Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <----------DOF2   -------->ATHB1                                                         <-------TEIL   --------->ATHB12       <---------ANAC58                        <---------At4g35610   <---------ICU4         <---------ANAC58                <---------AHL20(2)  <---------ATHB12 <---------ANAC58                      <---------AHL20(2)<---------ANAC58  <---------YAB1   <---------ANAC46                      --------->AHL20(2)<---------ANAC58 ---->ANAC46       <---------ANAC58                   --------->ATHB12 <---------At4g35610 ---->ANAC58   <---------------AGL15                 <---------YAB1    --------->At4g35610 ---->ANAC58   <----------DOF2                       --------->ICU4   ----------->ARR10             < --->AtSPL3    <---------DAG2                      --------->YAB1 --------->ZAT2 ------>ZmHOX2a(1) <- ----AtSPL8 <-----------GT1                     <----------DOF2   --------->At4g35610              --   gcccatcattgactttacttttcgtggtacttgctgagaagttttggtacctttgatgattaaatataagctgagatgcgttcctccaatccctccatag  17519900             <---------TOE2(3)            --------->YAB1                                                                          -           --------->ICU4                                                                        ---- ------>NtERF2 --------->YAB1                           <------ZmHOX2a(1)                        <--- --------->LBD16            ---------->DOF2  <---------LBD16                                  <------ ---------ALFIN1  ------>ZmHOX2a(2)         <---------ANAC58                              --------->AHL20(2) --------LBD16 <---------ICU4               <---------ANAC46    <---------TOE2(3)   <---------At4g35610 -------->CDC5 -------->HAHB4               <---------ANAC58<----------DOF2         --------->At4g35610   ctccgcgtccgtattaatgatcccatctccaaaagcttcaaaaatttcgtggaatataggacctttgatgtaatttgagaagtttgagctcattatataa  17520000                           --------->ARR11(3)                  --------->LBD16                 ================================MYC_MYB                 <---------TGA1a           ------->TEIL                      <---------GLK1(1)                 <---------ANAC58        ------->GAMYB                --------->ICU4     <-----------RAV1(1)   <---------AHL20(1)                         <-----------RAV1(1)         <--     <---------MYB46(3)    <---------ARR11(3)                     <-----------TGA1                --- ------>TEIL     <---------ANAC58       --------->MYB46(3)        <-----------HVH21    <---------ARR14(2) ----->ICU4      <---------O2           <---------MYB52(2)       --------->bZIP60(2)  <------ZmHOX2a(1) ------YAB1    --------->At4g35610      <---------MYB55(2)       --------->ANAC58<---------HSFB2a(2) ---AHL20(2)<------ZmHOX2a(2)<-----------GT1      <---------PCF2 --------->ANAC58--------->HSFB2a(2)   tgaatatttgttggatcagccgtggctaatatatccattccaacgaaccatgggcccttgaattgaaacgtcatgttggagttctcgaggaactcgacgc  17520100                                      --------->ANAC58                                      --------->ANAC58                                  --------->LBD16   --------->DEAR3(1)            --------->At4g35610  <---------ANAC46  --------->DEAR3(2)                              --          <-------TEIL           <---------LBD16  --------->MYB52(1)                               --  <---------ZAT6                <---------LBD16  <---------ARR14(2)                  <---------ANAC58 -------ZAT14                <---------ARR14(2) --------->MYB46(3)      <----------DOF2        ------ ------>ZAT14 --------->ALFIN1 --------->MYB52(1)--------->ARR14(2) <--------P       <---------ANAC58   tgtagtcatagatgcgctggagcctcaagagaataccgggaagcattccaagaaccggccagttccaagggtagctttgatgagttttcttgatgagtaa  17520200            <---------ANAC58       ----------->GT1                                     ------->TEIL    ---------->DOF2        ---------->DOF2           --------->TOE2(2)  ----------->HVH21    ----------->GT1          <------ZmHOX2a(1)                                <--- ------->MYB52(1)  --------->ANAC58          --------->At4g35610    ---------->DOF2             ----- ----->TEIL <---------ANAC58     --------->At4g35610 --------->TOE1(2)                    *TSS  <---- --------->AtSPL8  --------->ANAC58    ---------->DOF2  <---------YAB1             xxxxxxxxxxxxxxxxxx   gtacctgaaaggtttcttgacaaggaagtaaaaggagatgagaaagcagaggaaacctatgaatgcttcatatagccctattgaagccattagagagatg  17520300                                                          --------->ZAT2                                                          --------->At4g35610                                                          <---------At4g35610                                                          <---------ZAT2                                                        <---------WRKY12                                                      <-----------HVH21                                                     --------->ANAC55(1)                                                     --------->bZIP60(2)                                                     --------->ANAC46                                                     <---------TGA1a                                                     --------->TGA1a                                                     <---------O2                                                     --------->ANAC58         <---------REM1(2)                           --------->ANAC58       --------->ZAT18                               --------->O2       <---------ZAT18                           --------->YAB1                     <-----------GT1    <---------ANAC46                        ------------>CBF            ---------->DOF2 ----GAMYB                                 --------->ANAC58           <---------AHL20(2) ------>GT1                                --------->ANAC46          --------->AHL20(2) -----MYB46(3)                     --------->AHL20(2)==============================bZIP_DOF xxx>smallRNA(se3)   <---------REM1(1)     --------->ANAC58  ----------->GT1   <------------CBF  <---   gttattttgtgtacaaggagaagatgaaggaactcgattttatacacacaatcacacgtcaactgggaaaatttaaaagtctattgttacattacattga  17520400                                  --------->ZAT6                                  --------->ANAC46                                <---------ALFIN1                              <------ZmHOX2a(2)                              --------->CCA1(2)                             <---------ARR11(3)                             <---------ARR14(2)                             --------->ARR14(2)                         ------>ZmHOX2a(2)                              --------->YAB1                       --------->ARR11(3)                              <---------YAB1                       --------->ARR14(2)                             <---------AHL20(1)                       <---------AGP1                                 --------->AHL20(1)                       --------->AGP1                                 <---------AHL20(2)             <------NtERF2   --------->AGP1--------->CCA1(2)          --------->AHL20(2)          ---        --------->ALFIN1<------ZmHOX2a(2) --------->ARR11(1)         --------->YAB1    --------->TOE2(3)   --------->LBD16     <---------ARR14(2) --------->ARR11(3)<---------YAB1      --------->At4g35610 < <---------LBD16       <---------ARR11(3) <---------ARR11(3)--------->ICU4 <-----------GT1        <-- ------GLK1(1)  --------->At4g35610   ---------->DOF2---------->DOF2<---------YAB1   ------->TEIL----   attcccagagatggaggcatctctagatctagatccacactaaagatatgtttttaaaagtcatttttgtattataataaccagatgaatcttagaacat  17520500              <---------TOE1(3)              <---------TOE2(3)                                   --------->YAB1    <---------YAB1                                         --------------->AGL15  <---------ICU4                                           <---------------AGL15  --------->ATHB12                                        ----------------->AGL3 <---------YAB1                                       <---------GLK1(2)      <---------ZAT14 <---------ATHB12                  ------>ZmHOX2a(1)<---------YAB1----------->GT1 --------->ICU4           <---------DOF5.7(2)      <-------MYC3  <---------TOE1(3) ------>AHL20(2)          <---------At5g28300      ------->MYC3  <---------TOE2(3)       <----------DOF2 ---------TOE2(3)        <-----------GT1     <------ZmHOX2a(1)   <---------YAB1---------->DOF2  ----- -------AHL20(2)      <---------MYB46(3) --------->TOE2(2)<---------YAB1     --------->ZAT14    <---- ----->AHL20(2)       <---------ICU4     --------->TOE1(2)<-----------------AGL1      --------->ICU4   ttaatgatttttgttgaaggttaatggttaccgtctcctataatctaggagcacatgattctcatttatggtaacacactgcaaagtaatgctttatatc  17520600                                                     <---------YAB1                                      --------->ARR11(3)         <---------WOX13(1)           <---------ARR11(3)                       ----------->HVH21    <------MYB46(1)              --------->CCA1(2) --------->YAB1         <---------TOE2(3)    <------MYB83                <---------ARR11(3)--------->ICU4         <---------DOF5.7(2) ---->YAB1           <---------ARR11(3)           <---------YAB1       --------->DOF5.7(2)   <------- -------GT1          --------->ARR11(3)    <---------MYB52(1)         <----------DOF2   -------------   acaatttggtgatagatttgtaagataatttcaagataaacatctcttagttattatgattctaagtctatgctttaacgaatgacacttcccaaatcaa  17520700                                                                                               <-----                                                                <---------ARR14(2)            <------             <------MYB83                        ================================HOX2a_HOX2a  <------             <---------MYB46(3)                  <------ZmHOX2a(2)                           <-------TEIL             <------MYB46(1)                ---------->DOF2  --------->AtLEC2               ---------      ---------->DOF2              ---------->DOF2           --------->ANAC46        --------->ANAC58    <---------YAB1                --------->AHL20(2)       <---------AtLEC2          --------->ANAC58 --ATHB12    ----------->GT1--------->HSFB2a(2) <---------ARR11(3)        ------>ZmHOX2a(1)<-------PIF5 ---->AG  <------ZmHOX2a(1) <---------HSFB2a(2) --------->ARR11(3)        --------->AtLEC2 ------->PIF5   taagttatgaaaggatggttcaatattcttctacaaataaagatgggaaagatcaaagtttccatggaaccgagtcctgcagaaaacaaggcaagtgcgt  17520800  Previous    Next  AGI:  At1g47630.1    Description:  pseudogene, cytochrome P450 family, similar to Cytochrome P450 86A2 (SP:O23066) (Arabidopsis thaliana); blastp match of 45% identity and 3.9e-100 P-value to GP|9081784|dbj|BAA99523.1||AP002484 putative cytochrome P450 {Oryza sativa (japonica cultivar-group)} Range:  from: 17518689    to: 17520290    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g47640.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93176.1); contains domain PTHR12869 (PTHR12869) Range:  from: 17520629    to: 17522568    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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