Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <-----------GT1          <---------AHL20(1)                                                                     ----       --------->AHL20(2)                                                                   ---------       <---------AHL20(2)                                                                ------------     --------->AHL20(2)                                                             --------->MYB52(2)    --------->AHL20(1)                                                            --------->DOF5.7(2)    <---------AHL20(1)                                                            <---------MYB52(1) --------->YAB1                                                                  --------->TOE2(3) --------->AHL20(2)                    --------->ANAC55(2)         --------->AHL20(2)--------->At4g35610 -----YAB1--------->AHL20(1)           <---------ANAC55(2)         <---------AHL20(2)<---------At4g35610 ---->GT1<---------AHL20(2) <---------TOE2(3)                      <---------YAB1--------->TOE1(3)   gaataatatatatatattacttctatagttaagttttaaaaacgtattagtcttcaaacaaactctaatataaatgaccataacgttagctaaatgaatg  17493800                                                         --------->AHL20(2)       <---------ARR11(3)  --------->ANAC58                                       --------->ARR11(3)       --------->ARR11(3)  --------->ANAC55(1)           --------->YAB1           <---------AHL20(2)       --------->AHL20(1)  --------->ANAC55(2)     <---------YAB1                 <---------ARR11(3)       <---------AHL20(2)  --------->ANAC46        <---------AHL20(2)             <---------AHL20(1)       --------->AHL20(2)  --------->ANAC58        --------->AHL20(2)             --------->AHL20(1)       <---------AHL20(1)  <---------ANAC55(2)    <---------AHL20(1)             --------->AHL20(2)     --------->AHL20(2) <---------LBD16         --------->AHL20(1)         --------->AHL20(2)       <---------WOX13(1) ------->HVH21      --------->MYB46(3)   --------->AHL20(2)               <---------YAB1           <- >ATHB12        --------->TOE1(1)        <---------AHL20(2)          <---------AHL20(2)            <- ----------->TaNAC69(2)  --------->AHL20(2)     <---------YAB1      --------->AHL20(2)             <-   ggacacggaacttaaacctcgaaccaatataatttcataacatttaaattcttataaaatatattctatataaaatttgattaatatattgaatattagt  17493900                                                                        ---------->DOF2                                                                 --------->ZAT14                                                                 --------->ARR14(2)                                     <------ZmHOX2a(1)          <---------MYB52(1)                                    --------->ANAC58           --------->At5g28300                                    --------->ANAC58           --------->LBD16                               <-------MYC2                    <---------RAP2.6(3)       <------ZmHOX2a(1)       <-------MYC3                   <---------ANAC58     <---------TOE1(3)         ------->MYC2                   <---------ANAC46     --------->ANAC55(2)       ------->MYC3                   ----------->GT1     <---------TOE2(3)--------->ANAC58                        <---------ANAC55(2)         <----------     <---------ANAC55(2)       ------->MYC4                   <---------ANAC58         <---------AHL20(2) --------TOE1(3)      --------->ANAC46                       <------NtERF2          --------->AHL20(1) --------TOE2(3)      --------->ANAC58                      ------>NtERF2           <---------AHL20(1) --------YAB1  <---------GLK1(2)--------->ALFIN1        <-----------RAV1(1) ----------->GT1   tatggttaaggaacatatattctcacgcagacatgtgcaggaaatgtataagagaaatatggtgccgtaaactcaaaagtgtttaatatttttttctata  17494000           <--------ATHB1           --------->ATHB51                                                                      <---           -------->ATHB1                                                                     <------           --------->YAB1                                                              --------->MYB52(1)           <---------ICU4                                                           --------->ANAC58           --------->ATHB12                   --------->ALFIN1                      <---------ANAC55(2)          <---------ATHB51         --------->ANAC46                                 --------->ANAC55(1)          <---------YAB1           --------->ANAC58                                 --------->ANAC55(2)          --------->ICU4           --------->ANAC58                                 --------->ANAC46   <--------ATHB1   --------->TOE2(3)       <---------ZAT2                          --------->ANAC58 -GT1     <---------ATHB12--------->YAB1    <---------ANAC46<------ZmHOX2a(1)      <-------TEIL  <---   gagaataattcaattattgttttcttaattagaaaacaagacagcgaggtggagaacatggaggacatcaaatccaatgcaaatatacgtaacgagttta  17494100                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58         --------->ANAC58         --------->ANAC46         --------->AtLEC2                                                  ---------->DOF2  ------->TEIL       --------->ZAT14                                     <---------------AGL15 <---------CCA1(2)   <---------ZAT18                               --------->YAB1 <---------GLK1(2)  --------->AtLEC2      <-----------GT1          <---------ICU4            -------- ------ANAC58--------->ANAC58         ----------->TBP             <---------ATHB12         ---------- ---ZAT14--------->ANAC58          --------->REM1(2)    <---------WRKY12 --------------->AGL15 ------ ------ANAC58--------->ANAC58    --------->LBD16      <---------ARR11(3)*TSS              <---------ATHB12   cttgaatctccatgcaagtcccatgcactcaaacccgtgtatataaacccctccaaggtcatcgtttaatcatcaccaaaagaagcacatcaataaagaa  17494200                                                                     <---------HSFB2a(2)                        --------->ZAT18                <----------DOF2                        <---------ZAT18        ---------->ID1        --------->HSFB2a(2)   --------->ANAC46   --------->At4g35610  <---------ANAC58     <---------DEAR3(2) --->GT1           ---------->DOF2         <---------ANAC58   <------NtERF2     --------->DAG2 >DOF2           <---------HSFB2a(2) <---------At4g35610   ---------->ID1     ---------->DOF2 --->AHL20(2)--------->GLK1(1)   <----------DOF2  ------>ZmHOX2a(1) <---------ANAC46   aatacaaaccatggcaattccaaaagctcactactctttagctgttcttgtccttctctttgtcgtcgtttcgagtagccaaaaggtttgcaatccagaa  17494300                                                           --------->HSFB2a(2)                                                      --------->GLK1(1)                                                      <---------GLK1(1)                                                     --------->ARR14(2)                                                 --------->ANAC55(2)                                                --------->SPL1(2)                                                --------->SPL7                                               <---------SPL1(1)                 <---------At4g35610                                               --------->SPL1(1)       <---------DAG2                                              <---------SPL7--------->LBD16      --------->At4g35610                                              <---------SPL1(2)        <----------DOF2                                             ------->GAMYB <---------HSFB2a(2)   <---------ZAT2                  <---------ALFIN1          --------------->AtSPL3  <-----------GT1                 -      ---------->DOF2      --------->YAB1 <-----------GT1 <---------LBD16 <-----------RAV1(1)     ---   tgcaaggccaaagaacccttccactgcgataatactcatgcattcaaccgtacgggatttcccagaaatttcacttttggtgcagctacttcggcttatc  17494400                                                       --------->ATHB51                                                       <---------ICU4                                                       <--------HAHB4                                                       --------->ATHB12                   --------->LBD16                    --------->ICU4                  --------->HSFB2a(2)                 <---------YAB1               <----------DOF2                      --------->YAB1              <---------ANAC58                    <-----------GT1       <---------ARR11(3)           <---------------AGL15       --------->ARR11(3)           --------------->AGL15      <---------CCA1(2)            ----------------->AGL3            <-----------GT1 -------->AHL20(2)<---------HSFB2a(2)        <------ZmHOX2a(1)    ----------->GT1  <---------ICU4 -------->GT1 <---------ANAC58     <-----------------AGL3<---------YAB1          ----------->RAV1(1)   aagtatatatatcttggcttctgggaattgatttttagctatatataggatttttcattattagtattttgttacaatttatccaacatgacttaatttg  17494500                                                                   <-----------HVH21                                                                  --------->bZIP60(2)                                                                 --------->LBD16                           --------->ZAT14                  <---------GLK1(1)          <-----------GT1                           <---------ZAT14                  --------->GLK1(1)      <---------YAB1                           <---------ZAT18                 <---------ARR11(3)     <---------AHL20(1)                        ---------->DOF2                    --------->ARR11(3)   <---------AHL20(2)                  <---------At4g35610               --------->ANAC58        --------->YAB1                 ----------->RAV1(1)                --------->ANAC46   <---------At4g35610               <-------TEIL--------->ZAT18          --------->ANAC58   --------->At4g35610     <----- -------->P   --------->ALFIN1   --------->MYB52(1)<---------LBD16--------->ANAC46<---------AHL20(2)   ttctaccagattgaaggtgcagcacatagagcacttaatggatgggactatttcacgcatagatatccaggtcatctaacatattattttttcccatggt  17494600                                                                                                  <--                    <-----------------AGL3                                                       ----                    ----------------->AGL3                                                   --------               --------->YAB1            ----------->GT1                                     <-------        ----------->GT1              ---------->DOF2                                         <-------      ----------->GT1           ----------->GT1     <---------AtLEC2                        ---------     --------->ALFIN1<---------------AGL15        --------->AtLEC2               <---------AHL20(2) ----ARR11(3)--------->AHL20(2)----------->GT1<---------YAB1<---------YAB1       --------->AHL20(2) -   cttcaatgtggagaaaataatacctatatttagatgttaaaaagagttattcatgcatggtcatgactcatgttttttgttatttatatacagaaaaagt  17494700  Previous    Next  AGI:  At1g47600.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G51490.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G51470.1); similar to OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66812.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21976.1); similar to OSJNBa0022H21.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE05483.2); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 17494172    to: 17497199    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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