Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ICU4                  <----------DOF2    --------->ZAT6       --                           --------->ATHB12               <---------DAG2     ------->TEIL         <--    --------->YAB1         --------->YAB1       <---------YAB1    ---------->DOF2        <----------DOF2 ------>GT1              ------->TEIL     <-------TEIL <-----------GT1--------->ARR11(3) <---------DAG2   gaaaaatgataccagagaaacaaaatgaatcatgggtttagaaattcattctaatttctaccttttggcaaagaccatgaactctaaactactttttggt  17636800             --------->ARR14(2)            ------>MYB83<-------TEIL                 --------->TOE1(1)          <---------MYB59                   <---------At4g35610         ----------------->AGL2             --------->At4g35610         <-----------------AGL1           <-----------RAV1(2)         <-----------------AGL3      <-----------RAV1(1)         =====================================================================================MADS_MADS         ----------------->AGL1      =================RAV <---------YAB1      <---------MYB46(3)  <---------ZAT18                      <---------------AGL15 ------->YAB1<---------ARR14(2)   --------->ATHB12  <---------LBD16       --------->ZAT14         --- -------YAB1------>MYB46(1)   ----------->GT1    ------->TEIL  <------ZmHOX2a(1)              ------>NtERF2   atgataactggaccaaatttgggccgttcatagagtttattggtgcagatggacctcggagattaggactcccctgtaaactcaatctagcaatgccgag  17636900                                             --------->DAG2                    <---------DOF5.7(2)                                            ---------->DOF2                <---------ANAC55(2)                                         --------->YAB1                 --------->ARR14(2)               <---------ANAC58     --------->TOE2(3)                   <---------ARR11(3)               <---------ANAC46    --------->YAB1                       <---------ARR14(2)              <-------TEIL         <---------ICU4                       --------->ARR11(1)            --------->ARR11(1)     <--------HAHB4                 <---------HSFB2a(2)            <---------GLK1(2)     <------ZmHOX2a(2)               <---------HSFC1(1)----------->GT1       <---------AHL20(2)         <---------ATHB12  ---------->DOF2     --------->ARR11(3) --------->ICU4  --------->LBD16          ------->TEIL <---------TOE2(3)         --------->HSFB2a(2)      <---------YAB1 <---------ANAC46       <---------YAB1  <---------YAB1       ------->TEIL--------->CCA1(2)--------->TOE2(3) ------>GLK1(2)<---------ANAC58<---------ETT(2) <----------ID1 --------->ARR11(3)--------->ANAC46   actccgtatttatagattcgtgaaccatgaatgtcgatcattaacataaagctacaaagtatgaagctctagaagatatgtaaacgtcgtaacattatta  17637000                                                                                      <---------ANAC58                                                                                   <------NtERF2                                                                                  --------->LBD16                    --------->ANAC58                                             <---------DEAR3(1)                    --------->ANAC58   --------->MYB46(3)         --------->At4g35610 <---------ANAC58                    ------>MYB46(1)  ----------->RAV1(1)          <---------LBD16<---------ANAC58                    ------>MYB83--------->ANAC58             --------->YAB1      <---------ANAC58        --------->ANAC58        ------>MYB83----------->GT1--------->AHL20(2)    --------->ALFIN1        --------->ANAC58        --------->ANAC58          --------->YAB1        <---------LBD16      ---------->DOF2           ------>MYB46(1)      ----------->GT1          --------->MYB46(2)-----   agcccaattcaagcccaagaccaagcccaagaccaagcccaacaaatagtcaaaagagtaaaataataagcggaagaagttaggcggggcttaggcagaa  17637100                                       --------->YAB1                                      >>>>>>>>>MYB98                                     <-----------GT1                            --------->DEAR3(1)                                                    <--                           --------->MYB46(3)                                                    <---                         <---------ALFIN1                                        ----------->RAV1(1)                        --------->MYB46(3)    ------------>CBF   <---------AHL20(2)   ---------->DOF2                        --------->DEAR3(1)<---------ICU4        --------->YAB1  <----------ID1<------ ---->ARR14(2)    <----------DOF2<----------DOF2        <----------DOF2   --------->AHL20(2)  <------   ttcgaaactctctccaacttctttcgcccaccgctcttttaacataattccaatatttctttcttatattaatctttttaatacaacaaaaagacacttt  17637200                                                                                                   <-                                                                                                 ----      ------>ZmHOX2a(1)     *TSS                                                           <---------MYB59 ---------GT1            ------>ZmHOX2a(1)                                                 --------->TOE1(3) --------GT1    <---------At4g35610                                               ----------->RAV1(1) ---DAG2        --------->LBD16                <-----------GT1            <---------At4g35610    <--- ----DOF2      --------->ANAC46           <----------DOF2          ------>ZmHOX2a(1)       --------->TOE2(3)   tacccttcctcttcttcccgctgtttcctctcttctctctccatctttttctccatcttccctcttctccttcttcatcttcccccacaaaaacctaaat  17637300                                                                 ------>NtERF2                                                                 --------->ABI4(1)                                                                --------->DEAR3(1) <---------bZIP60(1)                                                             <---------ALFIN1      --------->REM1(1)                                                            <-------TEIL         ====================                                                           --------->CCA1(2)     ----------->RAV1(1)                                                          --------->ARR14(2)    ----------->HVH21                                                          <---------ARR14(2)   <------NtERF2                                                         --------->GLK1(1)     ------>NtERF2                                                      --------->LBD16          --------->LBD16      <                                                    <---------LBD16           --------->RAP2.6(2)   < --------->ARR14(2)                                --------->MYB52(1)         <---------ATERF1(1)   - <---------GLK1(2)                                <---------ALFIN1      <---------AtLEC2            - --------YAB1                                     --------->AtMYB61  <---------MYB52(1)            -- ----->YAB1                                      --------->MYB46(3) <-------GAMYB------>NtERF2     -- --------GT1                                     <---------MYB55(2) <-----------HVH21       <--------   cacgattctccaaaatcgcttcaaaaaatcactctaaatcccatcttctctaccaccggagatacaccgccgttacatggccgcgacatcaaactcaggc  17637400   ------>ZmHOX2a(2)  --------->ARR14(1)  <------ZmHOX2a(2)  --------->CCA1(2) <---------ARR14(2) --------->ARR14(2) --------->ARR11(1) --------->ARR11(3)                                                          <---------MYB52(1) <---------ARR11(3)                                                       ------>ZmHOX2a(1) ===RAV                         <---------DAG2                          ------>ZmHOX2a(2) ---------GLK1(1)               <----------DOF2                         ============================= ---------HSFB2a(1)         ------>ZmHOX2a(2)                         --------->ARR14(2) -------->HSFB2a(1)        <------ZmHOX2a(2)                          <---------ARR14(2) -------->GLK1(1)          --------->GLK1(1)                      ------>ZmHOX2a(1) --------->ARR10           <---------GLK1(1)                      <---------At4g35610            ---- -------->TaMYB80         <---------ARR14(2)                      ----------->RAV1(2) --------->HSFB2a(2) ---RAV1(2)               --------->ARR14(2)                      =============HOX2a_HOX2a     ------   gaagatccgactctctcttaccatcaccgatctccttttcgcttcgaattacttcaatctatctcttcctctgatcctcgttactcttctctaactcctt  17637500                                                                   ----------->HVH21                                                                   --------->ZAT14       --------->DEAR3(2)                                          <---------ZAT14      ------->TEIL                                     ------>ZmHOX2a(1)       --------->GLK1(2)      --------->ARR14(2)                        ------->GAMYB    --------->At4g35610 =HOX2a_HOX2a                             <-----------GT1        --------->ANAC46 ----------------->WRI1                --------->ARR14(2)        <---------At4g35610         <------- >ZmHOX2a(1) <----------DOF2           <---------ARR14(2)      <-----------GT1<---------GLK1(2)------   cttcaacgaatcgacctttctcagtctctcaatcgcttccgaattcacaactgtctcctctaatttcacctcactgggacgattcttactctcaaatcac  17637600                                               <----------DOF2                                     <---------TOE2(2)                                              <                                     <---------TOE1(2)                                        <------ ---------->DOF2                  --------->TOE1(1)             <---------ARR14(2)        <------MYB83 --ATHB12                        ------>ZmHOX2a(1)     <---------YAB1                     <------MYB46(1) --->WOX13(1)       --------->DOF5.7(2)<---------GLK1(2)        --------->ARR14(2)    <---------STY1(2)   tcagaaagttgtgagtctcttcgtttactcaagtcctcgtagattccttctttgattttgattccatttccgaacttgattttgcgatagctaggtttaa  17637700  Previous    Next  AGI:  At1g47870.1    Description:  ATE2F2/ATE2FC/E2FC (ARABIDOPSIS HOMOLOG OF E2F C); DNA binding / protein heterodimerization/ transcription factor. similar to E2F1, transcription factor [Arabidopsis thaliana] (TAIR:AT5G22220.2); similar to E2F1, transcription factor [Arabidopsis thaliana] (TAIR:AT5G22220.3); similar to E2F-related transcription factor 2 [Thlaspi caerulescens] (GB:AAM90621.1); contains InterPro domain E2F Family (InterPro:IPR015633); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316) Range:  from: 17637228    to: 17640210    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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