Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <-------MYC3                                           ------->MYC3                                          <---------O2                                          <---------TGA1a                                          --------->TGA1a                                          --------->O2                                          --------->ANAC55(2)                                  <---------AHL20(2)                              --------->ICU4      <---------ZAT6                            --------->AHL20(2)    ----------->GT1   <---------AHL20(2)       --------->YAB1<---------ANAC55(2)   --------->AHL20(2)     --------->AHL20(2)----------->HVH21 --------AHL20(2)      --------->AHL20(2) --------->ANAC46 ------->AHL20(2)   ----------->GT1     <-----------GT1                                      -------- ----YAB1          ----------->GT1--------->AHL20(2)       --------->At5g28300      <---------YAB1  < ->YAB1          ---------->DOF2 --------->AHL20(2)       ----------->GT1          <---------AHL20(2) -YAB1           ===================================bZIP_DOF                       --------->AHL20(2)   aatatttaaatttttcaaaaaaagataaaataatatttaatttcacgtgatagggttacatggtaaaataagttttagttgatattaatatagaatgata  17468800                                                                    ----------->GT1                                                                    <---------ANAC46          -------                                                                  <-------MYC2              ---------                                                                  ------->MYC3              ---------                                                                  <-------MYC3            --------->AHL20(1)                                                                  ------->MYC2           --------->YAB1                                                                ------->TEIL             --------->AHL20(2)                                                             --------->ANAC58           <---------AHL20(2)               --------->TOE2(3)                             --------->ANAC58       --------->AHL20(2)             <---------ARR11(3)                              --------->ANAC46       <---------AHL20(2)             --------->GLK1(2)                             --------->CCA1(2)    --------->AHL20(2) <-             --------->ARR11(3)                           <---------ARR14(2)    <---------AHL20(2) --       --------->ANAC46                                   --------->ARR14(2)  --------->AHL20(2)  ---       --------->ANAC58                                --------->AHL20(2)    <---------AHL20(1)   --- ->YAB1--------->ANAC58    <----------ID1            <---------AHL20(2)      --------->AHL20(1)   <-- -----------GT1--------->TOE1(3)    <-------TEIL     --------->AHL20(2)     --------->AHL20(2)<------   tataactatacgcaaaatcttaaaatttgaagacaaaattcatttttgttgataaaaaaatatacgcatgtggtataaatatatatataaataatattaa  17468900                                                --------->WOX13(1)                                              ------------>CBF                                              --------->WRKY18(1)                                           --------->DEAR3(1)                                         --------->ABI4(1)                                         ------>NtERF2                                        --------->DEAR3(1)                                        ------->GAMYB                                        <---------ALFIN1                                        --------->DREB2C(2)       <---------AHL20(2)              --------->DEAR3(2)       <---------AHL20(1)              --------->DEAR4(2)    <---------AHL20(2)                 --------->MYB46(3)    --------->AHL20(2)                 <---------MYB55(2)                              <---------ANAC58    --------->AHL20(1)                ------>MYB46(1)                                  <---------ANAC58 -->AHL20(2)                          ------>MYB83                                    --------->ZAT18 >TOE2(3)                            --------->MYB55(1)              <---------YAB1<---------ANAC58 >YAB1 --------->AHL20(1)            --------->ANAC46               <------------CBF  <---------ZAT18 --------AHL20(2)                    <---------ALFIN1             <---------YAB1   <---------ANAC58 ------->AHL20(2)                   --------->MYB46(3)           <---------GLK1(2) <------------CBF ------>AHL20(2)                    ------->GAMYB         <-------TEIL--------->YAB1<---------WOX13(1) ------>YAB1            --------->YAB1<---------ATERF1(1) <---------ZAT18         --------->ATHB12 -------AHL20(2)<----------DOF2     <---------MYB55(2)    --------->ZAT18        <---------YAB1   <-- ---AHL20(2) <-----------GT1      --------->ANAC46    <-----------RAV1(1)  --------->ICU4         <--   ttaaaataaaatatttcactttctaatgaaaacttcaacccaccgccggtcaatctctggtgcattagattattgtaatgagtttgattgcgctcgtttc  17469000                                       --------->WOX13(1)                                     <---------ATHB12                                    ------->TEIL                                       <---------ANAC58                                    ------------------------>ANAC81                    <---------ANAC58                               --------->YAB1                                       <----------DOF2      <------------CBF        <---------YAB1              --------->CCA1(2)     <-----------GT1 -------DAG2             <-----------GT1             ---------->DOF2---------->DOF2<---------DAG2 --- --------DOF2       <-------GAMYB<---------YAB1 ---------->DOF2<----------ID1 <-------TEIL      -----   ctttttgaaattgtgaacatgtcgttgttactatcatgaatcattcaaacaaaagaaaagaaatgggaacaaaagagagattcaacctttcttggcacta  17469100                                                                               --------->MYB46(3)                                                                               --------->REM1(1)                                                                             ----------->RAV1(1)                                                                           --------->LBD16                                                                          <---------ANAC55(2)                                                                          --------->ANAC55(2)                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                  <---------MYB46(3)                                   <---------ARR14(2)        ----                <-------MYC3                                       <---------ANAC58             -----                ------->MYC3                                       <---------ANAC58            <-----        <------------CBF                                          <---------ZAT2    ------------>CBF-  <---------TOE2(3)                                      <---------ALFIN1<---------LBD16      ------- ------>YAB1   --------->O2                         <-----------HVH21  --------->ARR14(2)     ------- ------->CBF   <---------O2     <-----------GT1 --------->MYB52(1)--------->ZAT2   ----------->RAV1(1)   caataaggcttattgccacgttgttggcactatttttctcttctctcttctaccggtcatcacctccttgctggatccgcaacaacaacaatggccaagt  17469200      <------NtERF2     ------>NtERF2    ----------->HVH21    --------->At1g77200    --------->DEAR3(1)    --------->DREB2C(2)    --------->RAP2.3(3)                                                      <---------ANAC55(1)    --------->RAP2.3(2)                                                      <---------TGA1a   --------->RAP2.3(1)               --------->RAP2.6(2)                     <---------ANAC58   --------->ORA47(2)                ------>NtERF2                           --------->O2   <------NtERF2                    <---------RAP2.6(2)                      --------->ANAC55(2)   --------->ATERF1(1)              <---------DEAR3(1)                       <---------ANAC55(2)   --------->ERF1                   <---------ATERF1(2)                      --------->TGA1a   --------->DEAR3(2)               --------->ATERF1(2)          <-----------HVH21   --------->RRTF1(1)          <---------ANAC58                 ------>ZmHOX2a(2)      ----------->ARR10  <---------ATERF1(1)          <---------ANAC58            <---------ATHB12  <---------O2 ------->GAMYB             <---------ANAC58            <---------ATHB12      <---------ANAC46 ------>DOF2               <---------ANAC58           ------>MYB83           <---------ANAC58     --- ---->WRKY18(1)           <---------ZAT2              ------>MYB46(1)       <-------TEIL          <-- ------HVH21              --------->ZAT2              --------->ANAC46    <---------ARR14(2)  <------NtERF2 -------->MYB46(3)  <---------DEAR3(1)<------NtERF2<------NtERF2--------->YAB1 --------->ALFIN1  ---- -->ANAC58     <---------ARR11(3)  --------->RAP2.6(3)--------->ANAC58    --------->ARR14(2)  <------ -->ANAC58     --------->ARR11(3) <---------ATERF1(1) --------->ANAC58  <---------ETT(2)     <-------   caagcgccgacgatgaagagcttcggcgagcttgcgaggcggcaatcgaaggcaccaagcaatcgatcgtcatgtcgatacgtgtggccaagagtcgcgg  17469300            <---------HSFB2a(2)                                         --------->TOE2(3)        --------->ANAC58                                                <---------MYB59 ------>MYB55(2)         <---------ETT(2)                               --------->TOE1(3)        <--- -------MYB46(3)     --------->MYB59                         --------->LBD16                    >>>>> ----->ALFIN1----------->GT1                  --------->GLK1(1)----------->HVH21              <------ ---DEAR3(1)--------->HSFB2a(2)  ----------->GT1        <----------DOF2 <---------DAG2     <--------- --LBD16--------->ANAC58 --------->ETT(2)  --------->LBD16 <---------LBD16        <<<<<<<<<TBF1------   tgtttggggcaagtctggaaaattgggtcgacaaatggctaaacccagagttctcgctctttccggtgatagaaccttaccttcttcttctctcttttga  17469400                                                                                     <---------TOE2(3)                                                                                  --------->ICU4                                                                                  <---------YAB1                                                                             ----------->GT1                                                   <---------WOX13(1)      <-------TEIL   <---------YAB1                                 <---------ANAC58        --------->ARR14(1) ------WOX13(1)             <---------AHL20(2)    <---------ANAC58       --------->ARR11(1) >>>>ARR2               <---------AHL20(2)       <---------MYB46(3)      <---------ARR14(2)       --- ---YAB1             <----------DOF2             --------->ATHB12        <---------GLK1(2)        <-- -DOF2            <-----------GT1               --------->WRKY38(1)      --------->ARR14(2)       --- --->ATHB12 <-------TEIL--------->AHL20(2)   <---------ANAC46          ----------->ARR10         <---   ttgttctgatttgattcatttcacttttaattacttcgaccttcttcgcgttgattggctagttctaagcatttagattcggtgattatggaatttagag  17469500                                                                                            ---------                                                                            ------>ZmHOX2a(1)  ------                                                           <---------At4g35610             <---------ARR14(2)                                                           --------->At4g35610             --------->ARR14(2)                                                     <-----------HVH21      --------->LBD16<---------GLK1(2)                                                    <---------TGA1a       ----------->RAV1(2)  <-----                                                    =============================================bZIP_DOF                                                    --------->O2          ===================RAV <--- ------>ARR14(2)                                    <---------O2    <------MYB83 ----------->RAV1(1) -------ARR14(2)                                    --------->TGA1a <------MYB46(1)       <------ZmHOX2a(1) ------>GLK1(2)            <-----------GT1     <---------YAB1      <---------TOE2(3)   --------->DAG2 ------GLK1(2)          --------->GLK1(2)   <---------AHL20(2)     --------->MYB59    ---------->DOF2   aatctgttgaatactaaatcgatgaaattctactgttcttggccattttatgactcgtgagagctcaattaggttttcctgagcaacaaaaaggattctg  17469600          <------MYB46(1)          <---------ANAC55(2)          <---------ANAC46          <------MYB83          ----------->GT1          --------->At4g35610         --------->MYB111(2)         --------->MYB46(2)         --------->MYB111(1)         --------->MYB52(2)            <-----------ARR10        <---------MYB55(1)             <---------ARR14(2)                                     <------       <---------MYB52(1)              --------->GLK1(2)                            <---------ALFIN1      <-----------HVH21            <------ZmHOX2a(1)                --------->CCA1(2)        --------      <-------GAMYB       --------->ZAT14                          <---------ARR14(2)        --------     <---------MYB46(3)   <---------ZAT18                          --------->ARR11(1)  ------->MYC3 >GLK1(2)--------->MYB59  --------->ZAT18           <---------YAB1 --------->ARR11(3)  <-------MYC3 --->HSFB2a(2)            <---------ZAT14           --------->ICU4 --------->ARR14(2) --------->ANAC46 ----HSFB2a(2)           <---------ZAT6--------->ARR14(2)          <---------ARR11(3) --------->O2 ------MYB52(1)   --------->WOX13(1)  <---------GLK1(2)      --------->ALFIN1      ------>ZmHOX2a(2)   gtagtgtctgttaggtgaatcaatctagtgtactcgaggagaatctgtgttgttatgattcaagtggaagatatgtttactctgatccacgtttcaagca  17469700  Previous    Next  AGI:  At1g47560.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61239.1); similar to roothairless 1 [Zea mays] (GB:AAQ81632.1); similar to roothairless 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97707.1); contains domain EXOCYST COMPLEX COMPONENT SEC3 (PTHR16092:SF1); contains domain SEC3/SYNTAXIN-RELATED (PTHR16092) Range:  from: 17469191    to: 17475800    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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