Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->YAB1                                     <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)       --------->ATHB12 <---------AHL20(2)                                                    <------      <---------YAB1    --------->AHL20(2)                                                    <------ --------AHL20(2)      <---------AHL20(2)                                                     <------ ------AHL20(2)        <---------AHL20(1)                      <-----------GT1               <------- -----AHL20(1)         --------->AHL20(2)          <---------AHL20(2)                 <---------AHL20(2) ---->AHL20(1)      --------->AHL20(2)          <---------ARR11(3)                    <---------ICU4 ----AHL20(2)       <---------AHL20(2)          <---------AHL20(1)                   --------->AHL20(2) --AHL20(2) <---------At5g28300  ----------->GT1--------->ARR11(3)                   <---------ATHB12 ->AHL20(2)<-----------GT1  <---------AHL20(2)  --------->AHL20(1)       --------->YAB1  <---------ICU4   tattttttatgatttacagttttaaattatttaaaccgataatattcaaatattttttttgaagtttacatttcatcaaaataactaataaatattgcgt  17424500    --------->TOE1(3)                                               --------->MYB52(1)    --------->TOE2(3)           <---------YAB1             <---------YAB1    <---------MYB59            <---------ARR11(3)     <---------ARR11(3) ---ANAC58                     --------->AHL20(1)     --------->GLK1(2)------->GAMYB ---ANAC58        <---------AHL20(2)         ----------->GT1--------->AHL20(2) ---ANAC46  <----------DOF2    <---------AHL20(1)     --------->ARR11(3)                       ------ ----------------TaNAC69(2)    --------->ARR11(3)    --------->RVE1(1)--------->MYB46(3)      -------   agataacctaaaaactttattttaaaaaacaaatatttttgaaaaacaagataaaaaatctattatttagtaacagacagagtagcatattaagttccta  17424600                                 ------>ZmHOX2a(2)         <---------ALFIN1    <---------YAB1                                                     <---- --------->At4g35610     --------->YAB1                                                     --------- <---------At4g35610     --------->AHL20(2)                                                 <-------- >ZmHOX2a(1)        ====================HOX2a_HOX2a                      <---------------------WRI1-- -------------->WRI1------>ZmHOX2a(1) --------->AHL20(2)           <-------TEIL             ---------   gggagcttcacacacattggtcctgaataatatgatccaaataaacatgaaataaactgagcatgtaaatgcatgggccatgtatacaatacagagcaga  17424700  ---------->DOF2 -----ARR14(2)                              --------->AHL20(2)                                  <---- >At4g35610                     --------->At4g35610                     <---------ICU4      <-------- -At4g35610                     ----------->RAV1(2)        --------->YAB1                   --------- ------->AtLEC2             ------->TEIL --------->ANAC55(2)           <---------YAB1       <-------- >ZAT14                  <---------YAB1  <---------ANAC55(2)         --------->YAB1   ----------->GT1   catggaaagttggaaacatatggaagtatgaatcacctggattacataatatactcagacatcataaaacatcatcattccatttttgaagtaaaaaatt  17424800                                                           ----------->GT1 <---------ALFIN1    <----------ID1                 <---------AHL20(2)                  <---------DAG2 -------GT1   --------->AHL20(2)                    ----------->TBP                     *TSS -AHL20(1)    <---------AHL20(2)                    --------->AHL20(2)               --------->ANAC46 >AHL20(2) <---------ARR11(3)                     ----------->TBP               <-----------GT1 -AHL20(2) --------->ARR11(3)                <-----------GT1      <-----------GT1    <---------ALFIN1   tccccacattttagattttatttaagacaaatgctcttctcttgtattttctatataaatatcgaaaatcacattcttctagtttccacaccttatgttc  17424900                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------                    <----------DOF2                                                           -------                 <---------AHL20(2)                                        <-----------GT1   <-------             <---------AHL20(2)                               <---------GLK1(2)          <-----------HVH21       <---------ALFIN1                   <-----------GT1  --------->ANAC55(2)        <----------DOF2     ----------->RAV1(1)      ---------->DOF2            <-----------GT1 <---------AHL20(2)  <------NtERF2   tccaatccaacacatatattttctttcacaaaaaaagacatattttaccttgttttgttttacatattcttatattttatcgatttgtctttgtccccgg  17425000                                                                        <------ZmHOX2a(1) >NtERF2                                  <---------ANAC58  <---------ANAC46 ----ATERF1(1)                            <---------ANAC58  <---------ANAC58 --->LBD16                          <---------AHL20(2)      <---------AtLEC2 -->LBD16                      <-------TEIL          <---------MYB46(3)--------->ANAC46 -->ANAC46                  --------->REM1(1)    <---------AtMYB61<---------GLK1(1) --LBD16            --------->MYB52(2) <-----------GT1      <---------ANAC58   ctcatgggaatgtcgaataggtcagtttctacatccatttttttccttgcattggtggttttgcatggaattcaggacacagaagagagacatttgaaaa  17425100                                                                            --------->ALFIN1                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                       --------->ANAC46                                                                      <---------LBD16                                                                    <---------REM1(2)                                                 ------>ZmHOX2a(1)<---------ARR14(2)     <---------MYB52(1)                  <------NtERF2            --------->ARR14(2)------>ZmHOX2a(1)    --------->TOE2(3)                 ------>NtERF2        <-----------HVH21<------NtERF2   <------ZmHOX2a(1)   ctacttcgttagagattgagggaatttataaaaaaactgaggccgagcatcctagcattgtggtcacatatacacggcgtggtgtccttcagaaggaggt  17425200                                                                                                    -                                                                                             --------                                       --------->MYB46(3)                                   <--------                                    <---------ARR14(2)                                     --------->ANAC46                                    --------->ARR14(2)                                     --------->ANAC58                                  --------->LBD16                                          --------->ANAC55(1)                <----------DOF2  <---------HSFB2a(2)                      --------->ATHB12 --------->ANAC55(2)         ----------->RAV1(1)     --------->LBD16                    ------>NtERF2          <---------ANAC55(2)         <---------ALFIN1        --------->HSFB2a(2)                ----------->RAV1(1)    --------->ANAC58      --------->ANAC58          <---------LBD16                    <---------ETT(2)       --------->SPL7      --------->ANAC46       --------->ARR14(2)       <---------ZAT18<------NtERF2      --------->TOE2(2)      --------->ANAC58       <---------ARR14(2) <---------ANAC58   --------->ETT(2)    --------->YAB1    <---------ALFIN1      --------->MYB46(3)    <---------ANAC58   ----------->HVH21<---------CCA1(2)   <---------ZAT18      ================================RAV  --------->MYB52(1)   --------->YAB1-----   --------->MYB46(3)   ----------->RAV1(1) <-----------RAV1(2) ------->GAMYB    <------ZmHOX2a(2)<--   cattgcccaccccacagactttaggccaacaaatcccggaaacagcccaggcgttggacactctaacgggcgacattgattcgatcatatcatacgtcat  17425300    <---------CCA1(2) -------->TOE2(3)                                                                                  <- ->TGA2(2)                                                                  <---------DAG2       ---- ---TGA1                                                       <---------MYB46(3)<---------ICU4>>>>>> ---->ICU4  ----------->GT1   <---------YAB1           ---------->DOF2      <----------DOF2    <----- -------ARR11(3)          ------->TEIL     ---------->ID1     --------->ALFIN1  <---------YAB1-------   aatcttatatcatatagaaaattacatgtattttcattcagacttgtcttctaatgctaaaggggtgtttggacatcactttatcatttcaatgttttga  17425400  Previous    Next  AGI:  At1g47485.1    Description:  unknown protein Range:  from: 17424888    to: 17425506    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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