Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->YAB1                                                 --------->AHL20(2)                                         <---------ANAC46                               <-----------GT1                                    <----------DOF2<-----------GT1                   <---------ICU4--                              <---------DAG2     <---------AHL20(2)            --------->TOE2(3) <---    <-----------GT1           <----------DOF2<---------YAB1            --------->AHL20(2)      ------   aagtttttacattcacttgtaatacccagtaactttttcttttgagtataatttaacatcatattcaaaaaaaaaaaataacttcaatttttaccaattt  17870500                                                                         <---------RAP2.6(2)                                                                        <---------At5g28300                                                                        --------->RAP2.6(3)                                                                    <---------------AtSPL3           <----------DOF2             <---------GLK1(2)           --------->AHL20(2)        <-----------GT1                <---------ARR11(3)       <------ZmHOX2a(1)       <-----------GT1                 --------->ARR11(3)       --------->YAB1      <---------AHL20(2)     <----------DOF2                   ----------->GT1 ------->YAB1              ---------->ID1                     <---------TOE2(3) --------GT1              <-----------GT1  <-----------GT1    <---------TOE1(3)    --------->TOE2(3) --->AHL20(2) <------------------------ANAC81          ----------->GT1 --------->MYB52(1)   aacatcattttatctttttttttttttttttcttttttaaagatttttctgaacatgaggttttaaggataaattacggccataacataaaacaatccca  17870600                                                                                 ----------->GT1        <------MYB46(1)                                                         --------->DAG2        <------MYB83                                                           ---------->DOF2      <--------P                                                             --------->CCA1(2)     <-------GAMYB                       <---------ANAC46               ---------->DOF2    <---------MYB46(3)       --------->HSFB2a(2)                    <---------------AGL15           -   aatttttggttggacaaattagtttttttttctagtatttgttttgtagatgagtttgtatgctatattgctataaaagataaaagtgaaatctctaaaa  17870700                                    --------->CCA1(2)                                   <---------ARR11(3)                                   --------->ARR11(3)                           --------->YAB1                              --------->YAB1          <------ZmHOX2a(1)    ------------>CBF  --------                              -------->HAHB4         --------->ICU4    <---------HSFB2a(2) --------->AHL20(2)                             <---------YAB1     --------->YAB1         --------->HSFB2a(2) <---------AHL20(2) --------->DOF2        ----------->GT1    --------->ANAC46           <-----------GT1----------->GT1   aaaaaagaagaagagattggctacttagttaataatagatatacacactaacataaggattaagagtttatttacagaacaatagtcagtgaattaaaag  17870800                                                                                          <----------DOF2                                                   <---------ZAT2                    --------->GLK1(1)                                                   --------->ZAT2                    <---------GLK1(1)                                                   --------->At4g35610              --------->ARR14(2)                                      <---------ARR11(3)                            <---------ARR14(2)                                      --------->ARR11(3)                  ----------->GT1<---------ANAC58     ---------->DOF2          --------->DAG2       <---------At4g35610   --------->DAG2  <---------ANAC58    <------ZmHOX2a(1)        ---------->DOF2    <------ZmHOX2a(1)       *TSS       <------ZmHOX2a(1)  --------->MYB59      ----------->GT1--------->AHL20(1)         --------->DAG2 --------->DAG2 -->DOF2           ---------->DOF2   --------->AHL20(2)         ---------->DOF2---------->DOF2   aagttaggaaagttagggtccaaaagagaaataaagcaaatatatacagaggaagctgcaagaagaaaaagggataaggcaaaaaggatttgcttttacg  17870900                                                      <---------MYB46(3)                                                   --------->ALFIN1                  <---------ANAC58                                                 <---------ANAC58                    <---------ANAC58                                                 <---------ANAC58              <---------ZAT14                                                 <------MYB46(1)               --------->ZAT14                                                 <------MYB83                 ------->GAMYB                                                --------->MYB55(2)            --------->ANAC46                                                <---------MYB46(3)           --------->MYB46(3)                                               --------->ALFIN1             -------->P                                         <---------ANAC58          <---------YAB1   <---------ZAT18                                         <---------ANAC58<---------ZAT14    <---------At5g28300        --------->ANAC58             <---------ANAC58--------->ALFIN1      --------->MYB52(1)        --------->ANAC58             <---------ANAC58<---------AtMYB61   <---------MYB52(2)     -----   aacagagagcgagccagagagagtgagtaagagagaatgacgagcgtgagtgggtgtggttcagtgagtctgataactaaccgcagtgcgttcttgggaa  17871000                       --------->TOE2(3)                                                     --------                       --------->TOE1(3)                                                  <---------ZAT2                  <---------MYB52(1)                                                      --------->ZAT2                 <---------RAP2.6(3)                                 <---------HSFB2a(2)  --------->At4g35610                <---------ANAC58                            <-------TEIL                  <---------At4g35610                <---------ANAC46                            <---------WRKY12      --------->AtMYB61        <---------ALFIN1------>ZmHOX2a(1)                   <---------WRKY38(1)  ----------------->AGL2 ---->MYB52(1)  <---------ANAC58                 --------->ZAT14   <---------MYB46(3)    --------->ANAC46   acggacttcaacaccgtgccgttttccttaaaccatggtcgtcttcttcgcttcagtctcggtccatggttgtcgaagccaaaaccaaaaccagcagcga  17871100               <---------ALFIN1           ------>NtERF2 --------->ANAC55(2)           <------NtERF2 --------->ANAC46          --------->RAP2.6(2)          --------->ANAC58          <---------ATERF1(1)          --------->ANAC58          --------->ANAC46--------->LBD16         --------->DEAR3(1)         --------->MYB46(3)                             --------->AHL20(2)   <---------ARR14(2) --------->ARR14(2)                <---------AHL20(2)                       ----   <---------GLK1(2)  <---------ARR14(2)             <----------DOF2                             <---   --------->ARR14(2)<---------CCA1(2)           ---------->ID1 <---------At4g35610          <------- ->At4g35610 <---------ALFIN1             <----------DOF2       --------->At4g35610          --------   agacagaatcgcccgccactctcgtatccgtaagaaggtgttctctttcttctcgcttttaatttcatctccaatgtctctaatattctcttgaagatag  17871200                                                                         ----------->GT1   <---------TOE2(3)                                           <---------YAB1         <---------ALFIN1 <---------AHL20(2)       <---------ANAC58                     <---------ATHB51      --------->MYB46(3) ------->GT1              <---------ANAC46                   --------->TOE2(3)     --------->ARR14(2) ------ZAT6               <---------ANAC58                   --------->YAB1     --------->ANAC55(2) --ARR11(3)           >>>>>>>>>SARD1      <---------------------WRI1     --------->YAB1         <---- ->ARR11(3)           >>>>>>>>>CBP60g  <---------ZAT6       ----------->GT1     <---------ANAC55(2) -   tgtttaatgtagaattgcgatgaaatttgggtgtttcattagagttcgaagaacacattgtaacgataattgaaatcgtaattcgtaaccacttctattc  17871300          <---------YAB1     <---------At4g35610                                                                          <--    <---------TOE2(3)                    ----------->GT1                                     <------MYB83    <---------TOE1(3)                  <---------ANAC46                                      <------MYB46(1)   <-----------GT1                    --------->ATHB12              <---------YAB1       <-----------RAV1(1) -----AHL20(2)                  ---------->DOF2        --------->YAB1   <-------TEIL<---------ANAC58 -------->YAB1             <---------AHL20(2)          --------->AHL20(2)           <---------ANAC58   aattttaagcttatgtttgggttttgcatttattcaaagttgattgtaatttgacaatgaaattagaaatgtgattcatcagtttttcttgatgttggtg  17871400  Previous    Next  AGI:  At1g48350.1    Description:  ribosomal protein L18 family protein. Identical to 50S ribosomal protein L18, chloroplast precursor (RPL18) [Arabidopsis Thaliana] (GB:Q9SX68); similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G17626.1); similar to unknown [Populus trichocarpa] (GB:ABK95541.1); contains InterPro domain Ribosomal protein L18, bacterial; (InterPro:IPR004389); contains InterPro domain Ribosomal protein L18/L5; (InterPro:IPR005484) Range:  from: 17870872    to: 17872010    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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