Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->YAB1      <---------ANAC46                                                    <---------YAB1      <-------TEIL                                                   <---------AHL20(2)--------->HSFC1(2)                                                   --------->AHL20(2)<---------HSFC1(2)                                                  --------->YAB1<---------At4g35610                                         <---------ZAT18     <---------MYB52(1)               <-----------GT1          <---------ANAC58     --------->DOF5.7(2)         --------->YAB1                 <---------ANAC58   <---------MYB46(3)                 <------      --------->YAB1           ----------->GT1   <---------YAB1 --------->At4g35610  --------->DAG2     <------ZmHOX2a(2)    <---------AHL20(2) ------>ZmHOX2a(1) --------->MYB52(2)   ---------->DOF2   caggtcgatcatcaaaatcactctatagttaatgggttaatagcgtccttgattataatagtcgttagctaagcttcgttgagagaaaaagaggttttgt  17647200                                             --------->ICU4                                             <---------YAB1                                       --------->At4g35610                                       <---------At4g35610                                       <------NtERF2                                      <---------ATERF1(1)                                          <-        <---------ANAC55(2)          <---------DEAR3(1)                                         <----        --------->ANAC58          ------->GAMYB                          <---------REM1(2)    -------        --------->ANAC58       --------->MYB52(1)              --------->ANAC58       <---------ANAC46        --------->ANAC55(2)   <---------WRKY38(1)              --------->ANAC46       <---------ANAC58 ---ANAC46 --------->MYB52(1)--------->MYB46(3)                --------->ANAC58       <---------ANAC58   gagagatagaacgtaacgttttgtgatattagccaacgggcagcgtcaatattgagttttcaacctcgccaagtctacaagttttgtttcgtttttgtct  17647300                                                                                               <-----                                                                                               ------                                                                                      <-----------GT1                                                                                  <---------AHL20(2)                                                               <---------ICU4    <---------AHL20(1)       ---------->DOF2                                     <---------AHL20(2)    <---------AHL20(2)  <----------DOF2                                         --------->AHL20(2)     --------->AHL20(2) --------ARR11(3)                               <---------ETT(2)                 --------->AHL20(1)<- ------DOF2<---------ARR11(3)          <----------DOF2 <---------AHL20(2)       --------->AHL20(2) -- --->ID1   --------->ARR11(3)  <-----------GT1  --------->ETT(2)         ---------->DOF2 <----------DOF2   ttatcttttaaaagatgttgaaactacacatattaatctttctttttctgtctacatatatttaatcttggctcataaagaaattaattttctttataac  17647400                                             <---------MYB46(3)                                             <------MYB83                                             <------MYB46(1)                                        <---------TOE2(3)          --------->ANAC58          --------->YAB1          --------->ANAC58          <------------CBF     <---------ANAC46               <---------ICU4 <------------CBF                 --------->ICU4            <------------CBF       --------->ANAC58 ----------AtSPL8                 <---------YAB1   <---------TOE2(3)               --------->ANAC58 --------->AtSPL3            ----------->GT1<---------TOE2(2)                    ---------->DOF2  --- ------TEIL    --------->AtLEC2------------>CBF    <---------TOE1(3)        <---------ANAC46 -------- ----->TEIL------------>CBF---------->DOF2 <---------MYB52(1)          <------ZmHOX2a(1)    ---------   gtacattgtgggaagcaatgcaaattttgaaaagtcaatattgacgttggttttaggtttgaaattggctagaggacgacttggaaagcatttcatggaa  17647500                      --------->AHL20(2)                      <---------AHL20(2)                               --------->ATHB12           <---------ZAT18                                             <---------ICU4         <------         --------->ANAC46             --------->ANAC58                <---------YAB1        ---------         --------->ANAC58             --------->ANAC55(2)           --------->YAB1          ---------         --------->bZIP60(2)          --------->ANAC46           --------->YAB1             <--------       <---------ALFIN1            ------>ZmHOX2a(1)       <---------ANAC58                 <--------      <---------REM1(2)      <---------DAG2                <---------ANAC58                <---------AHL20(2) ------>AHL20(2)    <---------AHL20(2)--------->ANAC58 <----------DOF2--------->ICU4       --------->AHL20(2) --->GT1 --------->ANAC58 <-----------GT1          <-----------GT1  <---------ICU4--------->YAB1 >AtLEC2 --------->ANAC55(1) <----------DOF2 ------------>CBF <------------CBF   <---------YAB1   aaaaatgctacacggcacttatatttttttacttttcctcacgaaactccaattttcctttgcttattgataatgatttttctataattctaaataaatt  17647600        <----------DOF2                                                                         -----     <-----------GT1                                                          --------->ANAC58  <---- <----------DOF2                  ---------->DOF2                             --------->ANAC58 ------ ------CBF                       --------->YAB1                            <------NtERF2       ------ >AHL20(1)                   --------->AHL20(2)              --------->AHL20(2)                ------ >AHL20(2)                   <---------AHL20(2)            <----------DOF2--------->HSFB2a(2)  <----- -AHL20(1)              ------------>CBF        <---------DAG2            <---------HSFB2a(2)  <----- -AHL20(2)       ---------->DOF2<---------YAB1  <----------DOF2          <---------LBD16   ----------   gctcttttaactttccatcaaaagacttcaatttatcaaagtctatggaactttatgttttctttatatatgtagtcgggaagacacttcataaaaagat  17647700   --------->ZAT6 ---->CCA1(2)          <---------LBD16 --ZmHOX2a(2)      <---------YAB1 --->ARR11(3)    --------->YAB1 --->AGP1  <-----------GT1 --->ARR14(2)    <--------HAHB4                             --------->YAB1      <---------At4g35610 ----ARR14(2)   <---------YAB1                             ----------------->AGL3     ------>ZmHOX2a(1) ----ARR11(3)<---------YAB1                         ---------->DOF2             --------->At4g35610 >DOF2    --------->AHL20(2)    <----------DOF2 --------->YAB1       <---------ZAT6  --------->TOE2(3)   ccaaaacactaatttactattattattcggaaaactttgttttttcacaaatataaaagttttcatatttagtgagaaaatgagcttccttattcgttcc  17647800                                                    ----------->RAV1(1)                                                   --------->ANAC46                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                             <---------At4g35610                     <---------TOE1(2)       --------->At4g35610                    ------>ZmHOX2a(1)        --------->ZAT2              <---------ICU4                 <---------ZAT2             ------>ZmHOX2a(1)        --------->MYB52(2)             <---------YAB1           <---------MYB46(3)                  ---------->DOF2            --------->TOE2(3)       <---------MYB52(1)       <-----------HVH21<------ZmHOX2a(1)       ------>ZmHOX2a(1)          <---------ANAC55(2) <---------ALFIN1  --------->AtMYB61          --      --------->TOE2(3)        <---------ATHB12  --------->ANAC58   <---------ETT(1)      --------->ATHB12   atctgtttccttatcctcattcctagttttctaatcacgtttgtttcagctacgcaacacttgtgtcattccgaccaaaaggatgctcttcttgatttca  17647900                                                                      <-------MYC3                                                                      ------->MYC3                                                                     --------->TGA1a                                                                     <---------ANAC58                                                                     <---------TGA1a                                                                     <---------O2                                                                     --------->O2                                                                     <---------ANAC55(2)                                                                     <---------ANAC46                                                              ----------->GT1                                                              <------MYB83                                                       --------->TOE1(2)                         ----               <--------P  --------->ATHB12           --------->MYB52(2)                         ====               <---------WOX13(1)              <---------MYB46(3)    <---------ANAC58        --------              <-------GAMYB--------->YAB1     <---------WOX13(1)     --------->ANAC55(2)   --------->ANAC55(2)             <---------MYB46(3)               <---------YAB1  <------MYB46(1)              <---------ANAC55(2)             ----------->GT1            --------->DAG2<---------ANAC58<-------MYC2    <------NtERF2             <------MYB46(1)           ========================================bZIP_DOF   <----------            <---------AtMYB61          ---------->DOF2<---------ANAC58------->MYC2   <---------HSFB2a(2) ------->YAB1<------MYB83  <---------ICU4   --------->ATHB12 <---------AtMYB61      <---------LBD16   agaatgagtttgggatggttgattcaaaatcatgggtgaacaaaagtgattgttgttcgtgggatggtatcacgtgtgatgctaagtcgggaaacgtgat  17648000                                                                               ------>ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                           <---------MYB52(1)                                                                          --------->LBD16       --------->TOE2(3)         --------->ZAT2                         <---------LBD16     <---------ARR11(3)          <---------At4g35610                  <xxxxxxxxxxxxxxxxsmallRNA(i) -->ZmHOX2a(2)                   --------->At4g35610                 <---------At4g35610 =============================HOX2a_HOX2a    --------->ZAT6      <-----------HVH21 --->HVH21             ------>ZmHOX2a(1)   ----------->RAV1(1)   <-----------TGA1 -------------TaNAC69(2)         <---------ZAT2      <----------DOF2 --------->At4g35610   cgggctagaccttagttctatcttcctctatggccagctcaaatccaacagtagtctttttaaactgcgtcatctccgtgatctaaacctcgctaacaac  17648100  Previous    Next  AGI:  At1g47890.1    Description:  disease resistance family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G45616.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66148.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 17647645    to: 17650704    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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