Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ----------->GT1           <---------ANAC55(2)         <---------ZAT14                        --------->REM1(2)           --------->ANAC55(2)         --------->ZAT14                        --------->ZAT14    ---------->DOF2             --------->AtMYB61        -----                        <---------ZAT14   <---------WRKY38(1)          ------->GAMYB           <-----                     ------>ZmHOX2a(1)    <---------WRKY12            --------->MYB46(3) --------->ZAT18            --------->ANAC58            <-----------HVH21            -------->P--------->AtLEC2------            --------->ANAC58           --------->WOX13(1)           --------->WOX13(1)   --------->At4g35610 ------ICU4 --------->ANAC46       --------->WOX13(1)          <---------MYB52(2)        <---------At4g35610   cattgcaatcttgttcgccattcctgtgtagtcaaatccatcagtcaaaggaatacatattagcaactatcaaccaaaaccatgcactgtgagcacaaca  17801600         <---------At4g35610       --------->DAG2                                       <---------AHL20(2)      ---------->DOF2                                    ----------->GT1 <-----------RAV1(2)                         --------->KAN4(1)   --------->YAB1    <-----------RAV1(1) -->GAMYB--------->At4g35610                <---------KAN4(2)   --------->ICU4------>MYB46(1) ----MYB52(2)                       ------->TEIL      --------->TOE2(3)       ------>MYB83 --->MYB46(3)                      <---------CCA1(2)<---------ATHB12     <-----------GT1   aactcaggtaaagctgaatatgaacacagagattgttgtatctaagaacattcaaacattagttaaatgatgaaatcaccaaattttgttggaatcgata  17801700                                                                                 <------ZmHOX2a(2)                                                                                 ====================                                                                             <------ZmHOX2a(2)                                                                             ========================                                                                            --------->AGP1                                                                      --------->WOX13(1)            -                                                                    <------ZmHOX2a(2)               -                                                          <---------YAB1 --------->YAB1             -          --------->ICU4           --------->ALFIN1     <-----------GT1 <---------ATHB12            <     --------->bZIP60(1)         <---------ANAC46 <---------YAB1   <---------ARR11(3)          ------     <---------bZIP60(1)      <---------AHL20(2)<---------At4g35610--------->ARR11(3)   --------->At4g35610   acaaatggtgtcattttggctacatactctatattatgtggagatggtgatgctgattttacaattagagatcaatcagatcgatcaataagctaaacaa  17801800               <---------ICU4               --------->YAB1              <---------ATHB12      <------ZmHOX2a(1)     --------->ANAC46                        --------->TOE1(2)    --------->LBD16                        --------->ARR14(2)   <---------LBD16                         --------->GLK1(2) ============HOX2a_HOX2a               --------->ANAC58 ============HOX2a_HOX2a               --------->ANAC46 -------->GLK1(2)                      --------->ANAC58 -------->ARR14(2)        --------->ANAC58 <---------ARR14(2)                                       - ------>TEIL  <---------ATHB51--------->ANAC58      ----------->GT1                                 - ---------ARR14(2)        --------->ANAC58<---------GLK1(2)     --------->ICU4                      - --->MYB52(1) --------->ICU4  --------->ANAC58     ----------->GT1   --------->MYB52(1)         <----   cgaatccaggaaacaaataatgaaattgaagcaagaaaaacaaggaatctgggaggctaaatcggaatgagtaacgaagtttaagaacgaagaaaggctc  17801900                                <---------ANAC46                                --------->DEAR3(1)                               --------->ATERF1(1)                               <------NtERF2                              <---------RAP2.3(1)                              <---------ERF1                             <---------ANAC46                             <---------RAP2.3(3)                             <---------DEAR3(1)                             <---------RRTF1(3)                             --------->DEAR3(1)                             <---------RAP2.3(2)                            <---------ABI4(1)                            --------->ATERF1(1)      <---------TGA1a                           <---------RAP2.3(1)       =========================================bZIP_DOF                          <---------DEAR3(1)         --------->O2                     ------>NtERF2                   --------->TGA1a                    <---------RAP2.6(2)              <---------O2                   --------->RAP2.6(3)              <------NtERF2                  <---------DOF5.7(2)              ------>NtERF2                 ----------->HVH21                <---------DEAR3(1)                 --------->WRKY12                 --------->DEAR3(1)              <---------ANAC58<---------DEAR4(2) --------->ATERF1(1)              <---------ANAC46------>NtERF2      <------NtERF2                                      -              <---------ANAC58<---------ATERF1(1)--------->RAP2.3(1)                               --       ---------->DOF2  <---------ATERF1(1)     ------>NtERF2                                      -- -------->ANAC58 --------->WRKY38(1)            <---------ATERF1(1)                  <---------TOE2(3) -------->ANAC58 --------->WRKY45               <---------RAP2.3(1)                ---------->DOF2 <- -------->ANAC46--------->DOF5.7(2)            <---------DEAR3(1)      <---------ANAC58        <----- -----ALFIN1 <-------TEIL--------->SPL7     ----------->HVH21          <---------ANAC58       <------   acccgaaatgaaagatgcgttgacggctacggcggcgaggtttgatacgacggcgacgagagagaaatcgcttccgttccaatactaaaggttgttttgg  17802000                                                                                   <--------HAHB4                                                                       <---------ANAC55(2)                                                                       --------->ANAC46    <---------RVE1(1)                                                                       --------->ANAC58    <---------CCA1(1)                                                                       --------->ANAC58   <---------AHL20(1)                                                                       --------->ANAC55(2)<---------ARR11(3)       --------->At5g28300                                            --------->ZAT18     --------->ARR11(3)      *TSS                                                        --------->DAG2   <---------ICU4  <---------YAB1                                          --------->ANAC58----------->RAV1(1) -------->CCA1(2)                                 <----------DOF2 <---------------AtSPL8<---------YAB1 -------->TaMYB80                    --------->ANAC55(2)  --------->ANAC58--------->MYB52(1) ------->ARR14(2)                   --------->MYB59    ----------------->AGL1     <---------YAB1 --------ARR14(2)          <---------ANAC46       <---------DAG2  <---------------AtSPL3<---------TOE2(3) ----LBD16             <-----------HVH21       <---------ALFIN1  ---------->DOF2  --------->ICU4 ---ANAC46        ------------>CBF  <---------TOE2(3)  ----------------->AG     --------->YAB1      *TSS   ggatatgactgtaattctaaaacaatgttaggggtatttaggtatttcaacacttttgccaagtaagtaaagtacgcaacagtgatcattaagatatttg  17802100                  <---------YAB1--------->ZAT6          ---------->DOF2 --------->YAB1                                               ----------->HVH21      <---------ZAT6      <---------ICU4 <---------DAG2                     --------->AtMYB61      ----------->GT1  --------->YAB1    <----------DOF2   ---------->DOF2 --------->MYB46(3)     <--  ---------->DOF2 <------ZmHOX2a(2)   --------->ZAT6  <---------ANAC46  --------->MYB46(3)        ---   ttttaaaagtgttaaagacgatcattcatcatcaacactaacactttttcaaattgtcgtctaaagtctctaaaaccaccatcgaagtcttgacagagag  17802200                                                                                                <----                                                                                                -----                                                                                            <--------                                                                                          -----------                                                                                          <----------                                                                                         <-----------                                                                                         <-----------                                  <---------ANAC46                                       ============                                  <---------ANAC58                                       <-----------                          <---------MYB52(1)     ----------->GT1                         <-----------                         --------->LBD16        <---------------AtSPL8            <---------ANAC55(1)               <---------GLK1(2)  <---------ANAC58                                <---------ANAC46    <---------ARR14(2)  --------->ANAC55(2)     --------->DAG2       <<<<<<<<<TBF1--------->ANAC55(2)    --------->ARR14(2)  <---------ANAC58       --------->DAG2 <----------DOF2     <---------ANAC55(2) -------ARR14(2)        <---------ANAC58      ---------->DOF2 <---------DAG2   <---------MYB52(1) ------>ARR14(2)        <---------ANAC46  <----------ID1 ---------->DOF2   ------>ZmHOX2a(1)<--------   aattcgaatcggacagagaatttcttccgtagtttttcttgtaagcgaaaaaggtaaataaaagctttttcttcttcctctgttacgagtttctcttttt  17802300      --------------->AGL15      --------->TOE1(3)      --------->TOE2(3)     ----------------->AGL1     ----------------->AG  <----------DOF2 -----------AtSPL8 ---------->AtSPL8 -DAG2<---------------AGL15 ---->AGL15                                                        --------->ATHB12 -----AGL15                                                       <---------YAB1 ------AGL3                                                    <---------YAB1            --------->ATHB12 ------AGL2                                              <-------TEIL<---------YAB1 <---------YAB1 =====================MADS_MADS                         <--------P--------->ICU4  --------->YAB1 ------AG                                            <---------TOE1(3)          <---------ARR11(3) ------AGL1             <----------DOF2              <---------TOE2(3)          --------->ARR11(3) --DOF2------>ZmHOX2a(1)<---------DAG2              <-----------RAV1(2)---------->DOF2 <---------WOX13(1)   ggtactttccttaaatgtcaaaaacccttttttaagaaccgagggtttcgaatttcaggttgattttgatgattaaagggaatatcgtaattgatttcat  17802400                         ----------->GT1                        <---------TOE1(2)                        <---------TOE2(2)        ---------->DOF2       --------->AHL20(2)    <------MYB83                       ------>ZmHOX2a(1)    ----------->GT1    --------->ANAC46              <------MYB46(1)                      --------->TOE2(2)   <---------ANAC58     --------->ANAC58             <--------                   <---------ARR14(2)     <---------ANAC46     --------->ANAC55(2)       <---------MYB46(3)                   --------->ARR14(2)     <---------ANAC58     --------->ANAC58          <-----------RAV1(1)                   ------->TEIL        --------->WRKY45       <---------LBD16       <---------ANAC58                  <---------CCA1(2)    --------->WRKY12     --------->ETT(2)        <---------ANAC58            <---------GLK1(1)          --------->WRKY38(1)  <---------WRKY12     <----------DOF2<----   gtttttcaagtttgaaatctgtatcctaggttaaaacctcgttgacttgtgaaaagtctaggtctacggaacataaaatgtctctttcttgttgttggtg  17802500  Previous    Next  AGI:  At1g48200.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61860.1) Range:  from: 17800433    to: 17802006    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g48210.1    Description:  serine/threonine protein kinase, putative. similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17410.1); similar to Pto kinase interactor 1 [Lycopersicon esculentum] (GB:AAC61805.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 17802100    to: 17805656    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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