Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ARR14(2)     <---------ARR14(2)    --------->GLK1(1)                                                             ------>ZmHOX2a(2)    <---------GLK1(1)                                                             --------------->AtSPL8 ---------->GT1                                                                 <---------ARR11(3) ------->DAG2                                                                   --------->ARR11(3) ------>DOF2                                                             <---------ANAC55(2) ->At5g28300         ---------->DOF2       <-----------GT1               --------->ANAC55(2) -->GT1  ------>ZmHOX2a(1)              <---------YAB1<----------DOF2<-----------HVH21      <--------   aaaggcaaatcctttggacataccaaagtgtcaaactatatgatgaaaccattcttctttccctctatatttgtcacttgatgatctgtactattgaatt  17793800                                                                                           --------->ZAT14                                                                                           --------->ZAT18                                                                                           <---------ZAT18                                                                                  --------->AHL20(2)                                                                                <----------DOF2                                         --------->O2                          --------->TOE2(3)         --------->MYB46(3)              <---------O2   --------->YAB1         --------->TOE1(3)        <---------At5g28300              <---------ANAC46                 <---------MYB52(2)       <-----------GT1       <---------ANAC46      <---------AHL20(2)    --------->At4g35610 -AHL20(2)                 <---------ANAC46      <---------AHL20(2)      <---------At4g35610       --   gatacagagttaccaccaagaattagatgatgtgtgtatattgacgtctatataaaaatcagaagttgttttggcatctaacctttaaatttgtgaactc  17793900                                             <---------MYB52(1)                                           <------MYB46(1)                                           <------MYB83                                          --------->MYB59             --------->AHL20(2)       <------MYB83         --------->ANAC58         --------->AHL20(2)           <---------MYB46(3)   --------->ANAC58       ----------->GT1                <------MYB46(1)      --------->ANAC46     ------>MYB83                    --------->MYB59       --------->ANAC55(1)     ------>MYB46(1)        <---------AHL20(2)   ---------->ID1 --------->HVH21---------->DOF2      <---------AtMYB61    <---------LBD16    --------->LBD16   tctgaccaaatgtaaataaaaagaattgatttttttggtttggttcggtttggccttacacacggaaactaattggacccgaataaaccgaaattgaaca  17794000                                             <----------DOF2                                       <---------ARR11(3)                                     --------->ICU4                                     <---------YAB1                               --------->AHL20(2)                                         <-------MYC3                   --------->ZAT14 <---------ICU4              --------->TOE2(3)   <---------ANAC46               <-----------GT1 <---------AHL20(2)          <---------CCA1(2)       <---------ANAC58          <---------YAB1      <---------ATHB12       <----------DOF2               <---------ANAC58 --------->TOE2(3) <---------ZAT14 --------->YAB1<-----------GT1         ------>NtERF2<------NtERF2 --------->TOE1(3) <---------ZAT18<---------ATHB12<-----------GT1       --------->DEAR3(1)------->MYC3   aaaccctaaattatgttttacttcactcttcaataaatcatgattttcttttaaactttttatatccataaacgacgacgttttggctggcatatggttt  17794100                                                                             <---------RAP2.6(2)                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                         <-------GAMYB                                                                        ------>ZmHOX2a(2)                                                               <---------ANAC58                   <---------WOX13(1)                          <---------ANAC58                  <------------CBF                            --------->HSFC1(2)                   --                 <------ZmHOX2a(1)                            <---------HSFC1(2)                  <--                <---------YAB1                             ====================HOX2a_HOX2a        <--               <---------TOE2(3)                   <------------CBF     <---------MYB46(3)       ----     <-----------GT1                <---------AHL20(2)     <------ZmHOX2a(1)*TSS                 <---   gggtttttcacaaaatttaggattgatatttttagttttttattctcagagacgattgtgaggaagcttgttgatcgttgcggtctgagtaagcgagtag  17794200                                                    <-----------GT1                                                    --------->YAB1                                                 --------->YAB1         ---------->ID1                          <---------ICU4   <---------MYB46(3)                           --------->KAN4(1) ------->ATHB12                             --------->LBD16 ----ZmHOX2a(2)                            --------->HSFB2a(2)               <----------DOF2 -------YAB1                               <---------HSFB2a(2)           <----------DOF2 ----->ARR11(3)             <---------GLK1(2) --------->YAB1            <---------DAG2 ------ARR11(3) <----------DOF2 <----------DOF2<---------KAN4(2)     <-----------GT1              <--   atcattggtttgtctcttctttcttacttcgattctttgcttcatccagaataatcacagttccaattctattacctttctttttggtgtttgtgactct  17794300                                                                                                    <                                                                                             --------                                                                                             --------                                                                                           <---------ALFIN1                                                                                           --------->ZAT6                                                                                          <<<<<<<GRF7                           --------->ANAC58         <-------TEIL                        ------>ZmHOX2a(1)                           --------->ANAC58    ------>ZmHOX2a(2)             --------->MYB52(2)  ----  <-------TEIL<-----------RAV1(1)             <---------At4g35610       <---------YAB1  ----------->HVH21 -------TOE1(2)<-------GAMYB           <----------DOF2                ----------->GT1 ----------->RAV1(2)   tatgttcatagctcttctgttgaattcacaagcattgttttctttttgatctgattcatccctgagagcataatgtgattagttgtattcctgacactcc  17794400    <---------ANAC58    --------->ANAC55(2)    <---------ANAC55(2)    <---------ANAC58    <---------ANAC55(1)    <---------ANAC46 <---------MYB52(1)                                                                         --------- -----------HVH21                                                        ---------->DOF2    --------- ->ANAC58                                                      ----------->GT1              <-------- ->ANAC58    <-----------GT1    <---------AtMYB61              --------->ANAC58             <-------- -->ZmHOX2a(1)      <---------AHL20(2)                         --------->ANAC58     <----------DOF2<-   tctgttacgtgtattttactatttagtttcagttttggtagacacatataaactgagaacattgcaagtaaaaaaaaaagagttttctttgagaaatttc  17794500                         ----------->RAV1(2)                       --------->GLK1(2)                       --------->ARR11(3)          <---------GLK1(1)          --------->CCA1(2)         <---------ARR14(2)      ------>ZmHOX2a(1)         --------->ARR14(2)  <---------ARR14(2) >HSFB2a(1)            --------->ARR14(2) >HSFC1(2)<----------TaMYB80 --------->ARR14(2)                                             <-------- -HSFB2a(1)            <---------ARR14(2)                         <---------ICU4         <---------AHL20(2) -HSFC1(2)--------->GLK1(1)------>ZmHOX2a(1)                    ------->TEIL             <-----------GT1 ---------DOF2  ---------->DOF2------>ZmHOX2a(2)               <---------CCA1(2)  ----------->GT1   tctttagaatggatatgccaaagagtatcctgatcctctacttagctatataactagggatttttgaatctttgctatcaggttttgttatttactttct  17794600                                                        <---------AHL20(2)                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                       --------->YAB1                                                      <---------YAB1                                                    <---------ICU4                                                    <--------HAHB4                                                   --------->ICU4               ---------->DOF2                     <---------YAB1              --------->YAB1                     --------->YAB1             <---------YAB1                 --------->ARR14(2)    --------->ANAC58                        <---------GLK1(2)                 ----------->GT1    --------->ANAC46                        <---------ARR14(2)                <---------ANAC55(2)    --------->ANAC58                       <------ZmHOX2a(1)                <-----------RAV1(2) --DOF2    --------->YAB1      <------ZmHOX2a(1)<---------YAB1            <-----------HVH21   ctggccaagccaactataaaagttaatggaagaggaccattgtgaggattctcataattatatgggttttgctctgcatcaggtaaaactagtattggtt  17794700  Previous    Next  AGI:  At1g48170.1    Description:  similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95965.1); similar to hypothetical protein OsI_036449 [Oryza sativa (indica cultivar-group)] (GB:EAY82490.1); similar to Os12g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066323.1) Range:  from: 17792455    to: 17793762    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g48175.1    Description:  EMB2191 (EMBRYO DEFECTIVE 2191); catalytic/ hydrolase/ zinc ion binding. similar to cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] (TAIR:AT1G68720.1); similar to CMP/dCMP deaminase, zinc-binding [Medicago truncatula] (GB:ABN08468.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193) Range:  from: 17794176    to: 17796000    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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