaattcaaaccacgctgctcctgactataagctttcttggtggatggtacctttaaggcattggcag  17930700                                                                            <---------------AtSPL3                                                                            <---------------AtSPL8                                                                       <---------ANAC46             <                                                                       <---------ANAC58            --                                                                       <---------bZIP60(2)         --                                                                       <---------ANAC58            --                                                                      <---------TOE2(3)            --                                                                     <---------TGA2(2)            ---                                       <----------DOF2              ----------->HVH21          ------                                 <---------ANAC58                   ----------->TGA1         --------                                 <---------ANAC58               ----------->HVH21           ------>ZmHOX2a(1)            --------->ANAC46   <---------ZAT18                  ------>ZmHOX2a(1)     --------->At4g35610    ------->TEIL              --------->ALFIN1                ----------->RAV1(2)   <---------GLK1(2) -------->AtSPL3 <---------MYB59 <---------PCF2--------->At4g35610 <---------WOX13(1)<---------ARR11(3)   tacttgaacccttcccgtccctaacttctccagtggggtctcttttatcggcagaatgcaagactcctgactgacgtagttgtacagcatcttcctcctg  17930800          ------>ZmHOX2a(1)     <----------DOF2  <---------ALFIN1                                                                   --------->LBD16 <---------ALFIN1                                                               --------->ANAC58 ------NtERF2                                                                   --------->ANAC58    - ------->ANAC58                                   ---------->DOF2       <---------ANAC58            < ------->ANAC46                              --------->YAB1             <---------ANAC58     <------- ---->NtERF2                                ----------->GT1             <---------ANAC46     -------- ------->ANAC58                            <---------TOE2(3)        <---------At4g35610     <-------- ------>RAP2.3(3)                        <--------P                 <---------ZAT2 <---------LBD16  < >ZmHOX2a(1)                      --------->REM1(1)                 --------->At4g35610  <------ZmHOX2a(1) --->RAV1(2)   <---------AHL20(2)<-------TEIL<------ZmHOX2a(1)<---------ZAT6    --------->ANAC46 ----   cccccaactttccttatgaaattgaagtaatctggtacatctggtaaggataaaaagcatccgagtgtgaagctgcttgagcacgcccggaggaagctct  17930900       --------->YAB1    --------->WOX13(1) -------->O2                                  --------->GLK1(1) ---------O2                           --------->ANAC58 --ARR11(3)                            --------->ANAC58 ->ARR11(3)                          --------->ZAT14                                    -------->P -At4g35610                          ---------->DOF2                                    ------>MYB83 ---------ANAC46               <---------ALFIN1              <---------ZAT6             ------>MYB46(1) ------->HVH21                ----------->HVH21   <----------DOF2                    --------->MYB46(3)   tgacgtctatcatctaagtcttgcactatgccctcacactgaagccagaactcttttgaagtagtcttagcacaagtttttgccaaaaccaacaagtctt  17931000                                                                 ------>MYB46(1)                                                                 ------>MYB83                                                               <---------MYB55(2)                                                             ------>NtERF2<---------------AtSPL8                  <------ZmHOX2a(1)                          ----------->RAV1(1)               <---------LBD16                    ----------->RAV1(1)    --------->DAG2        --------->ANAC46                     --------->RVE1(1) --------->MYB46(3)        --------->ANAC58                 <---------YAB1     <---------ALFIN1        --------->ANAC58    <----------DOF2  --------->CCA1(1) --------->AtMYB61      --------->MYB46(3)    --------------------->WRI1      --------->ANAC46                        <    <-----------GT1     <----------DOF2--------->YAB1      --------->MYB46(3)        <-----------GT1< --------->YAB1<-----------RAV1(2)    <---------YAB1     --------->PCF2 ---------->DOF2   *TSS <-----   caattgtaaccagcaactcaggatgactttctttgtttttatcataaatatccaacaggtccccaccaaatgcaaaaaggtccgaatttacttcttcctt  17931100                                     ------>ZmHOX2a(1)                                 --------->ARR11(3)                                <---------GLK1(1)                                --------->GLK1(1)                                --------->RVE1(1)    <---------YAB1                               --------->ARR14(2)  --------->ATHB12 ----------DOF2                <---------ARR11(3) --------->ICU4 ---------DAG2                 --------->ARR11(3) <---------YAB1<------------CBF                  --- -----DOF2                <-------TEIL          <---------At4g35610                 ------->TEIL ----   tgctttatcaaacttggttcgaattagattcaagatatcctgcataagagagatgattagagaatgcattgaacagatttaagatgaaactaatacagaa  17931200                                             --------->HSFB2a(2)                                             --------->YAB1                                        <---------HSFB2a(1)                                        --------->HSFC1(2)                                        --------->HSFB2a(1)                                        <---------HSFC1(2)                                   ------>MYB83              <------NtERF2                                   ------>MYB46(1)       <----------ID1        --------->At4g35610                                 --------->TOE2(2)      --------->DAG2         <---------ZAT2       <        ---------->DOF2          --------->TOE1(2)    ---------->DOF2          <---------At4g35610  -     --------->TOE2(3)        <-----------GT1--------->TOE2(3)  <---------ALFIN1             -------- ------>DAG2                 <-----------GT1----------------->AGL1  <----------DOF2          <------- ------>DOF2            <---------ARR11(3) <-----------------AGL1  <---------DAG2        ---------->DOF2   aaagtagcctcaaagactacctccaagttatttaacctacgaggcttccataatggaaaaggccgaacacctttcgagttcagctcatgagaaaagctct  17931300                                   --------->TOE1(2)                          --------->ZAT18                          <---------ZAT14                    <---------ANAC58         <------ZmHOX2a(1)--------->ZAT14 ---------GLK1(1)   <---------ANAC46        ---------->DOF2 -------->bZIP60(1) <---------ANAC58  --------->ANAC46                   <----------DOF2 ->ARR11(3)      <----------DOF2   <---------SPL7            <---------ANAC58                <------- --ARR11(3)<---------GLK1(1)    <-----------HVH21            <---------ANAC58   <------ZmHOX2a(2)   tgatatcaccaggaaacctctttcttggagcactggtcatacgaagtaaagcttgataacgaggcgagtctgactcttttggatcatccaaatcgtatga  17931400                        ---------->DOF2                  --------->ANAC58                  --------->O2                  --------->ANAC58              <-----------HVH21            <---------ANAC46             --------->ANAC46         <---------At4g35610                       <---------At4g35610             --------->O2             --------->At4g35610                       --------->At4g35610 --TOE1(2)   <---------O2   <-----------HVH21 ------->TEIL         <----------DOF2                <--   attctaaaacgatagacgtcaagtcacaaaggtcacatagagctgatgtatatagatagcacatactctctttttatcggtaagcagactagaaatacct  17931500                                         <------MYB83                                         <------MYB46(1)                                         ----------->GT1                                        --------->MYB111(1)                                        --------->MYB46(2)                                        <---------MYB46(3)                                        --------->MYB111(2)                                        --------->MYB55(2)                                       <---------MYB55(1)                                  --------->CCA1(2)                                 --------->ARR14(2)                                 <---------ARR11(3)                                 --------->ARR11(3)                                 --------->ARR11(1)                                 <---------ARR14(2)                               ----------->ARR10                              --------------->AGL15                              <---------------AGL15                             <-----------------AG                             <-----------------AGL1                             ----------------->AGL1                                              <---              <---------ZAT18----------------->AGL2             <----------DOF2                ------ <---------ANAC46            <-----------------AGL2        <---------At4g35610                 ------ <---------ANAC58            ======================================================================== <---------ANAC58            ----------------->AGL3      <-----------GT1                   --------->ANAC58 ---------RAV1(1)     <-----------HVH21<--------P--------->TOE2(3)      --------->TOE2(3)  --------->ANAC58   ctggtgtgcaaacttctgcgcttccttcagggccagatatggtaggtgataccttgaattgacctgctttgtaacatcaaaatcaaacttgagaagcaag  17931600  Previous    Next  AGI:  At1g48490.1    Description:  protein kinase, putative. similar to IRE (INCOMPLETE ROOT HAIR ELONGATION), kinase [Arabidopsis thaliana] (TAIR:AT5G62310.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68239.1); similar to hypothetical protein OsJ_011826 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28343.1); similar to hypothetical protein OsI_012847 [Oryza sativa (indica cultivar-group)] (GB:EAY91614.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Pr Range:  from: 17925647    to: 17931090    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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