Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                         <---------ICU4                           <---------ICU4                  --------->YAB1               ------>ZmHOX2a(1) --->ZmHOX2a(1)           ------>ZmHOX2a(1)              --------->GLK1(2)       <-----------GT1 --GT1                   --------->TOE2(3) --------->AHL20(2)               <---------AHL20(2)------- ---AtSPL8        -------->P     ------>ZmHOX2a(1)      <---------GLK1(2)   --------->AHL20(2)<------ -->AtSPL8      XXXXXXXXXXXXXXXXXXXX>MIR839<---------AHL20(2)   --------->ZAT6  <<<<<<<<<<GT-3b ---AtSPL3      --------->MYB46(3) <---------CCA1(2) --------->YAB1   --------->YAB1   --------->TOE2(3)   ctaaatccaatgcatagaacaacccttcctcattcctatatccattaaaatggaattagaatcttaagactatcacatttatttttcttcctcattccat  17620900              <---------ICU4              --------->YAB1        --------->TOE2(3)              --------->TOE2(3) ----------->GT1                      ----------->GT1 ----------AGL3                      <---------TOE2(3)               <------ZmHOX2a(2) --------->AG<---------ATHB12  <-------GAMYB                        --------->ARR11(3) --------->AGL3               <------MYB46(1)                       <---------ARR11(3) --------->AGL1               <---------MYB46(3)           <--------HAHB4 ----------AGL2               <------MYB83                 <---------ICU4 --------->AGL2               ----------->GT1              --------->ATHB12 -------->AGL15           <-----------RAV1(1)             <---------ATHB12   --------->YAB1 ---------AGL15   <----------DOF2   --------->YAB1   --------->TOE2(3)--------->YAB1----------->GT1 -   atatagtaaaacttaatcatctttttttttgttggttataatgttaaacacttaaacttaatcatttatagatcataaaacataatgtgtaattagagaa  17621000                                                                         --------->MYB46(3)                                                              ------>ZmHOX2a(1)                                                          =================HOX2a_HOX2a                                                          ==============HOX2a_HOX2a                                                          ------>ZmHOX2a(2)                                                         <---------GLK1(1)                                                         ===============HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                         ==================HOX2a_HOX2a                                                        --------->ARR14(3)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        <---------ARR11(3)                                                        <---------ARR14(3)                                              =======================HOX2a_HOX2a                                              ==========================HOX2a_HOX2a                                              <------ZmHOX2a(2)     ------>ZmHOX2a(1)         <---------ICU4                       =============================HOX2a_HOX2a        <---------AHL20(2)                   <---------ARR11(3)  ------>ZmHOX2a(1)        --------->AHL20(2)                   --------->ARR11(3) <---------ALFIN1                <----  ----------->GT1       ---------->DOF2    --------->ICU4--------->GLK1(1)                <---------TOE1(2) --------->DOF2 <---------HSFB2a(2) ---------->DOF2     --------->ARR11(3) --------->At4g35610  -----   gagaaagtaaaaaattacccagaaggcaaagcgtcaacaaaagtcaagatcatctcgagatctcctcctccttcaacagctagaccatctcgcatgtcat  17621100                               <---------REM1(1)                                   --------->At4g35610                         <---------SPL7                                      <-----------HVH21                        <------MYB83                                        --------->ANAC58        <                        <------MYB46(1)                                     --------->ANAC46        <                    <---------ANAC58                                        --------->bZIP60(2)     <          <---------MYB46(3)   --------->ALFIN1      <---------HSFB2a(2)    <---------TGA1a        <-         --------->WRKY38(1) <---------ANAC46    <----------DOF2            --------->O2          <--        <---------MYB52(1) <-------TEIL          =====================================bZIP_DOF    ---        --------->ATERF1(1)--------->SPL7   <------NtERF2                   --------->ANAC58    <----       <-------GAMYB<---------ANAC58   <---------DEAR3(1)                   <---------O2        -----      <---------ANAC58 <---------TOE1(2)    --------->ATERF1(1)             --------->TGA1a    ------      <---------ANAC58 ----------->ARR10   <---------ZAT18              =============================      <---------ANAC46 <---------TOE2(2)  <---------ANAC46             --------->ANAC46<---------ZAT6 -----At4g35610     <---------ANAC46   --------->ALFIN1             --------->ZAT14<---------At4g35610 ---->At4g35610  <---------MYB52(1) <------ZmHOX2a(1)--------->HSFB2a(2)<------ZmHOX2a(1)  --------->MYB59   cagcaatggcgttggctacgttgcgtaggtacggtgtaggagtggcgcagtctttctgaaacttggtcagtataggacacgtcgaagcagagttagatcg  17621200      --------->bZIP60(1)      <---------bZIP60(1)                                        --------->ALFIN1    <------NtERF2                                                ----------->TGA1    ------>NtERF2                                                ----------->HVH21  <---------ANAC46                                             <---------ANAC58 <---------At4g35610                                        <---------ANAC46 <---------------------WRI1                               <---------ZAT14 --------->ATERF1(1)                                      --------->ZAT2 <------NtERF2                                      ------>ZmHOX2a(2) --------->At4g35610                               --------->CCA1(2)<---------TGA2(1) ---------ATERF1(1)                                --------->ARR14(1)  <-----------RAV1(2) ---------RAP2.3(1)                                <------ZmHOX2a(2)----------->HVH21 ---------ORA47(2)                                --------->ARR14(2)<---------ETT(2) --------DEAR3(1)                                 <---------ARR11(3)--------->bZIP60(1) -------ORA47(1)                                  <---------ARR14(2)<---------bZIP60(1) ------>SPL7                                      --------->ARR11(3)--------->ETT(2) -----SPL7                 --------->ALFIN1       --------->ARR11(1)--------->TGA2(1) ------>HVH21            <---------ANAC58     ---------->DOF2  <---------ANAC58 >ZmHOX2a(2)             <---------ANAC58 ----------->GT1 <---------ZAT2                  ----------- =HOX2a_HOX2a            <---------ANAC46--------->DAG2  --------->ALFIN1             <---------YAB1   gacggcggacatcacgatgtaattggagcgtggtcgagatgagaaggtgaaagatccgagtgctggggtgacgacaggggaagaaaacatgagtgacatt  17621300                                   ---------->DOF2                                  *TSS  <---------WRKY12                               <------ZmHOX2a(2)                              <---------AGP1                              --------->ARR11(3)                              <---------ARR14(3)                                                 ----                              --------->ARR14(3)                                             <-------                              <---------ARR11(3)                                             <-------              <---------MYB52(1)------>ZmHOX2a(2)                                       <---------ANAC58       <------MYB46(1)        <---------ARR14(2)                  <----------DOF2       <---------ANAC58      --------->MYB59         --------->ARR14(2)         --------->AHL20(2)     <---------At4g35610 >HVH21<------MYB83     <---------------------WRI1       <---------AHL20(2)    ----------------------   gtcgaagtttggttctgttttgtaagaacgaagatctcaaagtcaactttcaactaaaatttataaaactttctagttgctctgctacttgcttacttta  17621400                    <------MYB46(1)                            <-------TEIL  <----------DOF2      <---------YAB1<---------ANAC46                          --------->CCA1(2)   <---------AHL20(2)       <---------HSFB2a(2)              <---------ARR14(2) ----->ANAC55(2)    <------MYB83                             --------->ARR14(2) ---DOF2--------->KAN4(2)   --------->HSFB2a(2)              --------->ARR11(3)  <----------DOF2 --DAG2<---------KAN4(1) <-----------GT1           --------->ZAT18     <----------DOF2 ->TaNAC69(2)  <-----------RAV1(1)                 <---------ZAT18 <---------GLK1(2)        <--------   cttatttgattattctcttgttgggttttacgagaagaacaagtttttttttgtccactagaagatacagtttctttttctttctttttttttttaacaa  17621500                                                                              --------->AHL20(2)                                                                          --------->AHL20(2)                                                                   --------->YAB1                                                              <---------GLK1(2)                                                              --------->ARR11(3)                   --                              <---------AHL20(2)              <---------ARR14(2)                 ----                              --------->AHL20(2)              --------->ARR14(2)               ------                            <----------DOF2              --------->MYB52(1)   <---------AHL20(2)-----                       <-----------GT1        --------->CCA1(2)   <---------YAB1       <-----------GT1 ---GT1         <-----------GT1       ---------->DOF2 --------->YAB1    --------->TOE2(3)--------->ZAT6   gagggagcaatttctaattttctattttctctttaaataagaaagatgatatgcaagaataacagattttgataacttaattaaacgtataacaccataa  17621600                                       -------->HAHB4                                       --------->YAB1                               <---------ZAT18                               --------->ZAT18                            --------->ALFIN1       ---------->DOF2      <---------MYB46(3)                                     ----------->GT1 --------->GT1            <---------ANAC58                                    --------->DAG2 ------->GT1              <---------ANAC58                              --------->YAB1 ---->DOF2        --------->ZAT6      <---------ATHB12            >>>>>>>>>TBF1----------->GT1 ---->DAG2    <---------MYB52(2)      --------->ICU4     <---------MYB46(3) ---------->DOF2   agtgaaaaataaagaaactaacactatgggttgtggactaatgatcaatttgggtttagttgttagaagaagaagcataaaaggtgagaaaaaaacaata  17621700                            <---------ANAC58                                            <---------MYB59                            <---------ANAC46                                           --------->ANAC55(2)                       <---------ICU4                                            --------->AHL20(2)                  ------>ZmHOX2a(2)                                           <---------AHL20(2)                 <------ZmHOX2a(2)                    <---------GLK1(2)       --------->AHL20(2)                <---------ARR11(3)           --------->GLK1(2)               --------->AHL20(2)                --------->AGP1         --------->TOE2(3)                   --------->YAB1                --------->ARR11(3)     --------->TOE1(3)  <----------DOF2 <---------AHL20(2)     <---                <---------AGP1--------->AtLEC2  <---------YAB1           --------->AHL20(2)  <-------           <----------DOF2  <---------ANAC58 --------->ARR11(3)    <-------TEIL  <---------AHL20(2)    <----------DOF2   --------->AHL20(2)     <---------ARR11(3)   --------->CCA1(2)    <---------ANAC55(2)   gtttctctttccactttagatctattaattccttgcaaaaacctgaaaatcttatagatactttatagatacacatataataaataaatacttaactttt  17621800  Previous    Next  AGI:  At1g47840.1    Description:  hexokinase, putative. Identical to Probable hexokinase-like 1 protein [Arabidopsis Thaliana] (GB:Q9FZG4); similar to ATHXK1 (GLUCOSE INSENSITIVE 2), ATP binding / hexokinase [Arabidopsis thaliana] (TAIR:AT4G29130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60993.1); contains InterPro domain Hexokinase; (InterPro:IPR001312) Range:  from: 17618547    to: 17621334    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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