Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->At4g35610                          --------->At4g35610                          --------->ZAT2 <---------At4g35610                          <---------At4g35610    <----------DOF2            ------>ZmHOX2a(1)  ------           --------->At4g35610   --------->MYB46(3)      <-------TEIL     ----------->RAV1(2)  <-----      --------->ANAC46------->TEIL      ----------->RAV1(1)               <---------LBD16   ---------   atctcttcacatcatctaaacatgtatcagctccatccaatgcagcagaaactttcatgttcatccccataccatctcctgaagctaaatgctcaaaagc  17720100                                                 --------->At4g35610                                                 <---------At4g35610                                                --------->ANAC58                                                --------->ANAC58                                          <---------ANAC46                                        <---------WRKY18(1) ------>ZmHOX2a(1)                     ----------->HVH21                            --------->YAB1 --->HSFC1(2)     <---------ZAT18  --------->ANAC58                        ------>ZmHOX2a(1)        < ----HSFC1(2) <---------ATHB12     --------->ANAC46                  <---------ATERF1(1)         ---- ->DOF2--------->GLK1(1)           --------->ANAC58                 <---------WRKY38(1) --------->ATHB12   ttcctcgaggtttccaatcgcgctctcgtattcatctacgcatgacctgtaagctaacttagatcgagggtcgactcctccatcgataatagattggagt  17720200                                                                                         <------ZmHOX2a(1)                                                                                       <---------TOE2(3)    <---------TOE1(3)     <---------ANAC46                                      --------->ANAC55(2)    <---------TOE2(3) <---------ANAC46                                          <---------ANAC55(2)   <---------DOF5.7(2)<---------ANAC58                                          <---------ANAC46 --------->DOF5.7(2)  <---------ANAC58                 <---------ANAC58         <---------ANAC58 ----------DOF2--------->At4g35610      <---------AtMYB61                       <---------ANAC58 ----->GLK1(2) <---------At4g35610    --------->ALFIN1 <---------ANAC58     <---------ARR14(2)   ttctttaacgtttgtgtagctctcgcttgtgtagaatcaagtgtggtttttgccaaggcttgaagattaggcgatgcgaatttcgtattgaggaacttaa  17720300                                                                        <------ZmHOX2a(2)                                                              --------->YAB1                                                         <---------ANAC55(2)                                                         <---------ANAC55(1)                                                         --------->ANAC55(2)                                                         <---------ANAC58                                                         <---------ANAC58               <---------TOE1(3)  <---------At4g35610    <---------ANAC46               <---------TOE2(3)  <---------ZAT18     <---------WOX13(1)<---------ATHB12           --           <----------DOF2   <---------GLK1(2)      --------->ATHB12--------->DEAR3(2)             --  ---------->DOF2     <-----------HVH21            <---------YAB1  ------->TEIL       --------->TOE1(2)   gacagaaagatggatttaaggttttgtcacagattgtgctcatttctgaacttgtgattgcgtatgatgaaccgatcaagagaagaaacatgagagaaga  17720400                         ------>NtERF2                    <-------TEIL                  --------->ARR11(1)                                                          -------                  <---------GLK1(2)                                                          <-------                  <---------ARR14(2)                                                     ------------              ------>ZmHOX2a(1)                                                         --------->ANAC58             --------->TOE2(3)                                                          --------->ANAC46             <---------ANAC46                                                           --------->ANAC58   --------->ANAC58--------->CCA1(2)                                           --------->YAB1--------   --------->ANAC58--------->ARR14(1)                                          --------->AHL20(2) ------->ANAC58   --------->ARR14(2)                                         *TSS     ---------->DOF2 ------->ANAC58 ----------->ARR10                                            --------->AHL20(2)    <-   caagaacgcattgttccttagattcgcagccattcttgttttctctagtaattttagtttttccaagtttgtggtagaaaataatattcaaagcaatgag  17720500                         --------->ANAC58                  <---------ANAC58                  <---------ANAC46                  --------->ANAC55(2)                  <---------ANAC55(2) <---------AHL20(2)  <-------TEIL                                                      <------------- --------->AHL20(2)  --------->SPL7                                                    -------------- -->YAB1          <---------ANAC58                                                    <---------YAB1 --ATHB12        --------------->AtSPL3                                              >>>>>>>>>>>>>>>> >CBF            <---------------AtSPL8                                             <-----------GT1 ->ICU4  ----------->GT1 --------->ANAC58                                    --------->DAG2 ----------TBP  <-----------GT1             --------->GLK1(2)               ---------->DOF2   tatttatattagagtaatttacgtacaacgcattagtcaaaaacagaatcaagaatagaagttgacatgaacgatgaaaaaagtttttaccattgttaga  17720600                         --------->TOE2(3)                        <--------HAHB4                        --------->ATHB12                        <---------ICU4                         --------->YAB1                        --------->YAB1                         <---------ICU4                       --------->ICU4                         --------->ICU4     <---------AHL20(2)  ----------->GT1    --------->YAB1                 ------->TEIL     <---------At4g35610 --AGL15      --------->ZAT14                   <---------------AtSPL8          --------->AHL20(2) ->AGL15      <---------ZAT14   --------->YAB1  --------------->AtSPL8    <---------WOX13(1) >LFY   --------->YAB1 <---------YAB1 --------->TOE2(3)       <---------ATHB12  <---------AHL20(2)   agaattgcaaatatagtatacagttatcattagatgataacatcaaattgtatgtacttatctaatcatggagctaattgaattaattttggtctcttag  17720700                            <---------TOE2(3)                            <---------TOE1(3)                           <-----------GT1                         <---------YAB1                       -------->HAHB4                       --------->YAB1                       <--------HAHB4                       -------->ATHB1                       --------->ATHB51                       <---------ICU4                      <---------YAB1                                                        ---------                      <---------ATHB51                                                      ---------                      <---------ATHB12                                                    <------NtERF2                      --------->ICU4                                                     --------->LBD16             <---------ARR14(2)                                                        <---------LBD16             --------->ARR14(2)                                                      --------->ANAC58            <---------GLK1(1)       --------->At4g35610                              --------->ANAC58            <----------TaMYB80--------->TOE2(2)             <---------ANAC46     --------->ANAC58   -            <---------CCA1(2) --------->TOE1(2)  <---------DAG2                  --------->ANAC58 ---           ------->TEIL<---------AHL20(2)    <---------ATHB12 <---------ZAT6   ---------->DOF2    ---   tgaatgcataatgtatatcccctaattattaacgtatgaactgactaatcaatttttgggtttagtgtaaaccaaaaactagaaagcaagccggaagcaa  17720800                                                              <---------DOF5.7(2)                                                              --------->MYB52(1)                                                   <-----------ARR10                                                   --------->GLK1(2)                                    <------ZmHOX2a(2)       --------->DOF5.7(2)                                   <---------ARR11(3)      --------->TOE2(3)                                   ----------------------->TaNAC69(2)                                   --------->ARR11(3)      --------->TOE1(3)                               ---------->DOF2     <---------ARR14(2)                             <---------YAB1        --------->ARR14(2)         <---------ANAC58 <---------AHL20(2)       ------->TEIL<---------TOE2(3)    --------->ALFIN1      <---------AHL20(1)      <---------CCA1(2) --------->DAG2        <---------AHL20(1)       <---------ANAC55(2) >ANAC58 <---------ANAC58 --------->AHL20(2)    --------->ANAC55(1) >ANAC58 <---------ANAC46 --------->AHL20(1)    --------->ANAC46                      <------ZmHOX2a(1) --------->DOF2        --------->ARR11(3)       --------->ANAC58                  ---------->DOF2 ------>YAB1           --------->AHL20(1)       --------->ANAC58             ----------->GT1 ------>AHL20(2)       <---------ARR11(3)       --------->ANAC55(2)  --------->YAB1  <----------ID1   taaaaagtgttgagtgaatgttgaatattttattaaagatcaggcttaacacgtatctgaacattaacgaataaaaacacagtataaaggacaaattgaa  17720900                                                                                            ---------                                                        <---------YAB1                    <---------ANAC46                                                    <---------ANAC58                      --------->ALFIN1                                         --------->CCA1(2)                                <----------                                        <---------ARR11(3)         <---------ZAT18     ------>ZmHOX2a(1)                 ------>MYB46(1)      <---------TOE2(3)<-----------HVH21        --------->ARR11(3)                 ------>MYB83------>MYB46(1)        <---------ANAC58          <---------TOE2(3)               <---------MYB59 <-----------RAV1(2)  <---------ANAC46      <----------DOF2 <---------ZAT6     ----------->RAV1(1)     ------>MYB83--------->GLK1(1)       <------NtERF2<---------TOE1(3)  ----    --------->MYB46(3)       -------->P --------->ARR11(3)     --------->ALFIN1 <---------ARR11(3) <-   ggctaaaccacagaaaaccgaaccaaaatccaaccaggttaagatatcgatttggcttgtcataggtggctcactcctttaaggtcttcctagtgtggga  17721000  Previous    Next  AGI:  At1g48020.1    Description:  invertase/pectin methylesterase inhibitor family protein. Identical to Pectinmethylesterase inhibitor 1 precursor (PMEI1) [Arabidopsis Thaliana] (GB:Q9LNF2); similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G17220.1); similar to Pectinesterase inhibitor precursor (Pectin methylesterase inhibitor) (PMEI) (AdPMEI) (GB:P83326); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 17719720    to: 17720477    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g48030.1    Description:  dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1). Identical to Dihydrolipoyl dehydrogenase 1, mitochondrial precursor (LPD1) [Arabidopsis Thaliana] (GB:Q9M5K3;GB:Q9LNF3); similar to LPD2 (LIPOAMIDE DEHYDROGENASE 2), FAD binding / dihydrolipoyl dehydrogenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G17240.1); similar to LPD2 (LIPOAMIDE DEHYDROGENASE 2), FAD binding / dihydrolipoyl dehydrogenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G17240.3); similar to dihydrolipoamide dehydrogenase precursor [Bruguiera gymnorrhiza] (GB:BAB44156.1); similar to mitochondrial lipoamide dehydrogenase [Populus Range:  from: 17720808    to: 17722810    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version