Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                <---------bZIP60(2)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            xxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        <----------DOF2                                                       <---------ANAC58                                                       <---------ANAC58                                                       <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                      <-------TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <-----------RAV1(1)<---------ANAC58                                                 xxxxxxxxxxxxxxxx>smallRNA(i)                                                xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                ----------->RAV1(2)  <---------ANAC58                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                              xxxxxxxxxxxxxxxxx>smallRNA(le3)       <--------P                             ------>ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     ----------->GT1                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ANAC46                       <xxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->ETT(1)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxxxxxxxxxxxxxxx ---------MYB46(3)                        xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------P <---------ANAC58             xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -----GAMYB                            --------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------MYB46(3)  <---------ANAC46      <---------At4g35610xxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---ZAT2  <---------ANAC58         --------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) -->ZAT2 --------->MYB52(2)        <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------HSFB2a(1) ---At4g35610 ----------->HVH21<---------At4g35610------>ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(i)   ggttgtcgggttacttacgacggggattagtgaagctaatccgctgtccttcctggtgcgtttgtgccatggcttcatattaagggactggatagttcgt  17877800                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <---------WOX13(1)                                      --------->ARR14(2)                                      <---------ARR14(2)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  --------->SPL7                                 ------>NtERF2                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                <---------SPL7                               <---------ANAC58                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            -----                               <---------ANAC46                                               <------                    xxxxxxxxxxxxxxxx>smallRNA(s)                                       <xxxxxxxxxxxxx                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <---------ANAC58                    xxxxxxxxxxxxxxxx>smallRNA(i)                                   <xxxxxxxxxxxxxxxxx                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxx               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <---------TOE2(3)<---------ANAC46               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------MYB52(1) <---------ANAC58              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              <----------DOF2<----------DOF2------             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <-----------GT1    xxxxxxxxxxxxxxxxxxxxx            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <----------DOF2    <xxxxxxxxxxxxxxxxxxxxxx        <---------YAB1         <---------ANAC58           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)-------      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <----------DOF2     <---------YAB1 --------->ALFIN1 xxxxxxxsmallRNA(fl3)         <---------LBD16  <xxxxxxxxxxxxxxxxsmallRNA(i)   xxxxxxxxxxxxxxxxxxxxxxx   attgttcatgtttatagggaggctaatcgtcttgcggacggattggcgaactatgtcttttctttacctttaggttttcattcttttgagtgtgttcccg  17877900                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                                       <-------TEIL                                                    --------->ZAT2                                                    <---------At4g35610                                                    <---------ZAT2           <---------ARR11(3)                       --------->At4g35610           --------->ARR11(3)                      --------->MYB52(2)           <---------ARR14(2)                     xxxxxxxxxxxxxxxx>smallRNA(i)          --------->GLK1(1)                       <-----------RAV1(2)          <----------TaMYB80                     --------->TGA2(2)         <---------ARR14(2)                     <-----------TGA1         ---------->TaMYB80                     <-----------HVH21         --------->ARR14(2)                    ==================================bZIP_DOF      --------->HSFB2a(2) --------->MYB52(1)   <---------O2      <---------HSFB2a(2)--------->CCA1(2)     ==================================bZIP_DOF     <---------LBD16    --------->ARR14(2)     --------->ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->O2 ---->LBD16--------->ARR14(2)                  --------->TGA1a ---HSFB2a(2)           --------->ARR11(3)     --------->ANAC58 xxxxxxxxxsmallRNA(si3) <---------ARR11(3)     --------->ANAC58 xxxxxsmallRNA(le3)     <---------ARR14(2)     --------->bZIP60(2) xxxsmallRNA(le3) --------->HSFB2a(2)        xxxxxxxxxxxxxxxx>smallRNA(i) --->LBD16<---------GLK1(1)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xx>smallRNA(le3) <---------HSFB2a(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xsmallRNA(si3)<----------DOF2 --------->ALFIN1<---------TGA1a          <---------AHL20(2) --------->ALFIN1 -->HSFB2a(2)  ==========================================bZIP_DOF     <----------DOF2   --------->DAG2 >smallRNA(si3)------>ZmHOX2a(1)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        ---------->DOF2   agcatgttcgggatatccttttagaagataccggtggaacatgttttccacgtcaggtgcgtttgtactatgctttaattttggtttaataaagtagggg  17878000                                                        ----------->GT1  <---------ZAT6                                                       --------->DAG2    ----------->GT1                                             <----------ID1        <---------YAB1               <----                                             ----------->GT1   ----------->GT1                -------                        ---------->DOF2    ---------->DOF2   ---------->DOF2  <-----------GT1 <------         --------->AtMYB61         ----------->GT1    ---------->DOF2---------->DOF2   <------------CBF   agacaatcccaccaaaaaaaaaaaaaaaaagagccttgagttaaaaaaagaaaaaaaaaagtgaaaagtattaaagtgttaaactatctcattgtctgat  17878100                                                <---------MYB59                                                <---------DAG2                                                --------->TOE2(3)                                              ------->TEIL                                   <---------ARR11(3)                  --------->WRKY45 --------->GLK1(2)                  --------->WRKY38(1)        <-----------GT1 <-----------GT1                  --------->WRKY12--------->RVE1(1)   ------------>CBF       <---------ZAT14  <----------DOF2   --------------->AtSPL8 -----YAB1       --------->DOF5.7(2)     <----------DOF2   --------->YAB1          <-----------GT1 -->At4g35610    <---------MYB52(1)--------->ARR11(3)<-----------GT1            *TSS ---At4g35610   <-------GAMYB     --------->CCA1(1)  --------->YAB1      <<<<<<<<<TBF1   gagagagacttcagttttcgttgactctttctgaaaaaatcttctttgtaccttattacaatattacttctcttcttcttcttgttcaccatctctctta  17878200                                                          <-----------HVH21             ----------->GT1                             ===================HOX2a_HOX2a             <----------ID1                              ------>ZmHOX2a(2)         ---------->DOF2                                ====================HOX2a_HOX2a       ------>ZmHOX2a(2)                               --------->ARR11(3)      <------ZmHOX2a(2)                                <---------ARR11(3)     --------->ARR11(3)                          <<<<<<<GRF7     --------->AGP1                            =================HOX2a_HOX2a     <-----------ARR10                         ----------->HVH21     <---------ARR14(2)                        ------>ZmHOX2a(1)     <------ZmHOX2a(1)  --------->TOE1(2)     --------->ARR14(2)                        ================HOX2a_HOX2a         --------->ANAC58     <---------AGP1                      <-----------GT1<------ZmHOX2a(2)          --------->ANAC58     <---------ARR11(3)             ----------->GT1   --------->GLK1(1)            --------->ANAC46    <---------CCA1(2)         ---------->DOF2----------->RAV1(2)   <---------TOE2(3)  --------->GLK1(2)   tttcgcagatctaaagagaaaaaaaccatgagaaaaggaggtttaactcctgacagagatcgtcagattgaggaacatgagttgcaagaaactgggataa  17878300                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                               ------                                                                                             <-------                                                                                          --------->ALFIN1                                                                                         --------->LBD16                                                                                         <---------LBD16                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                     --------->GLK1(2)                                                                                     --------->ARR14(2)                                      --------->ANAC46                             <---------HSFB2a(1)                                    <---------ALFIN1                               --------->HSFC1(2)                          --------->TOE2(3)                                        --------->HSFB2a(1)            ----------->GT1   <---------TOE2(3)                                    <---------HSFC1(2)   <<<<<<<GRF7  ---------->DOF2     --------->REM1(1)                     <------ZmHOX2a(1)--------->REM1(2) ----------->HVH21    <------ZmHOX2a(1)--------->AtMYB61   <------ZmHOX2a(1)    <------ZmHOX2a(1) --- ------>ZmHOX2a(1)  <---------------AtSPL8   ---------->DOF2       --------->CCA1(2) <---------ARR14(2)   gtcctgacatagagaggttaaagaggaacattaatgctacaccataccaaagagaagaagaggaagaagatagagaggaacaggaagaatccgtggaggg  17878400     ---------->DOF2 -------->ARR14(2) ---------ARR14(2) -------->KAN4(2) --------KAN4(1) ------->KAN4(1) ---------TaMYB80                                               <----------DOF2 --------HSFC1(2)                                            ----------->ARR10 ------->HSFB2a(1)                                         <--------P --------HSFB2a(1)                                        <-------GAMYB  --------->ANAC58 -------KAN4(2)                                          <---------MYB46(3)                       <-- ----->GT1             <---------ANAC46                 <---------TOE2(3)--------->ANAC58      <----- --ANAC46        --------->ARR14(2)                <----------DOF2    <----------CDC5     --------->ATHB12 ------->TaMYB80 <---------ARR14(2)          <---------ICU4<---------MYB52(1)            <-------TEIL   aatattcgaaagcagagaggttccttcgtggaagaagcagttaacaattagggcttttgtggttagctttgcgctaagcattttgtttagcttcattgtg  17878500                                             <---------At4g35610                                             --------->At4g35610                                            <-----------RAV1(1)      <-----------GT1  <---------ICU4    ------->TEIL                    --------->ANAC58   --------->TOE1(3)  --------->ICU4     --------->ARR14(2)     <<<<<<<<<TBF1 ------->TEIL         <---------ATHB12   <---------ARR14(2) <---------ARR14(2) -------REM1(1)    <------ZmHOX2a(1)    <---------CCA1(2)   --------->ARR14(2) ----YAB1     ----------->RAV1(1) <----------DOF2   <----------DOF2      --------->ANAC58   atgaagcttaacctcacaacaggaatcattccttcgcttaatgtatctgctggtcttttggggttcttcttcgtcaagacatggactaagatgcttcata  17878600                                                                                <----------DOF2                                                                              ----------------->AG                                                                              <-----------------AG                                                                              ----------------->AGL2                                                                              <-----------------AGL1                                                                              ----------------->AGL1                                                                          <---------GLK1(1)                                                                         --------->ARR14(2)                          --------->ANAC46                              <------ZmHOX2a(1)          --                          --------->ANAC58                           <---------LBD16               --                    <----------DOF2      --------->At5g28300        ------>ZmHOX2a(1)  --------->At5g28300              --------->MYB46(3)    <---------ZAT14            <---------ANAC58<---------------AGL15      <----------DOF2     --------->ANAC58<---------MYB52(1)   <---------ANAC58--------------->AGL15   aatctggtcttttgaaacagccctttacaagacaagagaacaccgttattcagacttgtgtagttgcttcctcaggaattgcctttagcggtaatagaaa  17878700  Previous    Next  AGI:  At1g48370.1    Description:  YSL8 (YELLOW STRIPE LIKE 8); oligopeptide transporter. Identical to Probable metal-nicotianamine transporter YSL8 (YSL8) [Arabidopsis Thaliana] (GB:Q6R3K4;GB:Q94BX5;GB:Q9SX70); similar to YSL6 (YELLOW STRIPE LIKE 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT3G27020.1); similar to YSL5 (YELLOW STRIPE LIKE 5), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT3G17650.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48487.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48467.1); similar to Range:  from: 17878180    to: 17881065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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