Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-----------GT1                                      --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58                                   --------->ARR14(2)       --------->AHL20(1)          <---------ARR14(2)                  <---------ICU4       --------->AHL20(2)        --------->ANAC58                    ----------->RAV1(1) ---------->GT1                  --------->ANAC46         --------->AHL20(2) --------->GT1            --------->ATHB12  <---------AHL20(2)--------->AHL20(2) ------>DAG2>>>>>>>>>WRKY18      --------->ANAC58       --------->TOE2(3)                   <-------- -->GT1<---------AHL20(2) --------->YAB1    --------->AHL20(2)<---------AHL20(2)       <-------TEIL   aaggttaaattttttgacagaattacattgattacaagaaacgcaattaaacaatctacataaattaaatacaacattacaactcaaaatgcattatatc  17592300                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                ----------->RAV1(1)                                                               --------->bZIP60(2)                                                               --------->ANAC46                                                             ----------->RAV1(1)                   <---------ALFIN1   --------->ANAC58     ------>NtERF2         <---------TOE1(1)            --------->ANAC58  --------->At4g35610               <---------YAB1         <---------TOE2(1)        --------->ANAC58      <---------At4g35610             --------->YAB1        --------->SPL7            --------->ANAC58      <---------ZAT2                 <---------YAB1      --------->TOE1(2)          --------->ZAT18        --------->ZAT2              =================      --------->TOE2(2)  <---------ARR14(2)            --------->ALFIN1             ------>ZmHOX2a(1)      <---------SPL7     --------->ARR14(2)           --------->ZAT18               =================     ===============HOX2a_HOX2a<---------ZAT2        <---------ANAC46           <---------ARR14(2)     ------>ZmHOX2a(2)  <---------MYB52(1)           <---------ANAC58           --------->ARR14(2) -AHL20(2)   <------ZmHOX2a(1) --------->ZAT2        <---------ANAC58     --------->MYB52(1)   gcttcgatcgtacgaggagaaacaccgtttccgagctcgcaaggctcaaaaatttgcgtgctgccacaacacgaagtaatggaatcctcatcatagttgc  17592400                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                         --------->LBD16                                                                                         <---------At4g35610                                                                                         <---------LBD16                                                                                         --------->At4g35610                                                                                        --------->DEAR3(1)                                                                                       --------->ATERF1(1)                                                                                      --------->At4g35610                                                                            --------->ANAC58       --                          --------->ANAC46                          --------->ANAC58  <------NtERF2<-              --------->LBD16                                       --------->ANAC58  <---------ZAT2            ------>ZmHOX2a(2)                       <---------GLK1(2)    <---------ARR14(2)<---------ZAT18           <------ZmHOX2a(2)                       <---------At4g35610   --------->ARR14(2)--------->LBD16          --------->ARR14(2)                --------->HSFC1(2)      --------->ANAC46  --------->ATERF1(1)          <---------ARR14(2)                --------->At4g35610   --------->MYB52(1)  <---------ATERF1(1)          ------->TEIL <---------ZAT18      <---------HSFC1(2)<------ZmHOX2a(1)       <---------At4g35610     --------->MYB52(1)--------->ZAT18---------->DOF2      <---------HSFB2a(2)        --------->ZAT2- =================HOX2a_HOX2a      --------->HSFB2a(2)     --------->HSFB2a(2)       <---------ATERF1(1) ==================HOX2a_HOX2a     <---------HSFB2a(2)     --------->LBD16  --------->ANAC58------>NtERF2   catgaactaatggatccgagatttgtccacaaaacctcgagaaagaagcttacagcttctccgaggactaacgcaaaaacgcataggcagccgcggactt  17592500                      --------->bZIP60(1)                      <---------bZIP60(1)                    <---------ICU4                    -------->HAHB4                     <---------ALFIN1                    --------->YAB1                    <---------ZAT14                   --------->ICU4          ------>NtERF2 --------->ANAC46         ---------->DOF2                  --------->ANAC46     --------->At4g35610    --------------------->WRI1--------->ZAT14 ------->ZAT14     <---------YAB1         --------->DEAR3(1)          ------------>CBF --------ZAT14  --------->ICU4            --------->ANAC58        --------->TOE1(3) -------->ZAT6 --------->ARR11(3)         --------->ANAC58        --------->TOE2(3)   ctacactagctcaaagagataatgatgccacttagacctattcgacgcctctattctacactcgacaaccttagcaatacaactagaagctcattaacac  17592600                                                    ---------->DOF2                                                   ------->GAMYB                                                  --------->MYB46(3)                                                 --------->ANAC58                                                 --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58          ---------->DOF2                                             --------->ANAC58      <----------ID1                                           ---------->DOF2     <------------CBF                          <----------ID1--------->TOE2(3)     --------->ATHB12             --------->ATERF1(1)                  --------->REM1(1)     --------->TOE1(3)   <---------------------WRI1     <------ZmHOX2a(1)   ataaaaatcccaactcgactacaacttaacaacaaaactcaaccttaacgcaaccaaagactagcgattgggacaaagacaaatttagatggaggagcca  17592700                                                                                        --------->TOE2(3)                                                                                        --------->ANAC58                                                                                        ------->GAMYB                                                                                        --------->ANAC46                                                                                    ----------->HVH21                                                                               ------>NtERF2                                                          ----------->RAV1(1) --------->ANAC58                                                         --------->AtMYB61    --------->ANAC58                                                        --------->MYB46(3)  <---------ALFIN1                                                      --------->ANAC46   --------->AtMYB61                                                      --------->ANAC58  --------->MYB46(3)   <-------                    ------>NtERF2            ---------->DOF2--------->AtMYB61 --------->ANAC46                   <---------ALFIN1         <------ZmHOX2a(1)         --------->ANAC58  --------->RAP2.6(2)                <-----------GT1      ---------->DOF2  --------->ANAC58--------->ANAC46  --------->ANAC58             --------->GLK1(2)<---------At4g35610    --------->ZAT18  --------->ANAC58 --------->MYB46(3)   tagccatggctgaagaatttgccaccttcttcagccctctaaaggaggaaagaagcacaccaccaaaaacacaaaccactacgcctctaaccgcaatgaa  17592800                                                               <---------ANAC55(2)                                                               --------->ANAC55(2)                                                               --------->ANAC58                                                               --------->ANAC55(1)                                                               --------->ANAC46                                                       <------ZmHOX2a(2)                                                      --------->AGP1                                                  <---------MYB52(1)                                                 <-----------HVH21                                                --------->bZIP60(2)   <-----------HVH21                                                --------->TGA1a--------->ANAC58                                                --------->O2<---------ARR14(2)                                                --------->ANAC58     --------->AtMYB61                                                --------->ANAC46     ------->GAMYB                                                --------->ANAC58     --------->YAB1                                   --------->HSFB2a(2)<---------ARR14(2)                                   --------->HSFC1(1)<---------At4g35610                            <              ============================================bZIP_DOF  --------->MYB46(3)       --------       <----------ID1              <---------HSFC1(1)--------->At4g35610                    <------ZmHOX2a(1)     ---------->DOF2       <---------ANAC58     =============================MYC_MYB      <---------TOE1(3)   ---------->DOF2         <---------ANAC58----------->HVH21--------->ARR14(2)            <---------TOE2(3) --ATHB12     ---------->DOF2      <---------HSFB2a(2)--------->ARR14(2)       ----------->GT1      -   caatccaaagagccaaaaaagactacgaggcttgcctctagaagagcgacccgtcagatccaaatacgcaaccatcagagcgggagaaaattaaggaaag  17592900                                                                                            ---------                                            <-----------------AGL2                         <---------ANAC55(2)                               <---------At4g35610                                         --------->ANAC46                               --------->ZAT2                                           --------->ARR14(2)                              <-----------ARR10 ---------->DOF2                         <---------ARR14(2)                          --------->HSFB2a(2)--------->HSFB2a(2)                       <---------GLK1(2)                          <---------HSFB2a(2)<---------HSFB2a(2)                       <---------ARR14(2)                       <---------SPL7       ----------------->AGL2                     --------->ARR14(2)                --------->ARR14(2)          <-----------------AGL1                 <-----------------AGL1                <---------GLK1(2)           ----------------->AGL1                 --------->ANAC46     --------->LBD16  <---------DAG2   ------>MYB46(1)                      <---------DEAR3(1) ---------PCF2  <---------ARR14(2)     ------>MYB83                        <---------------------WRI1 -->DOF2      ----------->ARR10--------->At4g35610                     --------->MYB52(1) <---------LBD16 -------->TCP15(1)    <----------DOF2  -------->P              --------->At4g35610------->TEIL   agggacccgagaagagaagaatcgccttaccgaagctcaccaacttgccagaaagggactgtggtacctgaaaaaacggcgatgcacccgattccgcaag  17593000                         --------->DEAR3(1)                         --------->RAP2.6(2)                         --------->RAP2.3(2)                        --------->RAP2.3(1)                        --------->ATERF1(1)                        <------NtERF2                        <-----------------------TaNAC69(2)                 <---------MYB52(1)                 <---------ARR14(2)                     ------->PIF5                 --------->ARR14(2)                     <-------PIF5              <------NtERF2                          <------------OsbHLH66             --------->LBD16  <-------PIF5          <---------ZAT18             ------>NtERF2 <---------ALFIN1         --------->ZAT18           --------->ATERF1(1)------->PIF5     --------->CCA1(2)         --------->PCF2--------->At4g35610    --------->ARR14(2)         --------->PCF5<---------ATERF1(1)    <---------ARR14(2)       <------MYB46(1)--------->ARR14(2)    --------->LBD16                 ---------->DOF2    <------ZmHOX2a(1) <---------ARR14(2)  <-----------------AGL1      <---------ICU4 >LBD16<------MYB83  <------ZmHOX2a(1)    <---------LBD16           --------->GLK1(2)   ----------->GT1   tctagaggatggtcccgccgataggagccgcacttgctacaaactccggatatgggcacttgctctcaagaatcaatacaaagtattgtatggagaattc  17593100                                                   <---------TOE2(2)                                                   <---------TOE1(2)                                                  ------>ZmHOX2a(1)                                                 --------->TOE2(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                                              --------->ARR14(2)                                              <---------ARR14(2)                                             <---------KAN4(1)                                             --------->HSFB2a(1)                                             --------->KAN4(1)                                             <---------GLK1(1)                          --------->ANAC46   --------->GLK1(1)                       --------->TOE1(2)     <---------HSFB2a(1)                     ====================================HOX2a_HOX2a                     <------ZmHOX2a(2)      ---------->TaMYB80                     --------->PCF2         <---------KAN4(2)                       <---------ANAC46                     ============================HOX2a_HOX2a       <----------DOF2 <---------RAP2.6(2)                  <---------ANAC58        <------ZmHOX2a(1)   <---------MYB59     <-------TEIL                  <---------ANAC58   --------->ALFIN1 <-----------RAV1(1)        --------->ALFIN1                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->ALFIN1        --------->DAG2           <-----------GT1----------->HVH21 <XXXXXXXXXXXXXXXXXXXXMIR782     ---------->DOF2   atgtcaagttttttcacattgcgatcccacgacgaagcagtggaggaatatcctaggtgttggacctcactttccattgaaaggtgcggtttacatccac  17593200  Previous    Next  AGI:  At1g47770.1    Description:  beta-galactosidase. similar to beta-galactosidase [Arabidopsis thaliana] (TAIR:AT5G35760.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944) Range:  from: 17592706    to: 17593701    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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