Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->ANAC46                                    <---------ANAC55(2)                               <---------------AtSPL3                 <---------MYB52(1)                           <-----------GT1  --------->MYB52(1)<---------------AtSPL8                        <---------ICU4  ---------->DOF2       <---------------AtSPL3                     -------->HAHB4 --------->ANAC58          --------------->AtSPL8       --------->ANAC46   ------>ZmHOX2a(1) --------->YAB1 --------->ANAC58       <---------YAB1                  --------->ANAC58 >TOE1(2)           <---------YAB1  --------->ANAC55(2)    <---------AHL20(2)              --------->ANAC58 >TOE2(2)        >>>>>>>>>GT-1 --------------->AtSPL8   <---------AHL20(2)              ------>ZmHOX2a(2) >TOE1(3)     <---------MYB46(3)   ------->TEIL         --------->AHL20(2)      ===============HOX2a_HOX2a >TOE2(3)     ----------->GT1 <----------DOF2   ----------->GT1  <-----------GT1------>ZmHOX2a(1)   acttcctacttcttagtggttaataatagttactttgtacgtaaaagaacgggtgaatttttttattgtaccgttttctgtccttgctgatcgacgcaaa  17362800                     <-----------HVH21                  <---------ANAC58                  <---------ANAC55(2)                  <---------ANAC58                           --------->KAN4(1)                   <---                  <---------ANAC55(1)                   --------->ANAC58                  --------->ZAT18                  --------->ANAC55(2)                   --------->ANAC58       <---------At4g35610                  <---------ANAC46             <-----------HVH21               --------->At4g35610                 <---------LBD16--------->ATHB12   --------->ANAC46       --------->ALFIN1<---------ZAT18                <-----------GT1<---------YAB1 --------->ANAC46   <---------MYB46(3) <----------DOF2   ccttgttcgtcattcgtattacgggtcactattttgatttgctcatccccttcacgagaagcaatattcgttggaggtgtttgctgctctagtgaacgag  17362900                                                                               --------->MYB55(2)                                                                               <---------REM1(1)                                                                               <---------MYB46(3)                                                          ----------->RAV1(2)<-------GAMYB                                                     --------->ZAT2         <---------MYB46(3)                                                     --------->At4g35610 ------------>AtMYB77                                                  --------->At4g35610   ----------->HVH21                                                  <---------At4g35610  --------->HSFB2a(2)                            <---------bZIP60(1)   <---------HSFC1(2)   <---------HSFB2a(2)          ---------->DOF2   --------->bZIP60(1)   --------->HSFC1(2)   --------->LBD16            ---   <---------ZAT6        ----------->HVH21       --------->GLK1(2) --------->DEAR3(1)         <------ ---ZmHOX2a(1)         <---------At4g35610  ---------->DOF2       --------->ATERF1(1)       ---------   gacgagtgttagtaaagttccatgaggctgacctcatttgtttctcaaaagaagctgctcgcctgtgagcctccgagacggttgtagggtcgaattgtga  17363000                                                                                               <-----                                     --------->YAB1                 --------->bZIP60(1)  <------MYB83                                <------ZmHOX2a(2)             -------->ATHB1             <------MYB46(1)                                <---------ATHB12              --------->ATHB12          --------->MYB111(1) ------->DOF2              <---------At5g28300                --------->YAB1            --------->MYB59 ----ID1                  <-----------GT1          <---------ANAC46 <---------bZIP60(1) --------->MYB46(2) -->GT1            ----------->GT1--------->WOX13(1)         <---------YAB1            <--------P   caaagaattttgtaactgagagcgtaattcaccgatcaatcttgaaacaagttgtgtctgactatcattgatgtcattaaacgtgagtagtaggtagaat  17363100       --------->ARR14(2)       <---------ARR14(2)                             <-----------GT1       --------->KAN4(2)                         ----------->GT1                          <---------TOE1(3)      <----------TaMYB80              --------->ARR11(3)                        <------------CBF<----   <---------At4g35610                <---------ARR14(2)                   <---------ANAC46 <------ZmHOX2a(1) ----GLK1(1)     --------->DEAR3(1)   <---------GLK1(2)                 --------->ALFIN1  <---------TOE2(3)   tcttcagcatattcttccacagaccgtgtttcatgtctcagattttgcaacttgttatacattatttgaaggaagtggctcatattgttcttaaggaatg  17363200                                                                           <-------MYC2                                                                           ------->MYC2                                                                           ------->MYC3                                                                           <-------MYC3                                                                           <-------PIF4                                                                           ------->PIF4                                                                           <-------PIF5                                                                           <-------MYC4                                                                          --------->O2                                                                          <---------TGA1a                                                                          ===========================bZIP_DOF                                                                          =============MYC_MYB                                                                          <---------ANAC55(2)                                                                          =============MYC_MYB                                                                          --------->TGA1a                                                                          <---------O2                                                                          --------->ANAC55(2)                                                                         ------------>OsbHLH66                                                                      --------->ANAC58                                                                      --------->ANAC58                                                               ========================MYC_MYB                                                               ========================MYC_MYB                                                               <---------ZAT2                                                               --------->ZAT2  <-------GAMYB                                                               --------->At4g35610                                                               ======================================bZIP_DOF                                                               <---------At4g35610                                                               =====================bZIP_bZIP                                                               <---------O2------->PIF5      <-------                                                               --------->TGA1a --------->REM1(2)                                                               <---------TGA1a--------->ALFIN1                                                               --------->O2------->MYC4   ---------->DOF2                                                             <-----------RAV1(2) --------->WRKY38(1) -----ARR11(3) --------->GLK1(2)----------->GT1       <------ZmHOX2a(1) <------------OsbHLH66--------   tcttaagtatgggagagactctgaagcattcagagggtttcatttcatgagttagaggaagagccaggtgagaagcacgtgtgttgactcgttgaagctg  17363300                   ----------->GT1                  --------->MYB46(2)                  --------->MYB59                --------->ARR14(2)                <---------ARR14(2)                <---------MYB52(1)               <---------ZAT2       <---------ATHB12     --------->WOX13(1)    <---------WRKY38(1)    <---------WRKY12<---------MYB52(1)   ------------>CBF<------MYB46(1)   --------->WRKY18(1)  <-----------HVH21<------MYB83                                                       <---------MYB46(3)  --------->At5g28300                            <---------ARR11(3)                <---------MYB46(3) ------->GAMYB<---------MYB46(3)              <----------DOF2             <---------YAB1 --At4g35610<---------ZAT18            ------------>CBF                --------->GLK1(2) ->At4g35610--------->ZAT18         ------>ZmHOX2a(1)   <<<<<<<<<TBF1 <---------GLK1(2)   caacggtcaatgagggcagttcggtaatttcggtgttcctctgcaattctttatcttcttcttctcttcttcgattctgttagagttgttgttgagtttg  17363400                                                                                            <--------                                                                                            <--------                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                         <---------YAB1               <---------ZAT18                                                     --------->AHL20(2)        --------->ARR11(3)                                                    <---------YAB1          <---------TOE2(3)       ---------->DOF2                          <---------WOX13(1)         ---------->DOF2  ---------       <---------ZAT14          ---------->DOF2<---------ANAC58       --------------->AGL15<---------LBD16 --------->HSFB2a(2)      <---------ZAT6       <---------ANAC58    ---------->ID1 >>>>>>>ZML2--------   tttcgagagtaaagagagagagagattagagtgagaaagctctgagattgagtgattatatgatactttgttcccattaaagttctagtggattccggag  17363500                            ----------->HVH21                          --------->LBD16                        ----------------->AGL1                        <-----------------AGL1      ------>NtERF2  <----------DOF2     --------->DEAR3(1) <---------LBD16 -ANAC46          <---------ANAC58           ----------->GT1                   <----------DOF2 -HSFB2a(2)       <---------ANAC46     --------->DOF5.7(2)                 <----------DOF2 >HSFB2a(2)       <---------ANAC58   <---------ANAC55(2)             <----------DOF2 ->LBD16     <---------REM1(1)      <-----------------------TaNAC69(2)  <-----------GT1   ataaactccgacgagatgtagcgttttccggtgaaggaaacgtgaactcgttaaacctctgtgtcaacattcttttactttctttgttacacaaatcgat  17363600                                  --------->ZAT2                                             <-------                                  --------->At4g35610                                        --------                                  <---------ZAT2                  <---------YAB1         <---------At4g35610                                  <---------At4g35610           ----------->GT1          <---------LBD16                                <---------ZAT14               <------------CBF        ---------->DOF2                                --------->ZAT18         ------>ZmHOX2a(1)            <---------MYB52(1)                             --------->MYB52(2)       <---------ICU4 <---------YAB1 <-------GAMYB                         <---------ZAT6             --------->ARR14(2)             <---------MYB46(3) --------->ANAC46       >>>>>>>>>TAC1               <---------ARR14(2)         <---------TOE2(3)   tacaaacaagagtcaagttcgaatcgagtgttagtgagctgagtttatagttcaaatccttacaaattgttattagagcttaaggtcgttaagcggattc  17363700  Previous    Next  AGI:  At1g47350.1    Description:  F-box family protein-related. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G47340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60955.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 17360887    to: 17363162    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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