Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ANAC58                                   <---------ANAC46             <---------ANAC58                                <---------SPL7                  --------->ANAC55(2)                                --------->TOE2(2)      <---------ANAC46                               <---------ANAC58        <---------YAB1                               <---------ANAC58  <---------ATHB51                          <---------REM1(1)      --------->ICU4           --------->ANAC55(2)--------->YAB1<---------ANAC55(1)<---------ZAT18 --------->AtLEC2              <---------ANAC55(2)<---------ICU4<---------ANAC46   <---------ZAT14 --------->ANAC58             --------------->AtSPL3   <---------ANAC58            --------->ZAT14 --------->ANAC46             --------------->AtSPL8   <---------ANAC58        <---------AtMYB61 --------->ANAC58             <---------------AtSPL3   <---------ANAC55(2)     <-----------RAV1(1) -----TEIL            <---------TOE2(3)          --------->AHL20(2)            --------->ALFIN1 ---->TEIL         <---------AHL20(2) --------->REM1(2)<---------ANAC55(1)   <---------bZIP60(2) -------->AtSPL3   <---------YAB1  <---------ANAC58  <-----------GT1         <---------ANAC46 -------->AtSPL8--------->ARR11(3)------->TEIL   <---------AHL20(2)       --------->ICU4   --------->ALFIN1 ---------AtSPL8<---------ARR11(3)<-------TEIL   --------->ICU4 <---------ANAC58<---------ANAC46 ---AGL15      --------->YAB1<-----------GT1   --------->YAB1   <---------ANAC55(2)--------->ZAT18   tacatgcaagtattgtatgatattaatgtttttacgtacgtgtaaacaaaaataattacgtttgtaacgtatggtgatgatgtggtgcactaggtgtagg  17785300                                                    --------->AHL20(2)                              <                                            <---------TOE2(1)                                      <-           ---------->DOF2                 --------->SPL7         <---------ARR14(2)           <-----         --------->AHL20(2)            <---------------AtSPL8     --------->ARR14(2)           <-----         <---------AHL20(2)        <---------MYB46(3)   <-----------GT1                       <------         --------->YAB1  <---------------AGL15      <---------AHL20(2)              --------->ARR14(2)      --------->YAB1     --------------->AGL15     --------->AHL20(2)            <---------MYB59   <-   ccttgtattaataaaaagaagtttgttctatatagagtggtttagtacgacgatttatttactagtcggattggaatagagaaccgaattcttcaatcct  17785400                                                      --------->ANAC55(2) ----------DOF2                            <---------AHL20(2)                                      -- --------ANAC58                           <---------AHL20(1)                                      --- ----ANAC58                               <---------ARR11(3)        --------->YAB1               ---- ----ANAC58                               --------->AHL20(1)       <---------YAB1          <---------AtLEC2 ---ICU4                                  --------->ARR11(3)  <---------At4g35610      --------->At4g35610 --------ANAC58                  ---------->DOF2      <---------ANAC55(2)              <---------At4g35610   tgcttttgatcaagaattgaaaccgaatcaaatgtaaaagttgatatatttgaaaaacgtattgagcttatgaaaatgctaatactctcatctgtatgga  17785500                         <----------ID1     <----------DOF2 ---------->DOF2 --------->GT1 ------>MYB46(1)        ---------->TaMYB80                                   <---------ANAC46 ------>DAG2   ------>MYB83     --------->DAG2                  <---------ARR14(2)         <---------ANAC58 ------>DOF2 <---------MYB59  ---------->DOF2                   --------->ARR14(2)         <---------ANAC58   aaagtgactttaaaaccgaacttaaaagtgacaaaaggggaatatcgcatcaaaccgaatgaaaccgatatgaaaccgcatcaaaccgatatagcgtgaa  17785600                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                                                 --------->RAP2.6(3)                                <                                               <---------ZAT14                                    ---                                               --------->ARR14(2)                     <-----------GT1                                             ---------->TaMYB80                    <---------ARR14(2)                                          --------->ZAT18                          --------->ARR14(2)                              <------ZmHOX2a(1)<---------ARR14(2)                 <----------TaMYB80-                          --------->LBD16 <---------PCF2                   <---------ARR14(2)   -----                        <---------LBD16--------->ALFIN1<------NtERF2       --------->ARR14(2)   <----   ccaaaatgtggattaatgacatttagaccggaggaacataagtggggactatacggcatcgttttagtgtataagtgaattcgcatattcacgagttccc  17785700                                               <---------ANAC58          <---------MYB46(3)             <---------ANAC46          ----------->GT1              ------>NtERF2         <---------MYB55(1)           <---------DEAR3(1)         <--------P                 <---------ATERF1(1)        <---------MYB52(1)         --------->DEAR3(1)     <---------LBD16               --------->ETT(2)    <---------At5g28300            ----------->HVH21   <-----------GT1                 <---------DEAR3(1) ---------ARR14(2)                --------->ATERF1(1)       <---------ALFIN1 ------>LBD16                     <------NtERF2<---------ANAC58                          <-----------GT1 -------->ARR14(2)              <---------DEAR3(1) ----------->HVH21                    <---------AHL20(2) ---->LBD16*TSS       <---------DEAR3(2)<------NtERF2     <---------ALFIN1   <---------HSFB2a(2) -----LBD16<-------GAMYB <-------TEIL--------->ATERF1(1)  --------->AtMYB61  --------->HSFB2a(2)   cgtattcaccggttgttatatcgtcgattcatcgtcgtcgacggcgagtacttgtgacctccacacccagattaatcttctataactgattttatcgctt  17785800                                                        <---------ANAC58        <---------AHL20(2)          ------>ZmHOX2a(2)                             <---------ANAC46        --------->AHL20(2) <-         <------ZmHOX2a(2)                            <---------ANAC46    --------->TOE2(3)  <-------        --------->ARR11(3)     <---------YAB1------>ZmHOX2a(1)            --------->YAB1     --------        <---------ARR11(3)    <---------KAN4(2)<----------DOF2         <-----------GT1   <------ZmHOX2a(1)    --------->YAB1   <---------At5g28300  ------>ZmHOX2a(1)<-------GAMYB <---------YAB1  ============   <------ZmHOX2a(2)--------->MYB52(1)--------->ARR14(2)<---------ANAC58<---------TOE2(3)============   agacgatcacgatctcatcgattaactgtgagtataatcgattcctcctctttattttgtgtgttgtatcgatttacgataattttttggaggaacatct  17785900          <---------MYB52(1)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     <---------ARR14(2)                                         <---------At5g28300     --------->ARR14(2)                                        <-----------GT1     --------->ZAT18 ---------DOF2                                          <------MYB83               <---------ZAT18 --ARR11(3)             <---------AHL20(2)              ----------->GT1            --------->ZAT14 ->ARR11(3)  <-----------RAV1(1)                        <------MYB46(1)            <---------ZAT14 =============HOX2a_HOX2a       <----------DOF2    --------->ATHB12       <---------MYB46(3) <------- ============HOX2a_HOX2a--------->AHL20(2)      --------->YAB1 <<<<<<<<<GT-1   <-----------RAV1(1)   cctttcggatcggttttgttgggaatttatatttctttgccatggttttatcttgatttggtgatttaccttgtgtttgttctggtgtactatttagcta  17786000                       <---------HSFB2a(2)                       --------->HSFB2a(2)                    <---------YAB1                 <---------YAB1                                                              <-------               --------->At4g35610                                               <------ZmHOX2a(1)<--           <-----------HVH21   <----------DOF2                                 <---------TOE2(3)  <--          <----------DOF2 <------ZmHOX2a(1)                                    <---------TOE1(3)  <-- --At4g35610   <---------At4g35610                 <----------DOF2        <---------ZAT6   <---------AHL20(2)   atttagtataagctttcagatgattctaggaaacttttgtgctactgttttcggtttttggtgatagaactatgtagttttaaggaaccatataaaaatt  17786100  --------->HSFB2a(2)                                                                        <-------  --------->HSFC1(1)                    <--------P            ------>ZmHOX2a(1)             <--------  <---------HSFB2a(2)                 <---------MYB46(3)  <---------ARR14(2)             <---------GLK1(2) --ICU4                        --------->YAB1             <---------GLK1(1)             <---------At4g35610 -------ANAC58              --------->WOX13(1)--------->CCA1(2)                         --------->At4g35610 -------ANAC46  <---------TOE1(3) --------->ATHB12        --------->ARR14(2)          <-----------RAV1(2) -------ANAC58  <---------TOE2(3)<---------YAB1   <---------AHL20(2)        --------->ANAC46<--------   tcgtctagaaatgtttctatggttactgatcagtcatcagtggtagcgatatgaaattggaatcctgttttttgttacacggttcgattcagatgctttc  17786200  Previous    Next  AGI:  At1g48130.1    Description:  ATPER1 (Arabidopsis thaliana 1-cysteine peroxiredoxin 1); antioxidant. Identical to 1-Cys peroxiredoxin PER1 (PER1) [Arabidopsis Thaliana] (GB:O04005;GB:Q42319;GB:Q84WE3); similar to 2-cys peroxiredoxin, chloroplast, putative [Arabidopsis thaliana] (TAIR:AT5G06290.1); similar to peroxiredoxin antioxidant [Brassica napus] (GB:AAF61460.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 17784171    to: 17785396    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g48140.1    Description:  dolichol-phosphate mannosyltransferase-related. similar to unknown [Vitis vinifera] (GB:AAP30738.1); contains InterPro domain Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174) Range:  from: 17785711    to: 17787880    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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