Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                             <------NtERF2                                                -----------                           <---------ANAC58                                           ---------->DOF2                           <---------ANAC58                                       --------->TOE1(3)                <------MYB46(1)         --------->ZAT6                            --------->TOE2(3)                ----------->GT1      <-----------GT1                              --------------->AGL15                <------MYB83 --------->ATERF1(1)        ----------->GT1           <---------------AGL15    --------->TOE2(3)      --------->bZIP60(1)         --------->TOE2(2)   --------->YAB1----------->GT1    --------->TOE1(3)      <---------DEAR3(1)          --------->TOE1(2) --------->GLK1(2)<------ZmHOX2a(1) ------>At4g35610          <---------ANAC46          ------->TEIL     <---------TOE2(3)  <----------ID1   agcaaacctcaacgaagttggtgaatttggcgtcgcgattcaccactaatctatgaacctgtgaaaagaattaagaatcagaaacctaaaaaggataaaa  17617000                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)                                                           <---------HSFC1(2)                                                         <---------GLK1(2)                                           --------------------->WRI1                                           <----------DOF2 <---------HSFB2a(1)                                    <---------ARR14(2)   <---------ARR14(2)                                 --------->TOE2(1)   --------->HSFB2a(2)    <---------At4g35610  <---------------AtSPL8      <---------LBD16 ------>DOF2<---------GLK1(2)    --------->TOE1(1)   <---------HSFB2a(2) >GT1 <---------YAB1 --------->ICU4 --------->ARR14(2)   --------->ARR14(2)   aaaggaagatgatagaatttgaaatgagtagtacctcgtattcgactttgtgtttctcggattcttcgagagggacatagtatttggctagacgagtctt  17617100                             <------ZmHOX2a(2)                            <---------ARR14(2)                            --------->ARR14(2)                            --------->ARR11(3)                            <---------AGP1                            <-----------ARR10                           <---------CCA1(2)                           <---------ARR14(1)                    <---------YAB1                --------->YAB1------>ZmHOX2a(2)                --------->AHL20(2)               <---------ATHB12                         --------->YAB1                        -------               <---------ATHB51                        <------ZmHOX2a(2)        ---------->DOF2     -      <---------ZAT14  ------->TEIL                --------->ALFIN1<-----------HVH21      ---------->DOF2   accttgtctgttctgcaataatatgaatcggatctggacaaattgggagagaggtggatcagaattgagcgtcagacatgaacaaaggaaaacaaagtgg  17617200                                                                                           --------->GLK1(1)                                                                                          <---------AGP1                                                                                          --------->ARR11(3)                                                                                          <----------                                                                                          <---------ARR14(2)                                                                                          --------->AGP1                                                                              <-----------GT1                                                                            --------->HSFB2a(1)                                                                            <---------HSFB2a(1)                                                                            --------->HSFC1(2)                                                                            <---------HSFC1(2)   <---                                                                           <---------KAN4(2)------>ZmHOX2a(2)                                                                         ==========================HOX2a_HOX2a              --------->ZAT14                                            =========================HOX2a_HOX2a              <---------ZAT18                      =======================HOX2a_HOX2a     <---------ARR11(3)              <---------ZAT14                   <---------LBD16          <------ZmHOX2a(1)--------->ARR14(2)       --------->DAG2                           <-----------RAV1(2)=============HOX2a_HOX2a<------ZmHOX2a(2)      ---------->DOF2            <---------ARR11(3)<------ZmHOX2a(1)  --------->At4g35610<---------At4g35610 -->ALFIN1  --------------->AtSPL8   --------->MYB52(1)            <------ZmHOX2a(2)     <---------CCA1(2) ---------->GT1                  --------->GLK1(2)--------->LBD16 <-----------HVH21 <----------DOF2   aagagaaataaagcagtgtaccattttctctgcaaaatctaatggagaattcaggagaaatcgtgagcgatcagaggaattttcttctttcagatctcac  17617300                                                                                               <-----                                                                                     --------->ATHB12                                                                                  <------------CBF         --------->ANAC46               --------->At4g35610                     --------->AHL20(1)         --------->ANAC58          --------->DAG2                               --------->AHL20(2)         --------->ANAC58         ---------->DOF2                               <---------AHL20(2) -ARR10<-----------GT1      <---------GLK1(2)                     *TSS         --------->AHL20(2)   - -------DOF2  <----------DOF2 <-------TEIL                ---------->DOF2 <---------TOE2(3) <------ZmHOX2a(1)   tttgaattttcacgacctttgttgaaaacaggttcgtaaagcagccaaactatccagtcaaaaagatggagtttttaagaaaaaaattgatttaggagga  17617400                              ----------->GT1                            --------->CCA1(2)                                     <-----------GT1                           <---------ARR11(3)                             <---------DAG2                           --------->ARR11(3)                             <----------DOF2    -------- -ZmHOX2a(1)             ----------->ARR10                            --------->REM1(1)     <-------- ---------->GT1        ---------->DOF2  <---------GLK1(2)        <-----------GT1 <-----------GT1  ---   aatagaaaaataagcttggagctagaaaagatttgtgaaatagaatttttgttttaaaaatttgatttaactacaactttttttttccaactcaatgaaa  17617500                                                                    <---------RVE1(1)                  --------->ARR14(2)                         --------->ATHB12                  <---------ARR14(2)                  <---------AHL20(2)  <---------ANAC55(2)                        <---------MYB52(1)     <---------CCA1(1)  <---------ANAC46<---------ARR11(1)       ----------->GT1  <---------YAB1  --------->ANAC55(2)                   --------->ARR14(2)  <---------AHL20(2)                   ----  <---------ANAC55(1) ------>ZmHOX2a(1) --------->GLK1(2)  <---------AHL20(2)         --------->AHL20(2) ->AHL20(2) --------->ARR14(2)          <---------ARR14(2) --------->AHL20(2)---------->DOF2   <----- -ATHB12    <---------ARR14(2)  ----------->GT1      <---------AHL20(2)    <---------YAB1    -------- ------>AHL20(1) <---------CCA1(2) <-----------GT1   --------->AHL20(2) <---------AHL20(2)  <--------   tattatgtgtttcatattcgtatcctctcaaaactagttacaaatctgttaatttttaaattttaattggatattttatgaaagttcaaaaaatatgata  17617600                                                                                             --------           <---------AHL20(2)                                                         --------->ANAC58           <---------AHL20(1)                                                  <---------ANAC58        <---------AHL20(2)                                                     <---------bZIP60(2)   --------->AHL20(2)                                                          <---------ANAC46   <---------AHL20(2)                                                          <---------ANAC58 ------>DOF2<---------AHL20(2)                                  --------->TOE1(3)     --------->ANAC58 ----YAB1  --------->AHL20(2)              ----------->GT1      --------->TOE2(3)----------->HVH21 ->YAB1--------->AHL20(2)        <----------DOF2      --------->At4g35610      <---------bZIP60(1) -YAB1 <---------AHL20(2)    <----------DOF2        --------->YAB1             --------->bZIP60(1)   aaagttttattaatttttttttgttataaggctttcttttttttttggtgaaaatcagaagaaaaaccttaatcgaacatgtcgtgacacgatagttcag  17617700                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          --------->HSFB2a(2)--------->ANAC58                                 --------->LBD16          <---------HSFB2a(2)--------->ANAC58                                <---------HSFB2a(2)    --------->ARR11(3)   ------->TEIL                               <---------LBD16         <---------ARR11(3)--------->ANAC58                              <---------LBD16          --------->GLK1(2) --------->ANAC58                            --------->ARR14(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxx   --------->YAB1           <---------ARR14(2)  <---------AtLEC2    --------->YAB1      --------->WOX13(1)  <---------YAB1        XXXXXXXXXXXXXXXXXXXX>MIR395A/D/E  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->ZAT14               ---------->DOF2         <-------TEIL<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   acttatcatccctaaatatcgaaatcaaagtattcgggagaacatcaaatgcatgaaaatctagaaacaatgaaaacgcatgtaatttgtcaatccattt  17617800                      --------->ANAC46                                             <-----------------AG                      <---------ANAC55(2)                                          <-----------------AGL1                <----------DOF2                                         <---------AHL20(2)               --------->TOE2(3)                                        <---------AHL20(1)           ------>ZmHOX2a(2)                                            --------->AHL20(2)           ===============================HOX2a_HOX2a                  --------->AHL20(2)         <---------ARR11(3)            <---------ARR14(2)         ----------->GT1 <-----------GT1         --------->ARR11(3)        <------ZmHOX2a(1)     <----------DOF2--------->AHL20(1)    <------ xxxxxxxxsmallRNA(i)  --------->ANAC55(2)               --------->TOE2(3)   ----------->GT1   -------   gtgaaacggttgatcttcctttatacgtgaaatattaggactatccagtactgcaaaacctttttgaatgctaataaattgtattatccattttggatat  17617900  Previous    Next  AGI:  At1g47830.1    Description:  clathrin coat assembly protein, putative. similar to AP19 (associated protein 19), ATP binding / protein binding / protein kinase [Arabidopsis thaliana] (TAIR:AT2G17380.1); similar to clathrin adaptor complex small chain family protein [Arabidopsis thaliana] (TAIR:AT4G35410.2); similar to Os12g0207300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066387.1); similar to unknown [Populus trichocarpa] (GB:ABK93377.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, sigma subunit/coatomer, zeta subunit; (InterPro:IPR000804); contains InterPro domain Adaptor protein complex, sigma subunit Range:  from: 17615538    to: 17617366    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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