Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ARR14(2)                                                ------>MYB83                                                ------>MYB46(1)                                               --------->ANAC46--------->ANAC58                                               --------->ANAC58--------->ANAC58                                               --------->ANAC58--------->ANAC46                <-----                                              --------->DEAR3(1)                              ------>MYB83                                         --------->ANAC46    ---------->DOF2                  -------                                         --------->ANAC58--------->ANAC58                     ------>MYB46(1)              --------->ATHB12           --------->ANAC58--------->ANAC58                    --------             <---------YAB1            ---------->DOF2--------->ARR14(2)                    ---------            <---------GLK1(2)      --------->ANAC46 --------->ANAC58                       --------->MYB46(3)   --------->ANAC58                --------->ANAC58 ----------->ARR10              <---------ANAC58   ----------->GT1                 --------->ANAC58 --------->ANAC58<---------ANAC46      >>>>>>>>>MYB2   --------->ANAC58         --------->ANAC58  --------->MYB46(3) ----------->HVH21 <---------ANAC58 -------------->ANAC81      --------->ANAC58------->TEIL --------->ANAC46         <------------------   aaaacaagaaaaaagattattggaaaaatcaagaaaaacgcaaacgcaccagccaagaaacgcaaacgcgacgggaagaacaagggcttgaaaaccaaca  17541600                                                                    --------->ARR11(3)                                                       <---------WOX13(1)                          --                                                     --------->ATHB12                              --                                                <-------TEIL--------->ANAC58                  >>>>>>> ----ALFIN1          --------->At4g35610       --------->GLK1(2)   --------->YAB1             >>>>>>> ->P  <---------TOE2(3)                   --------->ANAC55(2)    --------->ANAC58             >>>>>>> --->RAV1(1)   ---------->DOF2       <---------------AGL15  --------->ANAC58               --------->At4g35610 >AtMYB61 ----------->GT1  --------->ICU4 <---------ANAC55(2)    --------->ANAC58 <---------At4g35610 -----TaNAC69(2)--------->DAG2    <---------ARR14(2) <---------MYB46(3)   <---------ANAC46 <---------At4g35610   ccagcgttgagattgtgaaaagcagcgtaatgagcgtttccattacgagattcagtgattggaagccaagcatcttgtgggtttagcttagtgagatgac  17541700           <---------GLK1(1)                                                --------->CCA1(2)           <-----------GT1                                        ------->TEIL          <---------ARR14(2)                                     <---------ARR11(3) ---->MYB46(1)  <----------DOF2         --------->ATHB12         <---------ARR14(2) ---->MYB83--------->GLK1(1)   --------->ARR11(3)    --------->MYB52(1) <---------------------WRI1 >>>WRKY26--------->ARR11(3)   <---------ARR11(3)    ------>MYB46(1)  <---------DEAR3(1)          <-- >>>WRKY38--------->ARR14(2) --------->ANAC58        ------>MYB83<---------GLK1(2)               <--- >>>WRKY43<---------ARR11(3) --------->ANAC58 <---------REM1(1)  --------->ARR14(2)       <------NtERF2   caacttcttcaagataccctttcatgttcacaagaactcgtttcattggtgtaccaatcggactcaagaacctcggtgatatgaacgaagtcggagtcca  17541800               <---------ANAC58               <---------ANAC58              <---------MYB46(3)              --------->MYB111(2)              --------->MYB55(2)              <---------AtMYB61              --------->MYB46(2)          <---------MYB46(3)         --------->WRKY12     <------NtERF2 <------NtERF2  ------>ZmHOX2a(2)                                  <------MYB46(1)    ------>NtERF2 ------------------>SPL14                                           <------MYB83   --------->At1g77200   <---------TOE1(1)                                         <---------ANAC58   ----------->HVH21     <---------TOE2(1)                                         <---------ANAC58   --------->DEAR3(1)   --------->SPL7<---------WRKY18(1)                          <---------ANAC46  --------->DEAR3(2)  <---------SPL7 --------->WRKY45          --------->ALFIN1 --------->ALFIN1  --------->RAP2.3(1) ----------->HVH21                       <---------MYB52(1)<---------RAP2.6(2)  --------->ATERF1(1) <------NtERF2  --------->WRKY38(1)     --------->LBD16  --------->ALFIN1  <------NtERF2<------MYB83     <---------ARR11(3)         <---------LBD16    <---------ANAC46 ------>NtERF2--------->MYB111(1)<---------YAB1         <---------GLK1(1)     <---------ANAC58 <---------RAP2.3(1)--------->ATERF1(1) <---------LBD16 <---------HSFB2a(1)   <---------REM1(1) <---------ATERF1(1)<---------LBD16<----------DOF2     <-----------ARR10      <-----------RAV1(1) ---------HVH21<------MYB46(1)  --------->ARR11(3)     --------->GLK1(2)      <---------bZIP60(2) --------RAV1(1) <---------RAP2.6(2) ----------->HVH21<---------GLK1(2)       <---------ANAC58   tgtcgccgacgatggtttggtggccggacgaggtgatctttgaccggagggagttagaatctccggtgttgaaactcgtggtgtggctggtattgatatt  17541900                                          <---------HSFB2a(2)                <---------ANAC58          --------->HSFB2a(2)                <---------ANAC58       --------->ALFIN1             <----------DOF2  --------->At4g35610      <---------LBD16       <-----------RAV1(2)                               *TSS   <-----------HVH21       <---------At4g35610     --------->ICU4            --------->ZAT6   agctctgtctcgggtctttcgtccattggagcaggtgaagagtgcgagaagaaatgatgttttttttttgttctcactatcactctctctctcactcact  17542000                                                                                                 <---                                                                                        --------->ANAC58             <---------MYB46(3)                                                         --------->ANAC58             <------MYB46(1)            <------------CBF                               <---------TOE2(3)             ----------->GT1      <------------CBF         --------->AHL20(2)         --------->MYB52(1)             <------MYB83<------ZmHOX2a(1)                 <---------AHL20(2)       --------->MYB46(3)            <---------AtMYB61    --------->ATHB12         --------->AHL20(2)        <---------MYB46(2)            --------->ALFIN1   <---------DAG2          <---------AHL20(2)           <---------MYB52(2)          <---------ANAC46     <----------DOF2        <---------YAB1      <------ZmHOX2a(1)    <-----   ccctatttagaggggtggttttttttaggacaactttattggtattgaaacaaatttttatttaattacaagaagaggacagattaactaacgaaattta  17542100                         --------->AHL20(2)                  ----------->GT1             ---------->DOF2                      --------->YAB1            --------->YAB1---------->DOF2        <---------YAB1         --------->WOX13(1)                    --------->YAB1           <---------AHL20(2)      --------->YAB1     <---------AHL20(2)--------->AHL20(2)          <---------AHL20(1)  <---------AHL20(2)  <---------ICU4      <---------YAB1               <---------AHL20(2) --------->AHL20(2)  <---------YAB1    --------->ICU4                  --------->AHL20(2) <---------AHL20(2)  --------->ICU4  <---------bZIP60(1)       --------->At5g28300            ------- ------YAB1<---------ATHB12          --------->bZIP60(1)      ----------->GT1            <----------ID1 ------GT1 <<<<<<<<<ARR2<---------YAB1 <---------YAB1        --------->ZAT6       <-----------GT1  <-   caattaaatgacaatcaaagttgataattaaagaacatgacatgattatttataatggtctcaacagtaacaattttttttttgtaacattacgacaaaa  17542200           <---------ICU4    ------>MYB46(1)                                                      <---------bZIP60(1)    ------>MYB83                                                        <---------AtMYB61 --------->HSFB2a(1)                                             --------->YAB1              <------- <---------HSFB2a(1)                      <---------WRKY18(1)   <---------YAB1             <---------ICU4 --->DOF2 <---------ATHB12               ----------->HVH21    --------->YAB1              --------->ICU4 ----------GT1    ---------->DOF2<---------YAB1              <---------YAB1--------->WRKY18(1)   gtaaccttccccatcaatacaaaagttctgaacatatgtttgtttgaccagtaagtactaagtattatgatggtgaggtcaagtttttgaacattatgac  17542300                                                         <---------DAG2                                                   <---------ICU4                                                   --------->YAB1                                                  <---------YAB1                                                  --------->ICU4                                                --------->YAB1                                               <---------YAB1                                              <---------ARR11(3)                 --------->TOE2(3)                    --------->AHL20(2)        --------->ARR11(3)  <---------At4g35610                    <---------AHL20(2)       --------->YAB1       --------->At4g35610       ---------      <---------AHL20(2)                    <---------YAB1   <---------TOE2(3)   <---------DAG2 --YAB1   <---------AHL20(2)          --------->ALFIN1   <----------DOF2      <-----------GT1    ----   caatttgtttattttttagcaaaaaattgacatgaaataggtgttgatgatcataatcactttaagttagctgaaatatttcaccttatctgagtggaaa  17542400                                                                                ---------->DOF2                                                                           ----------->GT1                                                                 <-----------ARR10                                                                 <---------ARR11(3)                                                                 --------->AHL20(1)    <---------ALFIN1                                                        --------->ZAT6   ---------->DOF2                                 --------->AHL20(2)----------->GT1 --------->TOE2(3)   --------->ZAT6                           --------->YAB1         --------->DAG2 --------->ARR11(3)  <-----------GT1 -->GT1            --------->AHL20(2)            ---------->DOF2--------->RVE1(1) ----------->GT1 ----->YAB1        <---------AHL20(2)         --------->AHL20(2)--------->CCA1(1)--------->DAG2   aataacattgatatatgtaaattaaaaaataacaatgaaatatgtagattaaaaagtaacactgaaatatcttagcaaagtaaaaagtaacacttcaaac  17542500  Previous    Next  AGI:  At1g47670.1    Description:  amino acid transporter family protein. similar to LHT7 (LYS/HIS TRANSPORTER 7), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G35180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78281.1); similar to Os12g0485600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066783.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61273.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 17539107    to: 17541978    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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