Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <-------GAMYB                                                        <---------ANAC46                                                        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                       --------->LBD16                                                       <---------LBD16                                                      <---------ANAC46                                                      xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                  <---------SPL7                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                  xxxxxxxxxxxxxxxx>smallRNA(le3)                   <-                                                  <---------ZAT14                               -----                                                  --------->ZAT14                               <----                                                 --------->ALFIN1                             -------                                               <---------ANAC46                               <------                                           <---------LBD16 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)-------                                       --------->ARR11(3)--------->LBD16                     --------   <-----------GT1                --------->AHL20(2)------->TEIL                             <------- ------>AHL20(2)                  --------->AHL20(1)xxxxxxxxxxxxxxxx>smallRNA(s)             -------- -------AHL20(2)           --------->AHL20(2) <---------DEAR3(1)                         --------->AHL20(2) -------YAB1 --------->AHL20(2)  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ATHB12 ----->AHL20(2)            <---------AHL20(2)<---------LBD16           <---------ZAT6 --------->WOX13(1) ------AHL20(1)           <---------AHL20(2) --------->LBD16 <xxxxxxxxxxxxxxxxsmallRNA(i)--------->YAB1 ----->AHL20(1)    <-----------GT1<---------AHL20(2)--------->SPL7     --------------->AtSPL8<------- ---->YAB1<----------DOF2 --------->AHL20(2) ------>NtERF2----------->GT1 xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   ataatttacagacttttatatatactaatttaaaaaaaaattatctccgcggtgtaccgcgggttataatctagtggtactacatattcaatcaaattat  17608600                                                           <---------WOX13(1)                                                <---------AHL20(2)                                    ----------->GT1      --------->ATHB12                                  <---------ANAC46      <---------YAB1 --------YAB1             <---------AHL20(2)    <---------AHL20(1) ---->ICU4           --------->AHL20(2)       <---------AHL20(2) -----YAB1           --------->AHL20(1)    <---------ARR11(3) -->YAB1             <---------ARR11(3)    --------->ARR11(3) ---ICU4             <---------AHL20(1)    <---------AHL20(2)                       --------->YAB1 ->ATHB1             <---------AHL20(2)    <---------AHL20(1)                    --------->WOX13(1) - ->AHL20(2)          --------->ARR11(3)    --------->AHL20(1)          --------->ANAC46 --------->YAB1 --AHL20(2)         --------->AHL20(2)     --------->AHL20(2)          --------->HSFB2a(2)         <- ->ICU4       ----------->GT1    --------->ATHB12<---------YAB1     <-----------GT1<---------ATHB12-- --ATHB51  --------->ATHB12---------->DOF2--------->AHL20(2) --------->YAB1  <----------DOF2  -------   tattaatccaaattgattgtaaatatattaaaagttgattgtaaatatattattttttgtgattgataattttccacaactttcaatcaatagtattcaa  17608700                    <---------YAB1                                                        <----------DOF2                   --------->TOE2(3)                                                      -----------                  --------->ATHB12                                                        <----------                  <---------ICU4                                                         <-----------    <---------AHL20(1)                                                                   <-----------    --------->AHL20(2)       --------->YAB1                                              <-----------    --------->AHL20(1)      <---------AHL20(2)                                       <--------ATHB1    <---------AHL20(2)     --------->AHL20(2)                                        <---------ICU4   --------->AHL20(2)    <---------AHL20(1)                                          --------->YAB1   <---------AHL20(2) --------->AHL20(2)                                            --------->ICU4 -------->AHL20(2)<--------HAHB4        --------->AHL20(2)                 <---------AHL20(2) --------AHL20(2)<---------YAB1         <---------AHL20(2)           <-----------GT1<---------ATHB51 ------->AHL20(2)--------->ICU4 <-----------GT1            --------->TOE2(3)        <---------ATHB12 -->YAB1<-----------GT1  --------->AHL20(1)    <-------TEIL--------->TOE1(3)    ------------>CBF   aataaataaattacatttcatcattaatatataataactaaattaaaaatgcataagaaaacctaaaatttatacatttttttgcaataattcttttttt  17608800                                                        <------NtERF2                                                        --------->At4g35610                                                      <---------DEAR3(1)                                                      <---------RAP2.6(2)                                                      --------->ETT(1)                                                     --------->RAP2.6(3)                                                 <------------CBF                      --------->ANAC58         --------->AHL20(2)                                 ---                    ---------->DOF2            --------->AHL20(1)                                ----       --------->At5g28300                     <---------AHL20(1)                       --------->ANAC58      ----------->GT1--------->DAG2            <---------AHL20(2)             <<<<<<<<<TBF1----------     <---------TOE2(3)--------->ANAC58      --------->ATHB51        <----------DOF2     --------->ANAC58 ---->AGL15      <------MYB46(1)            <--------HAHB4         <---------DAG2       --------->ANAC46 -----AGL15      <------MYB83               <---------ICU4    <---------At4g35610     <---------ALFIN1 ------AGL3     --------->MYB59            --------->ICU4     --------->At4g35610   ------>ZmHOX2a(1) ------AG   <---------AHL20(2)             <---------YAB1 <----------DOF2<---------ANAC58--------->MYB46(3) ------AGL2--------->ICU4                --------->YAB1<---------DEAR3(2)<---------ANAC58<---------MYB55(2)   ggttattagggtaaatatttggtaaagcaaaacttgtaatcgctcataattaattgtcggcttcatcggccttttgcttcttcttcctccacccaaaggt  17608900                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                               --------------------->WRI1                                   <--------                             <<<<<<<<<TBF1                                                -----------                      <------MYB46(1)                <---------YAB1                      ============ ------>DEAR3(2)     --------->MYB59              --------->ICU4                    <---------LBD16 ----->MYB52(1)  --------->ATHB12             --------->At5g28300     <----------DOF2    <--------P >DOF2  --------->YAB1<------MYB83           <----------DOF2     <<<<<<<<<TBF1<---------AHL20(2)   accgaagctagaataaacttcattaggtttcttcttcgcttacatcgctgtaattttgatttcattcttcttctttagttttaatttcagggtagatatg  17609000                      <---------LBD16           --------->ANAC55(2) ->CCA1(2) <---------O2 >ARR11(3) --------->O2--------->LBD16               --------->ZAT2 >ARR11(1) =======================================bZIP_DOF                           <---------ATHB12 >ARR14(2) <---------ANAC55(2)                <---------ZAT6           --------->REM1(1) -ARR14(2) --------->TGA1a              <---------TOE2(3)          <---------At4g35610    --------->YAB1 >ARR10    <---------TGA1a             ---------->DOF2    ----------->HVH21        --------->WOX13(1) ====================MYC_MYB   --------->GLK1(2)     <---------ZAT2--------->At4g35610    -----------   gagattgagagtcacgtttcagtccctgggaagaatctagttaaagtagagttcaagcttgggacagagagctacactattgattcaatcaatggtgata  17609100                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                             ---------->DOF2                     ----                                                          --------->YAB1                         <---                                                      <---------AHL20(2)                       <-----                                                <---------TOE1(3)                          ----------                                            <---------ANAC55(2)                      --------->bZIP60(1)                                    <---------YAB1<------ZmHOX2a(1)                  <---------bZIP60(1) >GT1                         ---------->DOF2   <---------TOE2(3)--------->YAB1   <---------YAB1 <---   ctgtattggaccaattggtttcgatgaaataagaaagtatgaaaatacttaaggattttatcacaaagcataatgttcaagatgatgatgtccctgacca  17609200          <---------ICU4          -------->HAHB4         <---------ATHB12 -------ARR11(3) ------>ARR11(3) ---------ARR10                    --------->MYB46(3) -------ARR11(1)                  --------->ANAC58 ------>ARR14(2)      ----------->RAV1(2) -------ARR14(2) <---------ANAC58 ------>MYB46(1) -->MYB83--------->ICU4           --------->ANAC46              <----------DOF2 -->MYB46(1)<---------YAB1        --------->ANAC58   <-----------GT1 ------ARR14(1)  <---------ANAC58 ------>MYB83    --------->CCA1(2)                          -------- ----MYB59--------->YAB1------>ZmHOX2a(1)<----------ID1 <----------DOF2               --------->YAB1 ->HVH21<---------TOE2(3)       --------->AtMYB61<---------ARR11(3)             <---------DOF5.7(2) ------CCA1(2) <---------YAB1  --------->MYB46(3)--------->ARR11(1)            <---------WRKY12   ---   aatcttgtctaatgatgatgcttctcctgtgaaaccacccaagaagacaaagatttgacttttcttcttttcttccaaaggtaaacgatgaaaatttgta  17609300                                                             --------->ARR14(1)                                                             --------->CCA1(2)                                                            <---------ARR11(3)                                                            --------->ARR11(3)                                                            <---------ARR14(2)                                              --------->bZIP60(2)                                  <---------CCA1(1)         --------->ARR11(1) <---------YAB1<---------ARR11(3) <---------RVE1(1)         --------->ARR14(2)     --------->ANAC58 --->GT1   ---------->DOF2       --------->ARR11(3)      <---------TOE2(3)         --------->ANAC58<- ------>ICU4   --------->ARR11(3)<---------ARR11(3)     ---------->DOF2  ---------->DOF2           <-   attctgattttgccaaaggtcttatacatttcagagatatttatggacacatcagttttaaagatatggtttgcaaaaagaagttaagccagaagttgat  17609400                                                                 <---------LBD16                                                                --------->MYB52(1)        --------->YAB1                                     <---------AHL20(2)                      <-       <<<<<<<<<ARR2                                       --------->AHL20(2)                    ----       <<<<<<<<<ARR1                                <---------AHL20(2)                ---------->DOF2 ----------->HVH21                               <---------GLK1(2)       --------->ZAT6       ------- --------ANAC58         --------->AHL20(2)       <---------ARR11(3)--------->LBD16  <---------HSFB2a(2) --------ANAC58      --------->GLK1(1)      --------->MYB52(1) <-----------GT1      --------->HSFB2a(2)   ggcatgacaatcgtaaccaagagaaatcaaatatgaagttggacaataacagattttatgttttattaccggataagactactcttctaaaagcatcgtc  17609500  Previous    Next  AGI:  At1g47813.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47820.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47820.2) Range:  from: 17608998    to: 17609258    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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