Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <----------DOF2                                                                        --------->TOE2(3)                                                                     ------>MYB46(1)                                                                     ------>MYB83          <--------ATHB1                                                                   XXXXXXXXXXXXXXXXXXXX>MIR839                                                       --------->GLK1(2)--------->TOE1(3)  --------->YAB1                                                       --------->ARR14(2)  <-----------GT1<---------YAB1                                                       <---------ARR14(2)--------->DOF5.7(2)                                                  ---------->DOF2  <---------MYB46(2)     <---------ATHB12 ----->DAG2                --------->MYB52(1)<---------------AGL15 <---------MYB59    <---------ATHB12 ----->DOF2  ----------->GT1              ----------->HVH21------>ZmHOX2a(1)    --------->AtLEC2   <-   aagtttcagtctaaatgtttaaaaaacaaaaacggactacttgtttgacatataaagaatccttcaataccaaactttaaccattcaaatcaatgatagt  17709700                                             --------->YAB1                                             <---------ICU4                   --------->ANAC58                                            --------->ICU4                    --------->ANAC46     <-                  <---------YAB1    <---------ARR14(2)                        --------->ANAC55(2)  --                --------->CCA1(2)   --------->ARR14(2)       ------>ZmHOX2a(2)--------->ANAC58 ------               --------->ARR11(3)  <------ZmHOX2a(1)        --------->At4g35610           --------->AHL20(2)    <---------ATHB12               =================================HOX2a_HOX2a      --------->ANAC55(2)  --------->WOX13(1) --------->CCA1(2)      <---------YAB1  <---------At4g35610      <---------ANAC55(2) ----------GT1 <---------ARR11(3)<---------TOE2(3)         <---------AGP1   <-----------GT1<---------AHL20(2)   ttaacaatcactctagagatatgatatgggcatataaggatttgttatgatgacttcaattgatctgaatcgatcgatttacgcattacatattatatat  17709800            <---------GLK1(2)         <---------ANAC55(2)         --------->ANAC55(2) <---------AtLEC2       <---------AHL20(2)          <---------At4g35610 --------->YAB1       <---------AHL20(2)            --------->At4g35610 --------YAB1         --------->AHL20(2)            --------->ZAT2                  <---------At5g28300 ------->AtLEC2 <---------ANAC46  --------->DAG2-------->P           <---------GLK1(1) --->ARR11(3)--------->GLK1(2)  ---------->DOF2<-----------GT1       --------->GLK1(1)   --------->REM1(2)   catgcatgatcacatattctgtatatatatatgcaaaaggcttaagaagttaccagcagaacgagagagggagttccatcttccttcaccgtgaagagaa  17709900            <----------DOF2     --------->MYB52(1)    ------->GAMYB    ----------->HVH21   <---------MYB52(2)                         ------>ZmHOX2a(1)                               -------   <------------AtMYB77                 --------->AtMYB61      <----------DOF2               <------- ------->TEIL<-------TEIL             ------->TEIL<-----------GT1    --------->HSFB2a(2) <----------DOF2   atgtaactgacgagcttcatgtcttcttccacagtccatggacctctccttatttctatttccatctttttctcgacttcttcgacttcttctttatgat  17710000                                                                                                -----                                                                                                <----                                                                                            <--------                                                                                            <--------                                                                                            ---------                     --------->ARR14(2)                                                    <---------AHL20(2)                     <---------ARR14(2)             --------->GLK1(2)                      --------->AHL20(2) -->ATHB12<---------At5g28300                <----------DOF2                            --------->ARR11(3) --YAB1  <-----------GT1               <-------TEIL<---------GLK1(2)                    <---------ARR11(3)   ttataagggttttacagtttgcgaattctgttctacttatattcatgctttgagattcttagaaacttgtgagaagattgctctgagaaagattttaatt  17710100                                                                                              -------                                                             <---------RVE1(1)                <------                                                            <---------GLK1(2)             <---------YAB1                                                            <---------ARR11(3)            -----------                                                  <------MYB83 <---------AHL20(2)       --------->YAB1 ---->AHL20(2)              --------->DAG2        <------MYB46(1)                      <---------YAB1 -----AHL20(2)             ---------->DOF2       <---------MYB46(3)                    <---------AHL20(2) -AHL20(2)    <---------LBD16*TSS               --------->ALFIN1                    <---------ARR11(3) -YAB1        <---------HSFB2a(2)          <---------LBD16  --------->ARR11(3)      --------->AHL20(1) >AHL20(2)    --------->HSFB2a(2)  ------>ZmHOX2a(2) <-----------TBP           <---------ANAC46   aatgagggagagagttctcggaatggacataaagtgatcgagttttcagggtgggttttatagatttttttttgttttgttttgtatatattataaataa  17710200                                               --------->ARR11(3)                                               <---------ARR14(2)                                               <---------ARR11(3)                                           --------->LBD16                                          --------->ANAC46                <---------ICU4                                         <---------HSFB2a(2)              <--------ATHB1                                         --------->HSFB2a(2)              --------->AHL20(2)                                      <-----------GT1                     --------->ATHB51                                   <---------ICU4                         <---------AHL20(2)    <---------ATHB12               --------->ATHB51                      --------->ICU4   --------->ANAC58               --------->AHL20(2)       <---------HSFC1(2)   ------>MYB83                   <---------ATHB51         <---------HSFB2a(1)   --------->ANAC58               --------->ICU4--------->CCA1(2)        <---------YAB1   ------>MYB46(1)                <---------AHL20(2)       --------->HSFB2a(1) -->AHL20(2)                   --------->AHL20(2)          --------->HSFC1(2) ---AHL20(2)                 >>>>>>>>>GATA-1 ----------->ARR10         --------->YAB1             <-- >TBP               ----------->GT1-------->ATHB1 <---------YAB1     --------->AHL20(2)           ---   ataccaagcatttgaaatcggcatgttaatagataaattattacccgaagatattagtggaattttcgcaaaataataatttctaagtaatagtataaga  17710300                     --------->ANAC58                     --------->ANAC58                    <-------PIF5                    <-------MYC3                    <-------MYC2                    ------->MYC3                    ------->MYC2                                                               <-----                    ------->PIF4                                                               ------                    <-------PIF4                   --------->ANAC58                           -------             ---------->DOF2                       <---------ANAC55(2)   ----------->GT1--------->YAB1            ------>ZmHOX2a(1)                      --------->ANAC58------->GAMYB<---------AHL20(2) -------ARR11(3)    ------->PIF5           --------->ANAC58     --------->MYB52(1)    <-----------GT1 ------>ARR11(3)    <-------MYC4           --------->ANAC58---------->DOF2      --------->AHL20(2)  <   gttcttagtttctccttaagcacatgctatagttaagagttggataagctatcaagtaagtaaaagtaaccgaagaagtaatttaaattaacatcattta  17710400                                   <-----------GT1                                   <-----------GT1       <---------AHL20(2)      <----------DOF2                                 --------->AHL20(2)      --------->AHL20(2)       <---------DAG2                           --------->GLK1(1) ----AHL20(2)            ------->GAMYB                               <---------TOE2(3)    ------>MYB83 --->AHL20(2)           <---------MYB52(2)                     <---------YAB1<----------DOF2        < -->AHL20(2)            --------->MYB46(3)     --------->AHL20(2)    <---------TOE1(3)    ------>MYB46(1) -----------GT1       ----------->RAV1(1)      <---------AHL20(2)   <-----------RAV1(2) <---------MYB59   tttatcgatataatttagttgatgcaacaaacccttttttctgtagtatataattttgtttagttttgattcaggtttccttttattaaaccaaactaga  17710500                   ----------->HVH21                                                               --                 --------->ANAC46         --------->TOE2(3)                                        <-                 <---------ANAC55(2)      --------->YAB1                                           <-                 --------->ANAC58         --------->TOE1(3)                             --------->WOX13(1)           --------->AHL20(2)           <---------ARR11(3)                          ----------->GT1--    ------->GAMYB--------->ANAC55(2)--------->ANAC46                         <---------YAB1     ----- <-----------GT1 --------->ANAC58   --------->ANAC55(2)                 <---------AHL20(2)     ------ -----------GT1 <---------LBD16   <-----------GT1       <---------ZAT6 --------->AHL20(2)  --------->AHL20(2)   atttaaccctcaatataacacgggacaattttgttttcacataatcttaactaaattagtgtaattctacatatttaatattagtgatgttaatcaaata  17710600  Previous    Next  AGI:  At1g48000.1    Description:  MYB112 (myb domain protein 112); DNA binding / transcription factor. similar to AtMYB78 (myb domain protein 78), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G49620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63179.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44955.1); similar to hypothetical protein OsJ_010196 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26713.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro Range:  from: 17707848    to: 17710129    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version