Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ------->GAMYB                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    --------->MYB52(1)                 <---------ALFIN1                 --------->AtMYB61                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                               -                --------->ANAC46                                                                    <               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                   <              --------->ANAC46                                                    <----------DOF2  --              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --           <---------ARR14(2)          <----------DOF2    <---------MYB59      ------->TEIL        --      ----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(i)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <--- ->GAMYB<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            -------->P   <---------ARR11(3)          ---- >MYB52(1) <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---------->DOF2         --------->ARR11(3)         ----- -DOF5.7(2)--------->ARR14(2)   <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxsmallRNA(i)       -----   acagaaactagtaaatccaccacaacggagagcaactcttcctttcacaaagaaaaactacctcactgagagaacttaatgcatctttcacaaatagaac  17690500   <---------ALFIN1 --------->AtMYB61                                     <---------ARR14(2) ------->GAMYB                                      ----------->GT1 -------->MYB46(3)                                  <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                <---------ANAC58 ---------MYB55(2)                             --------->ATHB51 ------>P                                      --------->ATHB12                    xxxxxxxxxxxxxxxxxx ---->MYB46(1)                                 -------->ATHB1              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ---->MYB83            <---------ANAC58       --------->ICU4              ------>MYB83 ------MYB111(1)       <---------ANAC46       <---------YAB1              ------>MYB46(1) ----->AtMYB61         <---------ANAC58      <----------DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ---->DEAR3(2)       <-----------GT1        ----------------->AGL1      <---------MYB59 ---->MYB46(3)  <---------AHL20(2)<---------MYB59   <---------ANAC58 <-----------GT1xxxxxxxxxxxxxxxxx   caaccacacattatttgttttattttcgtgtttgggcctaacaatggcattattgggtatattgagctatattaccaacttacaatctattgggccttaa  17690600                                                                                  <-------MYC2                                                                                  ------->PIF5                                                                                  <-------MYC4                                                                                  ------->MYC2                                                                                  <-------PIF4                                                                                  <-------PIF5                                                                                  ------->MYC4                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                                 ====================                  <---------AHL20(2)                                             --------->O2                 --------->YAB1                                                  <---------O2          <---------ANAC58                                                       --------->TGA1a          <---------ANAC46                                                --------->ANAC58          <---------ANAC58                                                --------->ANAC46         <---------MYB46(3)                                     <---------ICU4   <---------TGA1a   --------------->AGL15                                        <---------AHL20(2)------->PIF4   <---------------AGL15                                        -------->HAHB4  ------------>OsbHLH66  ----------------->AGL1              ----------->GT1          --------->ICU4--------->RAP2.6(2)  <-----------------AGL2              <----------ID1           <---------YAB1--------->DEAR3(1)  ----------------->AG               ----------->GT1           <---------ATHB51<------------OsbHLH66  =============================================MADS_MADS    --------->AHL20(2) <---------ALFIN1 xxxxx>smallRNA(s2)                ---------->DOF2          <---------AHL20(2)<---------SPL7 xxxxx>smallRNA(i2)            <---------------AGL15  ----------->GT1     --------->ANAC58   atatgccatattgggtgtataaaaatcgaatttttaaaaaaggaaaaaaacttgaacggtttttaattattcgcacaagccgcacgtgtgattctcatga  17690700                                                           <---------ANAC58                                                           <---------ANAC58                                                  ------>NtERF2                                       <----------DOF2--------->ALFIN1                                     --------->At4g35610  --------->ZAT2                                     <---------At4g35610  <---------At4g35610                            -------->HAHB4        <---------At4g35610                            --------->YAB1        --------->At4g35610                            <--------HAHB4       --------->DEAR3(1)                            --------->ATHB51     --------->RAP2.3(2)                            <---------ICU4      <------NtERF2                            <---------AHL20(2)  --------->RAP2.3(1)                            -------->ATHB1     ------>NtERF2                           <---------YAB1      <------NtERF2          <----------ID1   <---------ATHB51    <---------ATERF1(1)         ----------->GT1<---------AHL20(2)    <---------ATERF1(1)        --------->DAG2  --------->AHL20(2)    --------->ANAC58            <-----------GT1        <---------------AtSPL8<---------YAB1  <---------ALFIN1        <----------DOF2       ---------->DOF2 --------->AHL20(2)     --------->ANAC58   <------NtERF2 =================bZIP_DOF --------->ICU4     --------->ANAC46<---------LBD16  <---------MYB52(1)   aaaaacaaaaaaagtacaaataacatttaattattattcagctttggcccgccgctgtggagcttgcggcatcttttaacccttactcatcaaaaccaca  17690800                                        ------>MYB46(1)                                        --------->ARR14(2)                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                  --------->TGA2(2)                                  ----------->HVH21                                 <-----------HVH21                                --------->bZIP60(1)                                --------->bZIP60(2)                                <---------bZIP60(1)                                <<<<<<<<<<HY5                                <---------TGA1a                                --------->ANAC55(2)                                <---------ANAC55(2)                                --------->ANAC46                                --------->ANAC58                                --------->ANAC55(1)                    <---------ARR14(2)                                --------->ANAC58                       --------->ARR14(2)                                --------->TGA1a                        <---------AGP1                                <---------O2                           <-----------ARR10                               ------>NtERF2          --------->AHL20(1)                               <-----------STF1       --------->AHL20(2)      --------->TOE2(3)                           --------->ANAC46           <---------AHL20(2) ------>ZmHOX2a(2)                           --------->ANAC58           <---------AHL20(1)<------ZmHOX2a(2)                           --------->ANAC58 ------>ZmHOX2a(1)          --------->ARR11(3)                      <------ZmHOX2a(2) <---------ARR14(2)            <---------CCA1(2)                      =============================HOX2a_HOX2a     <-------TEIL  ---------->DOF2                  --------->SPL7--------->O2===================================HOX2a_HOX2a         --                <-----------HVH21<-----------TGA1    <---------AHL20(2)<---------ARR11(3)          <-                <---------SPL7<---------ALFIN1<-----------HVH21   <-----------HVH21   ---------------        =====================HOX2a_HOX2a------>MYB83 --------->AHL20(2)--------->AGP1 <--------------        ------>ZmHOX2a(1)--------->MYB52(1) ====================================HOX2a_HOX2a    <-----   ttgttctatcctctaaaccgtccgatctaacgccacgtcacctatcctcgtcaaattaaatttcaacggttcagatctaatctcaaagacggtactgctt  17690900                                                                                              <------                                                                                              <------                                                                             --------->ARR11(3)  <---             <---------HSFC1(2)                                              <---------ARR11(3)  ----             <---------HSFB2a(1)                                             --------->GLK1(2)<------ ------------>CBF                                                       --------->LBD16      <------- ------->At4g35610                                 <------ZmHOX2a(1)   <---------HSFB2a(2)   <------- --------At4g35610 <-----------GT1               --------->LBD16       --------->HSFB2a(2) <--------- >AtSPL3     --------->HSFB2a(1)                <---------LBD16       <---------LBD16  <----------DOF2 -AtSPL3     --------->HSFC1(2)       *TSS<---------GLK1(2)          <---------LBD16   <---------DAG2 ------HVH21------->TEIL           ------>ZmHOX2a(1)            <----------DOF2     <-----------GT1   cagctcaatagtcgaaccttctaacccttctctcttcctctaaaaattctccaggaaaatcgaaaacttttctcgggaaaatctttaaactttttgcttt  17691000                               --------->YAB1                            --------->YAB1                           --------->ICU4                           <---------YAB1                        <---------YAB1      --------->YAB1    --------->ICU4 ---DAG2<---------YAB1-------->HAHB4 ---------AGL15       <---------ICU4 ------HSFB2a(2)      --------->YAB1 ----->HSFB2a(2)     --------->ICU4 ----DOF2            <---------ATHB12<---------ARR11(3)     <-------TEIL --ANAC58      <---------ZAT6 <---------YAB1      <---------ARR14(2)       --------->DEAR3(1) --ANAC58--------->ATHB12--------->YAB1    ---------->DOF2 --------->CCA1(2) --GT1<---------ICU4<---------TOE2(3)--------->ARR11(3)    --------->GLK1(2)------>NtERF2           -   tcgaagaaacatgactggtgttaatgatgatgatgataagaacttcaaagaagaaccagagattcaagttttaagcgacgacgatagtgatgaagaacaa  17691100                                                                 --------->ICU4                                                               --------->YAB1                                                              <---------YAB1                                                              --------->ICU4                                                            --------->YAB1                                               ----------->HVH21 <---------YAB1       ----------->TGA1         <------MYB46(1)              --------->ICU4       --------->ICU4           --------->At4g35610         <------MYB83               --------->YAB1         <---------YAB1      >>>>>>>>>TBF1       --        <---------TOE2(2)          --------->ICU4       --------->ICU4      >>>>>>>>>TBF1         --- --------->DOF2        <----------ID1 <---------YAB1<------ZmHOX2a(1)   <------ZmHOX2a(1)   ---------   gttaaagacgtaggtgaagaagttagcgacgaagacgatgatgatggaagtgaaggagatgatgatgatgatgaggaagaagaagaagatgacgatgacg  17691200         <---------TOE2(3)         ----------->RAV1(2)         <---------TOE1(3)        ------>ZmHOX2a(1)  --------->At4g35610                            - <---------YAB1          <---------AtMYB61     <---------At4g35610                                  < ------->YAB1         <----------DOF2------>ZmHOX2a(1)                                            --- ------>ICU4--------->ARR14(2) --------->PCF5  --------->At4g35610                               ---- -->TGA1<-----------RAV1(2) --------->ALFIN1   <---------LBD16                             ----------   atgatgatgttcaggttttgcagtctttaggtggtcctcctgtacaatcagcggaagatgaagatgaagaaggtgatgaagatgggaacggtgatgacga  17691300                                                                                                 <---                     ----------->TGA1                                                            ----                   <---------ICU4                                                                <---   <---------YAB1  --------->YAB1                                                               <----   --------->ICU4 <---------YAB1        <------ZmHOX2a(1)                                       <---- --------->YAB1   --------->ICU4      <---------TOE2(3)     ----------->GT1                   <------ -------->ICU4  --------->YAB1   <---------YAB1            <---------TOE2(3)       <-----------GT1  - ---------YAB1 --------->ICU4    --------->ICU4--------->ARR11(3)   --------->AHL20(2)      <-------- ------>YAB1   <---------YAB1  --------->YAB1 <------ZmHOX2a(1)     <---------AHL20(2)      <-------- ----->ICU4 --------->ICU4    --------->ICU4<---------TOE2(3)      --------->AHL20(2)     <---------- ->TGA1   <---------At4g35610<XXXXXXXXXXXXXXXXXXXXMIR414   <---------------AtSPL8<---------AHL20(2)<-   tgatgatgatggagatgatgatgatgacgacgatgatgatgaggatgaggatgttgaagatgaggtaaaaaaaattttctgaatttatcaattttcgttc  17691400  Previous    Next  AGI:  At1g47970.1    Description:  unknown protein Range:  from: 17690938    to: 17692485    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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