Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ------->GAMYB             <---------YAB1                          --------->MYB46(3)    <----------DOF2                        <-----------GT1       <---------------AGL15                     --------->YAB1           =======================================================          <---------At4g35610                 --------------->AGL15 ---------ID1    <---------AHL20(2)         ---------->ID1       --------->YAB1      ---------->DOF2 ---->DOF2--------->At4g35610              <-----------GT1--------->YAB1       --------->YAB1    ----   agctacaaaatcagcttaatttatagtaaccacatacaagttttttttctcttttatgaaacataagtcataacataactataaaaaaaaagagttgaat  17763400                                      <---------YAB1                                      <---------------AGL15                              --------->ANAC55(2)        <-----------GT1                            <-----------GT1           --------->AHL20(1)                            --------->AHL20(2)        --------->ARR11(3)                        <---------AHL20(2)            <---------ARR11(3)                        --------->AHL20(2)          --------->AHL20(1)                       --------->AHL20(2)      --------->AHL20(2)                      <---------AHL20(2)     ----------->GT1    --------->ANAC55(2)                    <---------YAB1  --------->YAB1  <---------AHL20(1)       <---------WOX13(1) =====================================================MADS_MADS <---------ANAC55(2)              <--- ----->AHL20(2)----------->GT1<---------ANAC55(2)  --------->AHL20(2) <---------AHL20(2)   ----------   taaactaaaactaagtgatgttattttaaattacttatttataaatgaagtaaatatatattccctacgtattaaaaagattgattttctaaggggtttt  17763500                                                                         <------------CBF                                                                        --------->ATHB12                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                     <---------YAB1                 -------->ATHB1                                   --------->YAB1                   --------->YAB1                                  <---------YAB1      <---------YAB1<--------HAHB4                           <----------DOF2         --------->ICU4   <---------ICU4           <---------WOX13(1) <-----------TBP   --------->AHL20(2)  --------->ATHB12          <------------CBF <---------DAG2       <---------AHL20(2) --------->ICU4   --------->YAB1      --------->ZAT14  <---------TOE2(3)         --------->GLK1(2) --------GT1     <-----------GT1--------->YAB1 --------->AHL20(2)--------->YAB1 ->GT1---------->DOF2  <---------ZAT14<---------AHL20(2) ------->TEIL--------->TOE2(3)   ttctatcaaaaagattgattttctgtatacttttttataataaatgttataaaattatgaatttcaagaatcattaattgagaattttaaaatttgatga  17763600                  <---------YAB1                --------->YAB1                -------->HAHB4                <---------ICU4             <---------ICU4             --------->YAB1             -------->HAHB4             <--------HAHB4             --------->ATHB51             <--------ATHB1            <---------ATHB51            --------->ICU4            --------->AHL20(2)            <---------YAB1                           <------ZmHOX2a(1)         >>>>>>>>>GT-1                     <------------CBF                     --------->ZAT6      ----------->GT1            --------->YAB1<---------ANAC58             <---------MYB59      <---------MYB46(3)        >>>>>>>>>MYB98 <---------ANAC58            <---------At4g35610   <------------CBF       ----------->GT1 <---------ICU4                   --------->At4g35610 <---------YAB1--------->ICU4  <-----------GT1 <---------AtLEC2          --------->ZAT18      -------   actactattggttaataattatgagaaatagtttaacataacaaatattgcatgaggactctaactgagttaatgtgagctaactctagctatactacaa  17763700                                                                                 ------------>CBF                                                                                <-----------GT1                                                                              <---------AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)                                                                          --------->ICU4                 <---------ANAC58                                    --------->ANAC55(2)                 <---------ANAC58                             --------------->AGL15            <---------AHL20(2)                    --------->At4g35610<---------ANAC55(2)         <---------ARR11(3)                 <---------ANAC58  <---------------AGL15       ----------->ARR10                  <---------YAB1     ----------------->AGL2                --       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ANAC58 ----------------->AGL3           <------ ---->TBP--------->ARR11(3)      ----------->GT1  <---------At4g35610----------->GT1   <-----------GT1   atgcctacttagattttatgggtgcaaaaccaagagagaaaaatatgcttgcagctaatataaaccaaaataagtaatattttaacaattttctgtcttt  17763800                                                                                                   <-                                                                                                  ---                                                                                                <----                                                                                                -----                                                                                                <----                                                        ----------->HVH21                      <-----                                                       <-----------HVH21                       <-----                                                      --------->ANAC58                         <-----                                         <---------ANAC58                 <---------YAB1      -------                                       --------->ARR14(2)            --------->YAB1--------->ANAC55(2)        <---------YAB1                 <---------ARR14(2)     <---------ANAC46     <---------ANAC55(2)        <---------ATHB12        <-----------GT1       --------->ANAC46  --------->YAB1        <------ ---->ZmHOX2a(1)       --------->GLK1(2) <---------ANAC58    <---------ZAT2       <---------LBD16<--- ----DOF2--------->ATHB12    <---------ZAT6           --------->ANAC58 <---------YAB1       <--------   cctccctctaatgagtgattttgagaatatagtattacccagttcttgcgactcacaagtcacagcttgtattatcatggttcttacggattagggccgt  17763900           <---------GLK1(1)           <----------TaMYB80           --------->GLK1(1)           --------->KAN4(1)          --------->ARR11(3)          <---------ARR11(3)      --------->HSFB2a(2)      <---------HSFB2a(2)  <----------DOF2 -----NtERF2 --->NtERF2<---------KAN4(1) -----MYB52(1)                                                                    <---------HSFC1(2) ---->ATERF1(1)          <-----------GT1                                          --------->HSFC1(2) --NtERF2 <---------ARR14(2)                                                  --------->ANAC58 ----ATERF1(1)        <---------AHL20(2)                                      --------->ANAC58 ------HVH21        <---------YAB1      ----------->GT1                       --------->ANAC46 ----SPL7 --------->ARR14(2)--------->TOE2(3)                               --------->YAB1 -->DEAR3(1) --------->GLK1(2)    --------->YAB1                            <---------ICU4 ---DEAR3(1)--------->KAN4(2)------>ZmHOX2a(1) <---------ICU4              <---------ATHB12         < ------DEAR3(1) <----------DOF2   <---------AHL20(2)<---------ANAC58   <---------AHL20(2)         <-- -ZAT18  <------ZmHOX2a(1)  --------------->AGL15   <---------ANAC58   --------->AHL20(2)    <-------   cggcctttctaggatattctttattattttccttatttataagggttaataagggcctgttcttgaactggattttaatcaagacacttccacttatgtt  17764000       --------->LBD16      --------->ANAC55(2)                                                                  <---------ANAC58      <---------ANAC58          ----------->HVH21                                       <---------WOX13(1)      <---------ANAC58          --------->WRKY12                                      --------->ATHB12      <---------ANAC55(1)    <-----------GT1                                         --------->ICU4 ----------DOF2 <------ZmHOX2a(2)                       <---------HSFB2a(1)          <---------YAB1 -------ANAC46 <---------ARR11(3)                 <---------LBD16            --------->DAG2<---------ANAC58 ----RAV1(1)   --------->ARR11(3)            <---------MYB52(1)     ------->TEIL  ------------>ATHB5   gcctttatccgtgttaagatcagacttgtattcactgaccgccttcggttttttcggagagttcgttttgaatctagagaaggtgctatgattgggtttg  17764100                                                 --------->ANAC55(2)                               --                  --------->GLK1(1)              --------->ANAC55(1)                       --------->ICU4                  --------->CCA1(2)              <---------ANAC55(2)         ----------->RAV1(2) <---                 --------->ARR14(2)              --------->ANAC46            <---------At4g35610<----                 <---------ARR14(2)              --------->ANAC58      ---------->DOF2     <---------YAB1                <------ZmHOX2a(1)    <---------CCA1(2)              --------->YAB1       <---------ICU4              <---------TOE1(2)    <---------ANAC58                 --------->TOE2(3)   <---------YAB1       --------->HSFB2a(1)         <---------ANAC58     --------->MYB52(1)  ------->TEIL--------->ICU4       --------->HSFC1(2)    <-----------RAV1(1) --------->ANAC58<----------DOF2      --------->YAB1       <---------HSFB2a(1)<---------ICU4    --------->YAB1 ------->GAMYB  <---------ZAT18--------->YAB1       <---------HSFC1(2)--------->ICU4     <---------ICU4<------------AtMYB77       <-------TEIL<---   agtatgagaagcttcgaaggatatgtactaattgttgtcgtatcactcatcacgtaaacaactgtccctttcttaatgcacctgtgattcatgatgatga  17764200                                     <---------At4g35610                                  --------->At4g35610                                  <---------At4g35610            <---------REM1(1)  <---------HSFC1(2)           --------------->AtSPL8--------->ALFIN1      <-------TEIL             <---------HSFB2a(1)  --------------->AtSPL3       <------MYB83 ------->ALFIN1                <------MYB46(1)                                                   ---- ------bZIP60(2)               --------->HSFB2a(1) --------->ZAT6                                ---- -----AtMYB61   ----------------->AGL1            <---------YAB1  --------->At4g35610<---------ZAT14 ------ANAC46  ------->TEIL <------ZmHOX2a(1)--------->ZAT6       <---------At4g35610--------->ZAT14   ggtggaggtacttgatgtacctgtttgggaggaaggtgctgcttctaacactatcactgatcaaactcatatgactagctcagacagttcagacatctcc  17764300  Previous    Next  AGI:  At1g48095.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G36960.1) Range:  from: 17763811    to: 17765667    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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